{"id":"https://openalex.org/W4225665657","doi":"https://doi.org/10.1093/bioinformatics/btac200","title":"TPpred-ATMV: therapeutic peptide prediction by adaptive multi-view tensor learning model","display_name":"TPpred-ATMV: therapeutic peptide prediction by adaptive multi-view tensor learning model","publication_year":2022,"publication_date":"2022-04-07","ids":{"openalex":"https://openalex.org/W4225665657","doi":"https://doi.org/10.1093/bioinformatics/btac200","pmid":"https://pubmed.ncbi.nlm.nih.gov/35561206"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac200","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac200","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101667939","display_name":"Ke Yan","orcid":"https://orcid.org/0000-0002-5326-4267"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ke Yan","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070009201","display_name":"Hongwu Lv","orcid":"https://orcid.org/0000-0002-0607-759X"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongwu Lv","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101989488","display_name":"Yichen Guo","orcid":"https://orcid.org/0000-0002-9987-8942"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yichen Guo","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031480448","display_name":"Yongyong Chen","orcid":"https://orcid.org/0000-0003-1970-1993"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]},{"id":"https://openalex.org/I4210144487","display_name":"Cloud Computing Center","ror":"https://ror.org/04aa0zm65","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210144487"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongyong Chen","raw_affiliation_strings":["Bio-Computing Research Center, Harbin Institute of Technology , Shenzhen 518055, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bio-Computing Research Center, Harbin Institute of Technology , Shenzhen 518055, China","institution_ids":["https://openalex.org/I4210144487","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102921136","display_name":"Hao Wu","orcid":"https://orcid.org/0000-0002-8738-3942"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Wu","raw_affiliation_strings":["School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100395591","display_name":"Bin Liu","orcid":"https://orcid.org/0000-0003-3685-9469"},"institutions":[{"id":"https://openalex.org/I125839683","display_name":"Beijing Institute of Technology","ror":"https://ror.org/01skt4w74","country_code":"CN","type":"education","lineage":["https://openalex.org/I125839683","https://openalex.org/I890469752"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bin Liu","raw_affiliation_strings":["Advanced Research Institute of Multidisciplinary Science, Beijing Institute of Technology , Beijing 100081, China","School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China"],"raw_orcid":"https://orcid.org/0000-0003-3685-9469","affiliations":[{"raw_affiliation_string":"Advanced Research Institute of Multidisciplinary Science, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]},{"raw_affiliation_string":"School of Computer Science and Technology, Beijing Institute of Technology , Beijing 100081, China","institution_ids":["https://openalex.org/I125839683"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100395591"],"corresponding_institution_ids":["https://openalex.org/I125839683"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":5.7919,"has_fulltext":false,"cited_by_count":73,"citation_normalized_percentile":{"value":0.97458357,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"38","issue":"10","first_page":"2712","last_page":"2718"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.4674000144004822,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.4674000144004822,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.2806999981403351,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.09809999912977219,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6952042579650879},{"id":"https://openalex.org/keywords/subspace-topology","display_name":"Subspace topology","score":0.6171118021011353},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5077810883522034},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.482665091753006},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4623369574546814},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4328421354293823},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0912930965423584}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6952042579650879},{"id":"https://openalex.org/C32834561","wikidata":"https://www.wikidata.org/wiki/Q660730","display_name":"Subspace topology","level":2,"score":0.6171118021011353},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5077810883522034},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.482665091753006},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4623369574546814},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4328421354293823},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0912930965423584},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btac200","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac200","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35561206","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35561206","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.4699999988079071}],"awards":[{"id":"https://openalex.org/G3267686570","display_name":null,"funder_award_id":"62102030","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W1854791334","https://openalex.org/W1969191557","https://openalex.org/W1992450378","https://openalex.org/W2000299206","https://openalex.org/W2038681300","https://openalex.org/W2045079045","https://openalex.org/W2070980386","https://openalex.org/W2083416546","https://openalex.org/W2097834518","https://openalex.org/W2114535505","https://openalex.org/W2117502874","https://openalex.org/W2146628513","https://openalex.org/W2187089797","https://openalex.org/W2527153419","https://openalex.org/W2576821058","https://openalex.org/W2608969085","https://openalex.org/W2747758005","https://openalex.org/W2748005921","https://openalex.org/W2778179010","https://openalex.org/W2794956775","https://openalex.org/W2806146459","https://openalex.org/W2891290193","https://openalex.org/W2900694973","https://openalex.org/W2936599975","https://openalex.org/W2946099214","https://openalex.org/W2949579163","https://openalex.org/W2953169496","https://openalex.org/W2962862931","https://openalex.org/W2969993699","https://openalex.org/W2971874382","https://openalex.org/W2972223935","https://openalex.org/W2987660980","https://openalex.org/W2999580270","https://openalex.org/W3007759740","https://openalex.org/W3009548091","https://openalex.org/W3017630416","https://openalex.org/W3041779151","https://openalex.org/W3048086963","https://openalex.org/W3088621177","https://openalex.org/W3092407503","https://openalex.org/W3110828293","https://openalex.org/W3116452748","https://openalex.org/W3129096424","https://openalex.org/W3131121088","https://openalex.org/W3142241514","https://openalex.org/W3159193120","https://openalex.org/W3160988990","https://openalex.org/W3196936178","https://openalex.org/W3202182910","https://openalex.org/W3203741962","https://openalex.org/W4200185639","https://openalex.org/W4226148785","https://openalex.org/W6754812645","https://openalex.org/W6779342232","https://openalex.org/W6792554259"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3209574120","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W4283697347"],"abstract_inverted_index":{"MOTIVATION:":[0],"Therapeutic":[1],"peptide":[2,26],"prediction":[3],"is":[4,52,78,132,157],"important":[5],"for":[6,80,143],"the":[7,44,61,73,89,101,105,118,123,130,139],"discovery":[8],"of":[9,38,47,84,147,155],"efficient":[10],"therapeutic":[11,25,39,48,62,85,148],"peptides":[12],"and":[13,91,108],"drug":[14],"development.":[15],"Researchers":[16],"have":[17],"developed":[18],"several":[19],"computational":[20,30],"methods":[21,31,142],"to":[22,42,55,59,116],"identify":[23],"different":[24,57,82],"types.":[27],"However,":[28],"these":[29],"focus":[32],"on":[33,72,95,122],"identifying":[34],"some":[35],"specific":[36],"types":[37,46,83,146],"peptides,":[40],"failing":[41],"predict":[43,60],"comprehensive":[45],"peptides.":[49,63,86,149],"Moreover,":[50],"it":[51],"still":[53],"challenging":[54],"utilize":[56,117],"properties":[58],"RESULTS:":[64],"In":[65],"this":[66],"study,":[67],"an":[68,110],"adaptive":[69],"multi-view":[70,106,112,124],"based":[71,94,121],"tensor":[74,113],"learning":[75,114],"framework":[76],"TPpred-ATMV":[77,87,131,156],"proposed":[79],"predicting":[81,144],"constructs":[88],"class":[90],"probability":[92],"information":[93],"various":[96],"sequence":[97],"features.":[98,125],"We":[99],"constructed":[100,109],"latent":[102],"subspace":[103],"among":[104],"features":[107],"auto-weighted":[111],"model":[115],"high":[119],"correlation":[120],"Experimental":[126],"results":[127],"showed":[128],"that":[129],"better":[133],"than":[134],"or":[135],"highly":[136],"comparable":[137],"with":[138],"other":[140],"state-of-the-art":[141],"eight":[145],"AVAILABILITY":[150],"AND":[151],"IMPLEMENTATION:":[152],"The":[153],"code":[154],"accessed":[158],"at:":[159],"https://github.com/cokeyk/TPpred-ATMV.":[160],"SUPPLEMENTARY":[161],"INFORMATION:":[162],"Supplementary":[163],"data":[164],"are":[165],"available":[166],"at":[167],"Bioinformatics":[168],"online.":[169]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":29},{"year":2023,"cited_by_count":22},{"year":2022,"cited_by_count":8}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2022-05-05T00:00:00"}
