{"id":"https://openalex.org/W4289443511","doi":"https://doi.org/10.1093/bioinformatics/btac504","title":"PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes","display_name":"PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes","publication_year":2022,"publication_date":"2022-08-02","ids":{"openalex":"https://openalex.org/W4289443511","doi":"https://doi.org/10.1093/bioinformatics/btac504","pmid":"https://pubmed.ncbi.nlm.nih.gov/35916725"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac504","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac504","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/18/4412/45878364/btac504.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/18/4412/45878364/btac504.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085749572","display_name":"Alexis Dereeper","orcid":"https://orcid.org/0000-0001-8120-8409"},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210094754","display_name":"Animal, Sant\u00e9, Territoires, Risques et Ecosyst\u00e8mes","ror":"https://ror.org/006fhby04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856","https://openalex.org/I19894307","https://openalex.org/I4210088668","https://openalex.org/I4210094754","https://openalex.org/I4210147367"]},{"id":"https://openalex.org/I4210138994","display_name":"Institut Fran\u00e7ais de Bioinformatique","ror":"https://ror.org/045f7pv37","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210138994"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1327553481","https://openalex.org/I154202486","https://openalex.org/I2799535048","https://openalex.org/I2802818602","https://openalex.org/I4210088668","https://openalex.org/I4210090127","https://openalex.org/I4210113730","https://openalex.org/I4210131494","https://openalex.org/I4210166444","https://openalex.org/I4405257220"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Alexis Dereeper","raw_affiliation_strings":["CIRAD, UMR ASTRE , F-97170 Petit-Bourg, France","French Institute of Bioinformatics (IFB)\u2014South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD , F-34398 Montpellier, France","ELIXIR-FR - French Institute of Bioinformatics (France)"],"affiliations":[{"raw_affiliation_string":"CIRAD, UMR ASTRE , F-97170 Petit-Bourg, France","institution_ids":["https://openalex.org/I4210094754","https://openalex.org/I131077856"]},{"raw_affiliation_string":"French Institute of Bioinformatics (IFB)\u2014South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD , F-34398 Montpellier, France","institution_ids":["https://openalex.org/I4210138994","https://openalex.org/I4210088668","https://openalex.org/I131077856","https://openalex.org/I4210166444"]},{"raw_affiliation_string":"ELIXIR-FR - French Institute of Bioinformatics (France)","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003962508","display_name":"Marilyne Summo","orcid":"https://orcid.org/0000-0002-9308-974X"},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"government","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I4210120904","display_name":"Am\u00e9lioration G\u00e9n\u00e9tique et Adaptation des Plantes m\u00e9diterran\u00e9ennes et tropicales","ror":"https://ror.org/02w4exq36","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856","https://openalex.org/I19894307","https://openalex.org/I24906876","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210120904","https://openalex.org/I4399657933"]},{"id":"https://openalex.org/I4210138994","display_name":"Institut Fran\u00e7ais de Bioinformatique","ror":"https://ror.org/045f7pv37","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210138994"]},{"id":"https://openalex.org/I4210166444","display_name":"Institut de Recherche pour le D\u00e9veloppement","ror":"https://ror.org/05q3vnk25","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1327553481","https://openalex.org/I154202486","https://openalex.org/I2799535048","https://openalex.org/I2802818602","https://openalex.org/I4210088668","https://openalex.org/I4210090127","https://openalex.org/I4210113730","https://openalex.org/I4210131494","https://openalex.org/I4210166444","https://openalex.org/I4405257220"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marilyne Summo","raw_affiliation_strings":["CIRAD, UMR AGAP , F-34398 Montpellier, France","French Institute of Bioinformatics (IFB)\u2014South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD , F-34398 Montpellier, France"],"affiliations":[{"raw_affiliation_string":"CIRAD, UMR AGAP , F-34398 Montpellier, France","institution_ids":["https://openalex.org/I4210120904","https://openalex.org/I131077856"]},{"raw_affiliation_string":"French Institute of Bioinformatics (IFB)\u2014South Green Bioinformatics Platform, Bioversity, CIRAD, INRAE, IRD , F-34398 Montpellier, France","institution_ids":["https://openalex.org/I4210138994","https://openalex.org/I4210088668","https://openalex.org/I131077856","https://openalex.org/I4210166444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087472196","display_name":"Damien F. Meyer","orcid":"https://orcid.org/0000-0003-2735-176X"},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I4210094754","display_name":"Animal, Sant\u00e9, Territoires, Risques et Ecosyst\u00e8mes","ror":"https://ror.org/006fhby04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856","https://openalex.org/I19894307","https://openalex.org/I4210088668","https://openalex.org/I4210094754","https://openalex.org/I4210147367"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Damien F Meyer","raw_affiliation_strings":["CIRAD, UMR ASTRE , F-97170 Petit-Bourg, France"],"affiliations":[{"raw_affiliation_string":"CIRAD, UMR ASTRE , F-97170 Petit-Bourg, France","institution_ids":["https://openalex.org/I4210094754","https://openalex.org/I131077856"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5085749572"],"corresponding_institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210088668","https://openalex.org/I4210094754","https://openalex.org/I4210138994","https://openalex.org/I4210166444"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":2921,"currency":"EUR","value_usd":3150},"fwci":4.9476,"has_fulltext":true,"cited_by_count":65,"citation_normalized_percentile":{"value":0.96619064,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"38","issue":"18","first_page":"4412","last_page":"4414"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/perl","display_name":"Perl","score":0.748076319694519},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6753067970275879},{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.6423996090888977},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5948585867881775},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5459543466567993},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5129479765892029},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4932388663291931},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4855615794658661},{"id":"https://openalex.org/keywords/bacterial-genome-size","display_name":"Bacterial genome size","score":0.4814457297325134},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.42167460918426514},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4147097170352936},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.40825581550598145},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.34470728039741516},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.17375963926315308},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16219553351402283},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.11998239159584045}],"concepts":[{"id":"https://openalex.org/C2777002779","wikidata":"https://www.wikidata.org/wiki/Q42478","display_name":"Perl","level":2,"score":0.748076319694519},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6753067970275879},{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.6423996090888977},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5948585867881775},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5459543466567993},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5129479765892029},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4932388663291931},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4855615794658661},{"id":"https://openalex.org/C3742359","wikidata":"https://www.wikidata.org/wiki/Q4839988","display_name":"Bacterial genome size","level":4,"score":0.4814457297325134},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.42167460918426514},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4147097170352936},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.40825581550598145},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34470728039741516},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.17375963926315308},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16219553351402283},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.11998239159584045},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D007990","descriptor_name":"Libraries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007990","descriptor_name":"Libraries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007990","descriptor_name":"Libraries","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btac504","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac504","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/18/4412/45878364/btac504.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35916725","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35916725","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-03753511v1","is_oa":true,"landing_page_url":"https://hal.inrae.fr/hal-03753511","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2022, &#x27E8;10.1093/bioinformatics/btac504&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:agritrop.cirad.fr:603993","is_oa":true,"landing_page_url":"http://agritrop.cirad.fr/603993/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402311","display_name":"Agritrop (Cirad)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I131077856","host_organization_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","host_organization_lineage":["https://openalex.org/I131077856"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:agritrop.cirad.fr:606520","is_oa":false,"landing_page_url":"http://agritrop.cirad.fr/606520/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402311","display_name":"Agritrop (Cirad)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I131077856","host_organization_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","host_organization_lineage":["https://openalex.org/I131077856"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"16th Plant Bacteria Meeting. Abstract Booklet","raw_type":"conference_item"},{"id":"pmh:oai:pubmedcentral.nih.gov:9477528","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9477528","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac504","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac504","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/18/4412/45878364/btac504.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2260221505","display_name":null,"funder_award_id":"MALIN","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320324228","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4289443511.pdf","grobid_xml":"https://content.openalex.org/works/W4289443511.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1991330646","https://openalex.org/W2117207428","https://openalex.org/W2122673596","https://openalex.org/W2132926880","https://openalex.org/W2133790733","https://openalex.org/W2135415614","https://openalex.org/W2158804744","https://openalex.org/W2466387107","https://openalex.org/W2554414896","https://openalex.org/W2617471186","https://openalex.org/W2782987161","https://openalex.org/W2883315617","https://openalex.org/W2888560545","https://openalex.org/W2949102320","https://openalex.org/W3021348214","https://openalex.org/W3108297111","https://openalex.org/W3122627817","https://openalex.org/W3152715923","https://openalex.org/W4205745870","https://openalex.org/W6782813686"],"related_works":["https://openalex.org/W2480056510","https://openalex.org/W2412623563","https://openalex.org/W190299232","https://openalex.org/W1521481095","https://openalex.org/W594361471","https://openalex.org/W2604964690","https://openalex.org/W2417897055","https://openalex.org/W2148900177","https://openalex.org/W2950649048","https://openalex.org/W2756404354"],"abstract_inverted_index":{"PanExplorer":[0,40],"is":[1,18,37],"written":[2],"in":[3,29],"Perl":[4],"CGI":[5],"and":[6],"relies":[7],"on":[8,39],"several":[9],"JavaScript":[10],"libraries":[11],"for":[12],"visualization":[13],"(hotmap.js,":[14],"MauveViewer,":[15],"CircosJS).":[16],"It":[17],"freely":[19],"available":[20,38],"at":[21],"http://panexplorer.southgreen.fr.":[22],"The":[23],"source":[24],"code":[25],"has":[26],"been":[27],"released":[28],"a":[30],"GitHub":[31],"repository":[32],"https://github.com/SouthGreenPlatform/PanExplorer.":[33],"A":[34],"documentation":[35],"section":[36],"website.":[41]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":32},{"year":2024,"cited_by_count":23},{"year":2023,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
