{"id":"https://openalex.org/W4284969110","doi":"https://doi.org/10.1093/bioinformatics/btac491","title":"TogoID: an exploratory ID converter to bridge biological datasets","display_name":"TogoID: an exploratory ID converter to bridge biological datasets","publication_year":2022,"publication_date":"2022-07-08","ids":{"openalex":"https://openalex.org/W4284969110","doi":"https://doi.org/10.1093/bioinformatics/btac491","pmid":"https://pubmed.ncbi.nlm.nih.gov/35801937"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac491","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac491","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/17/4194/45668700/btac491.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/17/4194/45668700/btac491.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058419585","display_name":"Shuya Ikeda","orcid":"https://orcid.org/0000-0002-1357-5159"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shuya Ikeda","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0002-1357-5159","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005891911","display_name":"Hiromasa Ono","orcid":"https://orcid.org/0000-0001-8675-963X"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hiromasa Ono","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0001-8675-963X","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086059561","display_name":"Tazro Ohta","orcid":"https://orcid.org/0000-0003-3777-5945"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tazro Ohta","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0003-3777-5945","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059383385","display_name":"Hirokazu Chiba","orcid":"https://orcid.org/0000-0003-4062-8903"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hirokazu Chiba","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0003-4062-8903","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055110943","display_name":"Yuki Naito","orcid":"https://orcid.org/0000-0002-1182-6786"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuki Naito","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0002-1182-6786","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036198187","display_name":"Yuki Moriya","orcid":"https://orcid.org/0000-0001-8195-5893"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuki Moriya","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0001-8195-5893","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039336067","display_name":"Shuichi Kawashima","orcid":"https://orcid.org/0000-0001-7883-3756"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shuichi Kawashima","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0001-7883-3756","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063942302","display_name":"Yasunori Yamamoto","orcid":"https://orcid.org/0000-0002-6943-6887"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yasunori Yamamoto","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0002-6943-6887","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109529988","display_name":"Shinobu Okamoto","orcid":null},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shinobu Okamoto","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102872908","display_name":"Susumu Goto","orcid":"https://orcid.org/0000-0003-2989-8486"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Susumu Goto","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0003-2989-8486","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031153467","display_name":"Toshiaki Katayama","orcid":"https://orcid.org/0000-0003-2391-0384"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Toshiaki Katayama","raw_affiliation_strings":["Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan"],"raw_orcid":"https://orcid.org/0000-0003-2391-0384","affiliations":[{"raw_affiliation_string":"Database Center for Life Science, Joint Support-Center for Data Science Research, Research Organization of Information and Systems, University of Tokyo Kashiwanoha-campus Station Satellite 6F , Kashiwa, Chiba 277-0871, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5031153467"],"corresponding_institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I74801974"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":2.77,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.91687738,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"38","issue":"17","first_page":"4194","last_page":"4199"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.48969998955726624,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.48969998955726624,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.09969999641180038,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.08889999985694885,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bridge","display_name":"Bridge (graph theory)","score":0.8363052606582642},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6524678468704224},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5121952891349792},{"id":"https://openalex.org/keywords/exploratory-research","display_name":"Exploratory research","score":0.41654932498931885},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.132219135761261},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.109885573387146},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.04962030053138733}],"concepts":[{"id":"https://openalex.org/C100776233","wikidata":"https://www.wikidata.org/wiki/Q2532492","display_name":"Bridge (graph theory)","level":2,"score":0.8363052606582642},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6524678468704224},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5121952891349792},{"id":"https://openalex.org/C85973986","wikidata":"https://www.wikidata.org/wiki/Q1091731","display_name":"Exploratory research","level":2,"score":0.41654932498931885},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.132219135761261},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.109885573387146},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.04962030053138733},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btac491","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac491","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/17/4194/45668700/btac491.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35801937","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35801937","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9438948","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9438948","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac491","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac491","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/17/4194/45668700/btac491.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4699999988079071,"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production"}],"awards":[{"id":"https://openalex.org/G6612758263","display_name":"Systems pathology approach using deep learning to understand the effect of environmental exposure on the pathogenesis of common diseases","funder_award_id":"21H03537","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1482515444","https://openalex.org/W1493893483","https://openalex.org/W1508604947","https://openalex.org/W1935434993","https://openalex.org/W1972397861","https://openalex.org/W1979978607","https://openalex.org/W2052250375","https://openalex.org/W2096541451","https://openalex.org/W2103017472","https://openalex.org/W2103425480","https://openalex.org/W2109488005","https://openalex.org/W2120141270","https://openalex.org/W2123329045","https://openalex.org/W2125987139","https://openalex.org/W2126664691","https://openalex.org/W2165428180","https://openalex.org/W2173732482","https://openalex.org/W2898210859","https://openalex.org/W2901527454","https://openalex.org/W2906106571","https://openalex.org/W2913898479","https://openalex.org/W2944545583","https://openalex.org/W3048090444","https://openalex.org/W3095583226","https://openalex.org/W3096568637","https://openalex.org/W3112376646","https://openalex.org/W3112600195","https://openalex.org/W3165022492","https://openalex.org/W4205247356","https://openalex.org/W4210611369","https://openalex.org/W4252710376","https://openalex.org/W6628756907"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W1501776718","https://openalex.org/W2358668433","https://openalex.org/W2615136228","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W657108774","https://openalex.org/W2478288626"],"abstract_inverted_index":{"MOTIVATION:":[0],"Understanding":[1],"life":[2,22],"cannot":[3],"be":[4],"accomplished":[5],"without":[6],"making":[7],"full":[8],"use":[9],"of":[10,18,50,53,61,74,134,148,189,200],"biological":[11,51,75,115,135],"data,":[12],"which":[13],"are":[14,207],"scattered":[15],"across":[16],"databases":[17,64],"diverse":[19],"categories":[20,52],"in":[21,71,81,137],"sciences.":[23],"To":[24,130,176],"connect":[25],"such":[26,43],"data":[27,206],"seamlessly,":[28],"identifier":[29],"(ID)":[30],"conversion":[31,39,89],"plays":[32],"a":[33,47,126],"key":[34],"role.":[35],"However,":[36],"existing":[37],"ID":[38,88],"services":[40],"have":[41],"disadvantages,":[42],"as":[44],"covering":[45,113],"only":[46],"limited":[48],"range":[49],"databases,":[54],"not":[55],"keeping":[56],"up":[57],"with":[58,94],"the":[59,62,72,132,138,146,149,162,167,184,187,192,198],"updates":[60],"original":[63],"and":[65,99,166,196],"outputs":[66],"being":[67],"hard":[68],"to":[69,124,172,179],"interpret":[70],"context":[73],"relations,":[76],"especially":[77],"when":[78],"converting":[79],"IDs":[80],"multiple":[82],"steps.":[83],"RESULTS:":[84],"TogoID":[85,108,117,156,163],"is":[86,158,169],"an":[87,95,100,142],"service":[90,157],"implementing":[91],"unique":[92],"features":[93],"intuitive":[96],"web":[97],"interface":[98,103],"application":[101],"programming":[102],"(API)":[104],"for":[105],"programmatic":[106,174],"access.":[107,175],"currently":[109],"supports":[110],"65":[111],"datasets":[112],"various":[114],"categories.":[116],"users":[118],"can":[119],"perform":[120],"exploratory":[121],"multistep":[122],"conversions":[123],"find":[125],"path":[127],"among":[128],"IDs.":[129],"guide":[131],"interpretation":[133],"meanings":[136],"conversions,":[139],"we":[140],"crafted":[141],"ontology":[143],"that":[144],"defines":[145],"semantics":[147],"dataset":[150,182],"relations.":[151],"AVAILABILITY":[152],"AND":[153],"IMPLEMENTATION:":[154],"The":[155],"freely":[159],"available":[160,208],"on":[161],"website":[164],"(https://togoid.dbcls.jp/)":[165],"API":[168],"also":[170],"provided":[171],"allow":[173],"encourage":[177],"developers":[178],"add":[180],"new":[181],"pairs,":[183],"system":[185],"stores":[186],"configurations":[188],"pairs":[190],"at":[191,209],"GitHub":[193],"repository":[194],"(https://github.com/togoid/togoid-config)":[195],"accepts":[197],"request":[199],"additional":[201],"pairs.":[202],"SUPPLEMENTARY":[203],"INFORMATION:":[204],"Supplementary":[205],"Bioinformatics":[210],"online.":[211]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
