{"id":"https://openalex.org/W4206722897","doi":"https://doi.org/10.1093/bioinformatics/btac006","title":"ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning","display_name":"ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning","publication_year":2022,"publication_date":"2022-01-04","ids":{"openalex":"https://openalex.org/W4206722897","doi":"https://doi.org/10.1093/bioinformatics/btac006","pmid":"https://pubmed.ncbi.nlm.nih.gov/34999757"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btac006","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac006","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/6/1514/49009647/btac006.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/6/1514/49009647/btac006.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110758704","display_name":"Lesong Wei","orcid":null},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]},{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN","JP"],"is_corresponding":false,"raw_author_name":"Lesong Wei","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","School of Software, Shandong University , Jinan, China"],"raw_orcid":"https://orcid.org/0000-0003-1444-190X","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":"School of Software, Shandong University , Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063256241","display_name":"Xiucai Ye","orcid":"https://orcid.org/0000-0002-5547-3919"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]},{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN","JP"],"is_corresponding":true,"raw_author_name":"Lesong Wei","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","School of Software, Shandong University , Jinan, China"],"raw_orcid":"https://orcid.org/0000-0003-1444-190X","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":"School of Software, Shandong University , Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038336830","display_name":"Tetsuya Sakurai","orcid":"https://orcid.org/0000-0002-5789-7547"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Xiucai Ye","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","institution_ids":["https://openalex.org/I146399215"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038336830","display_name":"Tetsuya Sakurai","orcid":"https://orcid.org/0000-0002-5789-7547"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]},{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN","JP"],"is_corresponding":false,"raw_author_name":"Tetsuya Sakurai","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","School of Mathematics and Statistics, Shandong University , Weihai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":"School of Mathematics and Statistics, Shandong University , Weihai, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100547430","display_name":"Zengchao Mu","orcid":"https://orcid.org/0000-0002-4878-2641"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zengchao Mu","raw_affiliation_strings":["School of Mathematics and Statistics, Shandong University , Weihai, China","School of Software, Shandong University , Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, Shandong University , Weihai, China","institution_ids":["https://openalex.org/I154099455"]},{"raw_affiliation_string":"School of Software, Shandong University , Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033232360","display_name":"Leyi Wei","orcid":"https://orcid.org/0000-0003-1444-190X"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]},{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN","JP"],"is_corresponding":true,"raw_author_name":"Leyi Wei","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","School of Software, Shandong University , Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":"School of Software, Shandong University , Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033232360","display_name":"Leyi Wei","orcid":"https://orcid.org/0000-0003-1444-190X"},"institutions":[{"id":"https://openalex.org/I146399215","display_name":"University of Tsukuba","ror":"https://ror.org/02956yf07","country_code":"JP","type":"education","lineage":["https://openalex.org/I146399215"]},{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN","JP"],"is_corresponding":false,"raw_author_name":"Leyi Wei","raw_affiliation_strings":["Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","School of Software, Shandong University , Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tsukuba , Tsukuba 3058577, Japan","institution_ids":["https://openalex.org/I146399215"]},{"raw_affiliation_string":"School of Software, Shandong University , Jinan, China","institution_ids":["https://openalex.org/I154099455"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5033232360","https://openalex.org/A5038336830","https://openalex.org/A5063256241"],"corresponding_institution_ids":["https://openalex.org/I146399215","https://openalex.org/I154099455"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":12.6126,"has_fulltext":true,"cited_by_count":180,"citation_normalized_percentile":{"value":0.99402316,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"38","issue":"6","first_page":"1514","last_page":"1524"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.8798653483390808},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7633692026138306},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5721572041511536},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.5464682579040527},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5153186321258545},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5075505971908569},{"id":"https://openalex.org/keywords/transfer-of-learning","display_name":"Transfer of learning","score":0.48932403326034546},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.43499213457107544},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.4245685636997223},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.4172443747520447},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.41553497314453125},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.41512274742126465},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3961884081363678},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.20063063502311707},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1464901566505432},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.12961536645889282},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.07526010274887085},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.07143136858940125},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.06934434175491333}],"concepts":[{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.8798653483390808},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7633692026138306},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5721572041511536},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.5464682579040527},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5153186321258545},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5075505971908569},{"id":"https://openalex.org/C150899416","wikidata":"https://www.wikidata.org/wiki/Q1820378","display_name":"Transfer of learning","level":2,"score":0.48932403326034546},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43499213457107544},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.4245685636997223},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.4172443747520447},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.41553497314453125},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.41512274742126465},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3961884081363678},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.20063063502311707},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1464901566505432},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.12961536645889282},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.07526010274887085},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.07143136858940125},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.06934434175491333},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btac006","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac006","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/6/1514/49009647/btac006.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34999757","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34999757","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btac006","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btac006","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/6/1514/49009647/btac006.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G172257906","display_name":null,"funder_award_id":"AJD30064","funder_id":"https://openalex.org/F4320321680","funder_display_name":"New Energy and Industrial Technology Development Organization"},{"id":"https://openalex.org/G2174740613","display_name":"Development of eigenvalue analysis methods using a quadrature-type eigensolver with nonlinear transformations","funder_award_id":"18H03250","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G2833016204","display_name":"\u57fa\u4e8e\u4eba\u5de5\u667a\u80fd\u7684\u591a\u80bd\u836f\u7269\u8bc6\u522b\u4e0e\u5206\u6790\u65b9\u6cd5\u7814\u7a76","funder_award_id":"62071278","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321680","display_name":"New Energy and Industrial Technology Development Organization","ror":"https://ror.org/0055k7a87"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"},{"id":"https://openalex.org/F4320338239","display_name":"Co-creation place formation support program","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4206722897.pdf","grobid_xml":"https://content.openalex.org/works/W4206722897.grobid-xml"},"referenced_works_count":42,"referenced_works":["https://openalex.org/W93623641","https://openalex.org/W1490324987","https://openalex.org/W1494484168","https://openalex.org/W1860382351","https://openalex.org/W1990075477","https://openalex.org/W1992450378","https://openalex.org/W2014274241","https://openalex.org/W2035014358","https://openalex.org/W2097874743","https://openalex.org/W2101291993","https://openalex.org/W2110474492","https://openalex.org/W2119597740","https://openalex.org/W2121597792","https://openalex.org/W2158714788","https://openalex.org/W2187089797","https://openalex.org/W2414031100","https://openalex.org/W2564980658","https://openalex.org/W2765935088","https://openalex.org/W2768348081","https://openalex.org/W2898402099","https://openalex.org/W2904762451","https://openalex.org/W2905629607","https://openalex.org/W2914645084","https://openalex.org/W2918063357","https://openalex.org/W2923490814","https://openalex.org/W2953561684","https://openalex.org/W2982608875","https://openalex.org/W2989977616","https://openalex.org/W2997680655","https://openalex.org/W3003038853","https://openalex.org/W3041133507","https://openalex.org/W3044326329","https://openalex.org/W3081135305","https://openalex.org/W3123040825","https://openalex.org/W3126773939","https://openalex.org/W3127297964","https://openalex.org/W3135161193","https://openalex.org/W3145990216","https://openalex.org/W3164662270","https://openalex.org/W4213345021","https://openalex.org/W6745609711","https://openalex.org/W6756936392"],"related_works":["https://openalex.org/W2595172197","https://openalex.org/W2084856301","https://openalex.org/W2127970246","https://openalex.org/W2885125400","https://openalex.org/W1989889224","https://openalex.org/W4382618745","https://openalex.org/W1973775000","https://openalex.org/W2748922771","https://openalex.org/W1987128138","https://openalex.org/W2743976221"],"abstract_inverted_index":{"MOTIVATION:":[0],"Recently,":[1],"peptides":[2,34,77],"have":[3],"emerged":[4],"as":[5,78,80,182],"a":[6,58,100,153,167,175],"promising":[7],"class":[8],"of":[9,26,76,90,185],"pharmaceuticals":[10],"for":[11,45,51],"various":[12],"diseases":[13],"treatment":[14],"poised":[15],"between":[16],"traditional":[17],"small":[18],"molecule":[19],"drugs":[20],"and":[21,41,69,87,93,111,195],"therapeutic":[22,33],"proteins.":[23,81],"However,":[24],"one":[25],"the":[27,65,74,95,112,118,128,140,161,171,183,186],"key":[28],"bottlenecks":[29],"preventing":[30],"them":[31],"from":[32],"is":[35,109,115,124,180,206],"their":[36],"toxicity":[37,47,75],"toward":[38],"human":[39],"cells,":[40],"few":[42],"available":[43,207,215],"algorithms":[44],"predicting":[46],"are":[48,214],"specially":[49],"designed":[50],"short-length":[52],"peptides.":[53],"RESULTS:":[54],"We":[55],"present":[56],"ToxIBTL,":[57],"novel":[59],"deep":[60],"learning":[61,71,103,123],"framework":[62],"by":[63,105],"utilizing":[64],"information":[66,86,96,108,114],"bottleneck":[67,97],"principle":[68,98],"transfer":[70,122,127],"to":[72,126,134,138],"predict":[73],"well":[79],"Specifically,":[82],"we":[83],"use":[84],"evolutionary":[85],"physicochemical":[88],"properties":[89],"peptide":[91,162],"sequences":[92],"integrate":[94],"into":[99],"feature":[101,141],"representation":[102,142],"scheme,":[104],"which":[106,136],"relevant":[107],"retained":[110],"redundant":[113],"minimized":[116],"in":[117,132],"obtained":[119],"features.":[120],"Moreover,":[121],"introduced":[125],"common":[129],"knowledge":[130],"contained":[131],"proteins":[133],"peptides,":[135],"aims":[137],"improve":[139],"capability.":[143],"Extensive":[144],"experimental":[145],"results":[146],"demonstrate":[147],"that":[148],"ToxIBTL":[149,194],"not":[150],"only":[151],"achieves":[152],"higher":[154],"prediction":[155],"performance":[156,169],"than":[157],"state-of-the-art":[158],"methods":[159],"on":[160,170],"dataset,":[163],"but":[164],"also":[165],"has":[166],"competitive":[168],"protein":[172],"dataset.":[173],"Furthermore,":[174],"user-friendly":[176],"online":[177],"web":[178],"server":[179],"established":[181],"implementation":[184],"proposed":[187,193],"ToxIBTL.":[188],"AVAILABILITY":[189],"AND":[190],"IMPLEMENTATION:":[191],"The":[192],"data":[196,213],"can":[197],"be":[198],"freely":[199],"accessible":[200],"at":[201,208,216],"http://server.wei-group.net/ToxIBTL.":[202],"Our":[203],"source":[204],"code":[205],"https://github.com/WLYLab/ToxIBTL.":[209],"SUPPLEMENTARY":[210],"INFORMATION:":[211],"Supplementary":[212],"Bioinformatics":[217],"online.":[218]},"counts_by_year":[{"year":2026,"cited_by_count":19},{"year":2025,"cited_by_count":47},{"year":2024,"cited_by_count":59},{"year":2023,"cited_by_count":39},{"year":2022,"cited_by_count":16}],"updated_date":"2026-07-18T07:39:51.176621","created_date":"2022-01-25T00:00:00"}
