{"id":"https://openalex.org/W4296480486","doi":"https://doi.org/10.1093/bioinformatics/btac477","title":"DrDimont: explainable drug response prediction from differential analysis of multi-omics networks","display_name":"DrDimont: explainable drug response prediction from differential analysis of multi-omics networks","publication_year":2022,"publication_date":"2022-08-24","ids":{"openalex":"https://openalex.org/W4296480486","doi":"https://doi.org/10.1093/bioinformatics/btac477","pmid":"https://pubmed.ncbi.nlm.nih.gov/36124784"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac477","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac477","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/Supplement_2/ii113/45884038/btac477.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/Supplement_2/ii113/45884038/btac477.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065951049","display_name":"Pauline Hiort","orcid":"https://orcid.org/0000-0002-3530-7358"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Pauline Hiort","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062892376","display_name":"Julian Hugo","orcid":"https://orcid.org/0000-0003-3355-1071"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Julian Hugo","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091265453","display_name":"Justus Zeinert","orcid":"https://orcid.org/0000-0003-3918-0507"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Justus Zeinert","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074274278","display_name":"Nataniel M\u00fcller","orcid":null},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Nataniel M\u00fcller","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003656176","display_name":"Spoorthi Kashyap","orcid":"https://orcid.org/0000-0002-5474-8183"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Spoorthi Kashyap","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026076885","display_name":"Jagath C. Rajapakse","orcid":"https://orcid.org/0000-0001-7944-1658"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Jagath C Rajapakse","raw_affiliation_strings":["School of Computer Science and Engineering, Nanyang Technological University , Singapore 639798, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Nanyang Technological University , Singapore 639798, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050612781","display_name":"Francisco Azuaje","orcid":"https://orcid.org/0000-0002-9207-9072"},"institutions":[{"id":"https://openalex.org/I4210143578","display_name":"Genomics England","ror":"https://ror.org/04rxxfz69","country_code":"GB","type":"other","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4210143578"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Francisco Azuaje","raw_affiliation_strings":["Genomics England , London EC1M 6BQ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genomics England , London EC1M 6BQ, UK","institution_ids":["https://openalex.org/I4210143578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005996110","display_name":"Bernhard Y. Renard","orcid":"https://orcid.org/0000-0003-4589-9809"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bernhard Y Renard","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067843065","display_name":"Katharina Baum","orcid":"https://orcid.org/0000-0001-7256-0566"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Katharina Baum","raw_affiliation_strings":["Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hasso Plattner Institute, Digital Engineering Faculty, University of Potsdam , Potsdam 14482, Germany","institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5067843065"],"corresponding_institution_ids":["https://openalex.org/I143288331","https://openalex.org/I176453806"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.3465,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.55839414,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"38","issue":"Supplement_2","first_page":"ii113","last_page":"ii119"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9118000268936157,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9118000268936157,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.026000000536441803,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.009800000116229057,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6126179695129395},{"id":"https://openalex.org/keywords/drug-response","display_name":"Drug response","score":0.5551799535751343},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.5438956618309021},{"id":"https://openalex.org/keywords/differential","display_name":"Differential (mechanical device)","score":0.4872106909751892},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4749733805656433},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4508587121963501},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41073113679885864},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3704935908317566},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.334059476852417},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2660920023918152},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.09233400225639343}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6126179695129395},{"id":"https://openalex.org/C2994119904","wikidata":"https://www.wikidata.org/wiki/Q1251001","display_name":"Drug response","level":3,"score":0.5551799535751343},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.5438956618309021},{"id":"https://openalex.org/C93226319","wikidata":"https://www.wikidata.org/wiki/Q193137","display_name":"Differential (mechanical device)","level":2,"score":0.4872106909751892},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4749733805656433},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4508587121963501},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41073113679885864},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3704935908317566},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.334059476852417},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2660920023918152},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.09233400225639343},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011960","descriptor_name":"Receptors, Estrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011960","descriptor_name":"Receptors, Estrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011960","descriptor_name":"Receptors, Estrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btac477","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac477","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/Supplement_2/ii113/45884038/btac477.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36124784","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36124784","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:kobv.de-opus4-uni-potsdam:65347","is_oa":true,"landing_page_url":"https://publishup.uni-potsdam.de/frontdoor/index/index/docId/65347","pdf_url":null,"source":{"id":"https://openalex.org/S4306400594","display_name":"publish.UP (University of Potsdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I176453806","host_organization_name":"University of Potsdam","host_organization_lineage":["https://openalex.org/I176453806"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"doc-type:conferenceObject"},{"id":"pmh:oai:pubmedcentral.nih.gov:9486584","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9486584","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac477","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac477","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/Supplement_2/ii113/45884038/btac477.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.699999988079071}],"awards":[{"id":"https://openalex.org/G3227159628","display_name":null,"funder_award_id":"DFG RE3474/2-2","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4296480486.pdf","grobid_xml":"https://content.openalex.org/works/W4296480486.grobid-xml"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W229097380","https://openalex.org/W642687531","https://openalex.org/W1966327575","https://openalex.org/W1979209006","https://openalex.org/W1987219048","https://openalex.org/W2043398720","https://openalex.org/W2044055595","https://openalex.org/W2066636486","https://openalex.org/W2072816950","https://openalex.org/W2108068107","https://openalex.org/W2139132031","https://openalex.org/W2147566730","https://openalex.org/W2156178044","https://openalex.org/W2158485828","https://openalex.org/W2220553089","https://openalex.org/W2264481086","https://openalex.org/W2274879598","https://openalex.org/W2294516783","https://openalex.org/W2395887422","https://openalex.org/W2470990452","https://openalex.org/W2569335714","https://openalex.org/W2624701078","https://openalex.org/W2747036018","https://openalex.org/W2767334810","https://openalex.org/W2767593474","https://openalex.org/W2767891136","https://openalex.org/W2787897791","https://openalex.org/W2790295707","https://openalex.org/W2805406480","https://openalex.org/W2808845633","https://openalex.org/W2899866452","https://openalex.org/W2918039280","https://openalex.org/W2921921533","https://openalex.org/W2938826237","https://openalex.org/W2941275129","https://openalex.org/W2949066452","https://openalex.org/W2951531839","https://openalex.org/W2956963717","https://openalex.org/W2971832717","https://openalex.org/W2983296354","https://openalex.org/W3003893414","https://openalex.org/W3007701192","https://openalex.org/W3019897091","https://openalex.org/W3023485287","https://openalex.org/W3082153144","https://openalex.org/W3097279041","https://openalex.org/W3109164129","https://openalex.org/W3120515035","https://openalex.org/W3136516983","https://openalex.org/W3155329622","https://openalex.org/W3156270925","https://openalex.org/W3173875945","https://openalex.org/W3200052489","https://openalex.org/W3207245180","https://openalex.org/W4220920857","https://openalex.org/W6608852248","https://openalex.org/W6782444584"],"related_works":["https://openalex.org/W177137871","https://openalex.org/W4403685181","https://openalex.org/W4292302930","https://openalex.org/W4386960635","https://openalex.org/W2594649246","https://openalex.org/W2924366642","https://openalex.org/W3184567430","https://openalex.org/W4286491824","https://openalex.org/W3195112886","https://openalex.org/W2590543013"],"abstract_inverted_index":{"MOTIVATION:":[0],"While":[1],"it":[2,189],"has":[3],"been":[4,27],"well":[5],"established":[6],"that":[7,101,138],"drugs":[8],"affect":[9],"and":[10,29,78,105,162,165,170,201],"help":[11],"patients":[12],"differently,":[13],"personalized":[14],"drug":[15,83,145,153,178,210],"response":[16,62,84,154],"predictions":[17,122,132],"remain":[18],"challenging.":[19],"Solutions":[20],"based":[21,180],"on":[22,88,181,190,218],"single":[23],"omics":[24,50,99],"measurements":[25,164],"have":[26],"proposed,":[28],"networks":[30,94],"provide":[31],"means":[32],"to":[33,41,204],"incorporate":[34],"molecular":[35,89,110,136],"interactions":[36],"into":[37,81,107],"reasoning.":[38],"However,":[39],"how":[40],"integrate":[42],"the":[43,127,140],"wealth":[44],"of":[45,67,142],"information":[46,207],"contained":[47],"in":[48,155],"multiple":[49],"layers":[51,203],"still":[52],"poses":[53],"a":[54],"complex":[55],"problem.":[56],"RESULTS:":[57],"We":[58,150,198],"present":[59],"DrDimont,":[60],"Drug":[61],"prediction":[63,179],"from":[64,95,125,194],"Differential":[65,121],"analysis":[66],"multi-omics":[68,109],"networks.":[69,111,130],"It":[70,91],"allows":[71],"for":[72,208],"comparative":[73],"conclusions":[74],"between":[75],"two":[76],"conditions":[77],"translates":[79],"them":[80],"differential":[82,144,152,182],"predictions.":[85],"DrDimont":[86,174,215],"focuses":[87],"interactions.":[90],"establishes":[92],"condition-specific":[93,128],"correlation":[96],"within":[97],"an":[98],"layer":[100],"are":[102,123,133,139,225],"then":[103],"reduced":[104],"combined":[106],"heterogeneous,":[108],"A":[112],"novel":[113],"semi-local,":[114],"path-based":[115],"integration":[116],"step":[117],"ensures":[118],"integrative":[119],"conclusions.":[120],"derived":[124],"comparing":[126],"integrated":[129],"DrDimont's":[131],"explainable,":[134],"i.e.":[135],"differences":[137],"source":[141],"high":[143],"scores":[146],"can":[147],"be":[148],"retrieved.":[149],"predict":[151],"breast":[156],"cancer":[157,195],"using":[158],"transcriptomics,":[159],"proteomics,":[160],"phosphosite":[161,202],"metabolomics":[163],"contrast":[166],"estrogen":[167],"receptor":[168,171],"positive":[169],"negative":[172],"patients.":[173],"performs":[175],"better":[176],"than":[177],"protein":[183],"expression":[184],"or":[185],"PageRank":[186],"when":[187],"evaluating":[188],"ground":[191],"truth":[192],"data":[193,224],"cell":[196],"lines.":[197],"find":[199],"proteomic":[200],"carry":[205],"most":[206],"distinguishing":[209],"response.":[211],"AVAILABILITY":[212],"AND":[213],"IMPLEMENTATION:":[214],"is":[216],"available":[217,226],"CRAN:":[219],"https://cran.r-project.org/package=DrDimont.":[220],"SUPPLEMENTARY":[221],"INFORMATION:":[222],"Supplementary":[223],"at":[227],"Bioinformatics":[228],"online.":[229]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
