{"id":"https://openalex.org/W4281790896","doi":"https://doi.org/10.1093/bioinformatics/btac351","title":"Prior knowledge facilitates low homologous protein secondary structure prediction with DSM distillation","display_name":"Prior knowledge facilitates low homologous protein secondary structure prediction with DSM distillation","publication_year":2022,"publication_date":"2022-06-02","ids":{"openalex":"https://openalex.org/W4281790896","doi":"https://doi.org/10.1093/bioinformatics/btac351","pmid":"https://pubmed.ncbi.nlm.nih.gov/35652719"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac351","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac351","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100422761","display_name":"Qin Wang","orcid":"https://orcid.org/0000-0001-5442-4210"},"institutions":[{"id":"https://openalex.org/I4210099586","display_name":"Shenzhen Research Institute of Big Data","ror":"https://ror.org/00z1gwf89","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210099586"]},{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qin Wang","raw_affiliation_strings":["Shenzhen Research Institute of Big Data , Shenzhen 51800, China","The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","The Future Network of Intelligence Institute , Shenzhen 51800, China"],"affiliations":[{"raw_affiliation_string":"Shenzhen Research Institute of Big Data , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210099586"]},{"raw_affiliation_string":"The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"The Future Network of Intelligence Institute , Shenzhen 51800, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045973874","display_name":"Jun S. Wei","orcid":"https://orcid.org/0000-0002-4812-0250"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]},{"id":"https://openalex.org/I4210099586","display_name":"Shenzhen Research Institute of Big Data","ror":"https://ror.org/00z1gwf89","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210099586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Wei","raw_affiliation_strings":["Shenzhen Research Institute of Big Data , Shenzhen 51800, China","The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","The Future Network of Intelligence Institute , Shenzhen 51800, China"],"affiliations":[{"raw_affiliation_string":"Shenzhen Research Institute of Big Data , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210099586"]},{"raw_affiliation_string":"The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"The Future Network of Intelligence Institute , Shenzhen 51800, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065188938","display_name":"Yuzhe Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I4210099586","display_name":"Shenzhen Research Institute of Big Data","ror":"https://ror.org/00z1gwf89","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210099586"]},{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuzhe Zhou","raw_affiliation_strings":["Shenzhen Research Institute of Big Data , Shenzhen 51800, China","The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","The Future Network of Intelligence Institute , Shenzhen 51800, China"],"affiliations":[{"raw_affiliation_string":"Shenzhen Research Institute of Big Data , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210099586"]},{"raw_affiliation_string":"The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"The Future Network of Intelligence Institute , Shenzhen 51800, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007757141","display_name":"Mingzhi Lin","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mingzhi Lin","raw_affiliation_strings":["Zelixir Biotech , Shanghai 200030, China"],"affiliations":[{"raw_affiliation_string":"Zelixir Biotech , Shanghai 200030, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065052987","display_name":"Ruobing Ren","orcid":"https://orcid.org/0000-0003-4517-7216"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruobing Ren","raw_affiliation_strings":["Shanghai Key Laboratory of Metabolic Remodeling and Health, Institute of Metabolism and Integrative Biology, Fudan University , Shanghai 200000, China"],"affiliations":[{"raw_affiliation_string":"Shanghai Key Laboratory of Metabolic Remodeling and Health, Institute of Metabolism and Integrative Biology, Fudan University , Shanghai 200000, China","institution_ids":["https://openalex.org/I24943067"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100371324","display_name":"Sheng Wang","orcid":"https://orcid.org/0000-0003-4210-1670"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sheng Wang","raw_affiliation_strings":["Zelixir Biotech , Shanghai 200030, China"],"affiliations":[{"raw_affiliation_string":"Zelixir Biotech , Shanghai 200030, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009164482","display_name":"Shuguang Cui","orcid":"https://orcid.org/0000-0003-2608-775X"},"institutions":[{"id":"https://openalex.org/I4210099586","display_name":"Shenzhen Research Institute of Big Data","ror":"https://ror.org/00z1gwf89","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210099586"]},{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuguang Cui","raw_affiliation_strings":["Shenzhen Research Institute of Big Data , Shenzhen 51800, China","The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","The Future Network of Intelligence Institute , Shenzhen 51800, China"],"affiliations":[{"raw_affiliation_string":"Shenzhen Research Institute of Big Data , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210099586"]},{"raw_affiliation_string":"The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"The Future Network of Intelligence Institute , Shenzhen 51800, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100332625","display_name":"Zhen Li","orcid":"https://orcid.org/0000-0002-7669-2686"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]},{"id":"https://openalex.org/I4210099586","display_name":"Shenzhen Research Institute of Big Data","ror":"https://ror.org/00z1gwf89","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210099586"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhen Li","raw_affiliation_strings":["Shenzhen Research Institute of Big Data , Shenzhen 51800, China","The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","The Future Network of Intelligence Institute , Shenzhen 51800, China"],"affiliations":[{"raw_affiliation_string":"Shenzhen Research Institute of Big Data , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210099586"]},{"raw_affiliation_string":"The Chinese University of Hong Kong (Shenzhen) , Shenzhen 51800, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"The Future Network of Intelligence Institute , Shenzhen 51800, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5100332625"],"corresponding_institution_ids":["https://openalex.org/I4210099586","https://openalex.org/I4210116924"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.8578,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.70627633,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"38","issue":"14","first_page":"3574","last_page":"3581"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7392152547836304},{"id":"https://openalex.org/keywords/protein-superfamily","display_name":"Protein superfamily","score":0.6386653780937195},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5014710426330566},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.496521532535553},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36437922716140747},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.34840109944343567},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33942165970802307},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1326749622821808},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10149127244949341}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7392152547836304},{"id":"https://openalex.org/C178180057","wikidata":"https://www.wikidata.org/wiki/Q7251477","display_name":"Protein superfamily","level":3,"score":0.6386653780937195},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5014710426330566},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.496521532535553},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36437922716140747},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.34840109944343567},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33942165970802307},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1326749622821808},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10149127244949341},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D056510","descriptor_name":"Position-Specific Scoring Matrices","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056510","descriptor_name":"Position-Specific Scoring Matrices","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056510","descriptor_name":"Position-Specific Scoring Matrices","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btac351","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac351","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35652719","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35652719","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.4699999988079071}],"awards":[{"id":"https://openalex.org/G5765647807","display_name":null,"funder_award_id":"2018YFB1800800","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G663266979","display_name":null,"funder_award_id":"61931024&81922046","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W2008708467","https://openalex.org/W2055043387","https://openalex.org/W2059508494","https://openalex.org/W2102461176","https://openalex.org/W2106693479","https://openalex.org/W2126711803","https://openalex.org/W2138072853","https://openalex.org/W2151831732","https://openalex.org/W2153153865","https://openalex.org/W2158714788","https://openalex.org/W2950954328","https://openalex.org/W2963457143","https://openalex.org/W2980789587","https://openalex.org/W3146944767","https://openalex.org/W3177828909","https://openalex.org/W6638523607","https://openalex.org/W6652574002","https://openalex.org/W6679333912","https://openalex.org/W6682627296","https://openalex.org/W6742012266","https://openalex.org/W6758485811","https://openalex.org/W6771940864","https://openalex.org/W6799421183"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4224009465","https://openalex.org/W4306674287","https://openalex.org/W4286629047","https://openalex.org/W4205958290","https://openalex.org/W4384212932","https://openalex.org/W4390590544","https://openalex.org/W2096195258","https://openalex.org/W2049328731","https://openalex.org/W2170113797"],"abstract_inverted_index":{"BC40":[0],"dataset:":[1,4],"https://drive.google.com/drive/folders/15vwRoOjAkhhwfjDk6-YoKGf4JzZXIMC.":[2],"HardCase":[3],"https://drive.google.com/drive/folders/1BvduOr2b7cObUHy6GuEWk-aUkKJgzTUv.":[5],"Code:":[6],"https://github.com/qinwang-ai/DSM-Distil.":[7]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
