{"id":"https://openalex.org/W4288690996","doi":"https://doi.org/10.1093/bioinformatics/btac534","title":"MIB2: metal ion-binding site prediction and modeling server","display_name":"MIB2: metal ion-binding site prediction and modeling server","publication_year":2022,"publication_date":"2022-07-29","ids":{"openalex":"https://openalex.org/W4288690996","doi":"https://doi.org/10.1093/bioinformatics/btac534","pmid":"https://pubmed.ncbi.nlm.nih.gov/35904542"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac534","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac534","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065352854","display_name":"Chih\u2010Hao Lu","orcid":"https://orcid.org/0000-0002-8363-6244"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chih-Hao Lu","raw_affiliation_strings":["Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University , Hsinchu 300193, Taiwan","The Ph.D. Program of Biotechnology and Biomedical industry, China Medical University , Taichung 404333, Taiwan"],"affiliations":[{"raw_affiliation_string":"Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University , Hsinchu 300193, Taiwan","institution_ids":["https://openalex.org/I148366613"]},{"raw_affiliation_string":"The Ph.D. Program of Biotechnology and Biomedical industry, China Medical University , Taichung 404333, Taiwan","institution_ids":["https://openalex.org/I184693016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100765245","display_name":"Chih-Chieh Chen","orcid":"https://orcid.org/0000-0002-5844-8428"},"institutions":[{"id":"https://openalex.org/I142974352","display_name":"National Sun Yat-sen University","ror":"https://ror.org/00mjawt10","country_code":"TW","type":"education","lineage":["https://openalex.org/I142974352"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chih-Chieh Chen","raw_affiliation_strings":["Institute of Medical Science and Technology, National Sun Yat-sen University , Kaohsiung 804201, Taiwan"],"affiliations":[{"raw_affiliation_string":"Institute of Medical Science and Technology, National Sun Yat-sen University , Kaohsiung 804201, Taiwan","institution_ids":["https://openalex.org/I142974352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101763739","display_name":"Chin\u2010Sheng Yu","orcid":"https://orcid.org/0000-0002-5205-1331"},"institutions":[{"id":"https://openalex.org/I4880106","display_name":"Feng Chia University","ror":"https://ror.org/05vhczg54","country_code":"TW","type":"education","lineage":["https://openalex.org/I4880106"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chin-Sheng Yu","raw_affiliation_strings":["Department of Information Engineering and Computer Science, Feng Chia University , Taichung 407102, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Information Engineering and Computer Science, Feng Chia University , Taichung 407102, Taiwan","institution_ids":["https://openalex.org/I4880106"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083011380","display_name":"Yen\u2010Yi Liu","orcid":"https://orcid.org/0000-0001-8386-4418"},"institutions":[{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yen-Yi Liu","raw_affiliation_strings":["Department of Public Health, China Medical University , Taichung 406040, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Public Health, China Medical University , Taichung 406040, Taiwan","institution_ids":["https://openalex.org/I184693016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108050343","display_name":"Jiajun Liu","orcid":"https://orcid.org/0009-0006-7492-7628"},"institutions":[{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jia-Jun Liu","raw_affiliation_strings":["The Ph.D. Program of Biotechnology and Biomedical industry, China Medical University , Taichung 404333, Taiwan"],"affiliations":[{"raw_affiliation_string":"The Ph.D. Program of Biotechnology and Biomedical industry, China Medical University , Taichung 404333, Taiwan","institution_ids":["https://openalex.org/I184693016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062229799","display_name":"Sung\u2010Tai Wei","orcid":null},"institutions":[{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]},{"id":"https://openalex.org/I4210126829","display_name":"China Medical University Hospital","ror":"https://ror.org/0368s4g32","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210126829"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Sung-Tai Wei","raw_affiliation_strings":["Department of Neurosurgery, China Medical University Hospital , Taichung 404332, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Neurosurgery, China Medical University Hospital , Taichung 404332, Taiwan","institution_ids":["https://openalex.org/I4210126829","https://openalex.org/I184693016"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101942297","display_name":"Yu\u2010Feng Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yu-Feng Lin","raw_affiliation_strings":["Department of Medical Laboratory Science and Biotechnology, Asia University , Taichung 413305, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Medical Laboratory Science and Biotechnology, Asia University , Taichung 413305, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5101942297"],"corresponding_institution_ids":["https://openalex.org/I143578492"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":10.5967,"has_fulltext":false,"cited_by_count":132,"citation_normalized_percentile":{"value":0.99127878,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"38","issue":"18","first_page":"4428","last_page":"4429"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6415574550628662},{"id":"https://openalex.org/keywords/template","display_name":"Template","score":0.6000036597251892},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.4892992675304413},{"id":"https://openalex.org/keywords/metal","display_name":"Metal","score":0.4686535894870758},{"id":"https://openalex.org/keywords/web-site","display_name":"Web site","score":0.4587678015232086},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.4567881226539612},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.45622971653938293},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34170371294021606},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.34103792905807495},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3242703080177307},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3230394423007965},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.3197541832923889},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.16584309935569763},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15547826886177063},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.14873239398002625},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11355644464492798},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10199987888336182}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6415574550628662},{"id":"https://openalex.org/C82714645","wikidata":"https://www.wikidata.org/wiki/Q438331","display_name":"Template","level":2,"score":0.6000036597251892},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.4892992675304413},{"id":"https://openalex.org/C544153396","wikidata":"https://www.wikidata.org/wiki/Q11426","display_name":"Metal","level":2,"score":0.4686535894870758},{"id":"https://openalex.org/C2984519610","wikidata":"https://www.wikidata.org/wiki/Q35127","display_name":"Web site","level":3,"score":0.4587678015232086},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.4567881226539612},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.45622971653938293},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34170371294021606},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.34103792905807495},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3242703080177307},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3230394423007965},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.3197541832923889},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.16584309935569763},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15547826886177063},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.14873239398002625},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11355644464492798},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10199987888336182},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008670","descriptor_name":"Metals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008670","descriptor_name":"Metals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008670","descriptor_name":"Metals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btac534","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac534","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35904542","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35904542","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3242573670","display_name":null,"funder_award_id":"CMU110-ASIA-07","funder_id":"https://openalex.org/F4320324301","funder_display_name":"China Medical University"}],"funders":[{"id":"https://openalex.org/F4320324301","display_name":"China Medical University","ror":"https://ror.org/032d4f246"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1979408959","https://openalex.org/W2043638247","https://openalex.org/W2093352801","https://openalex.org/W2099207146","https://openalex.org/W2122901524","https://openalex.org/W2472103865","https://openalex.org/W2558889343","https://openalex.org/W2593048135","https://openalex.org/W2900343982","https://openalex.org/W2921288859","https://openalex.org/W3116548791","https://openalex.org/W3211795435"],"related_works":["https://openalex.org/W3023334178","https://openalex.org/W2036923798","https://openalex.org/W2113993025","https://openalex.org/W2153414768","https://openalex.org/W2946599741","https://openalex.org/W2464070928","https://openalex.org/W2163614321","https://openalex.org/W2593264178","https://openalex.org/W3171039768","https://openalex.org/W2136856901"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":10},{"year":2025,"cited_by_count":51},{"year":2024,"cited_by_count":45},{"year":2023,"cited_by_count":25},{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-04T08:04:53.788161","created_date":"2025-10-10T00:00:00"}
