{"id":"https://openalex.org/W4225527472","doi":"https://doi.org/10.1093/bioinformatics/btab846","title":"InterARTIC: an interactive web application for whole-genome nanopore sequencing analysis of SARS-CoV-2 and other viruses","display_name":"InterARTIC: an interactive web application for whole-genome nanopore sequencing analysis of SARS-CoV-2 and other viruses","publication_year":2021,"publication_date":"2021-12-12","ids":{"openalex":"https://openalex.org/W4225527472","doi":"https://doi.org/10.1093/bioinformatics/btab846","pmid":"https://pubmed.ncbi.nlm.nih.gov/34908106"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab846","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab846","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/5/1443/42420047/btab846.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/5/1443/42420047/btab846.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057516319","display_name":"James M. Ferguson","orcid":"https://orcid.org/0000-0002-6192-6937"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"James M Ferguson","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050266267","display_name":"Hasindu Gamaarachchi","orcid":"https://orcid.org/0000-0002-9034-9905"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Hasindu Gamaarachchi","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100674027","display_name":"Thanh Nguyen","orcid":"https://orcid.org/0000-0003-1687-2359"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Thanh Nguyen","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069052794","display_name":"Alyne Gollon","orcid":"https://orcid.org/0000-0003-3916-040X"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Alyne Gollon","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078332641","display_name":"Stephanie Tong","orcid":"https://orcid.org/0000-0003-4160-6335"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Stephanie Tong","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089097044","display_name":"Chiara Aquilina-Reid","orcid":"https://orcid.org/0000-0003-2708-5879"},"institutions":[{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]},{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Chiara Aquilina-Reid","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041497910","display_name":"Rachel Bowen-James","orcid":"https://orcid.org/0000-0002-9062-3644"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Rachel Bowen-James","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"School of Computer Science and Engineering, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I31746571"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082250184","display_name":"Ira W. Deveson","orcid":"https://orcid.org/0000-0003-3861-0472"},"institutions":[{"id":"https://openalex.org/I4210123488","display_name":"St Vincent's Clinic","ror":"https://ror.org/02rthxz10","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I4210123488"]},{"id":"https://openalex.org/I31746571","display_name":"UNSW Sydney","ror":"https://ror.org/03r8z3t63","country_code":"AU","type":"education","lineage":["https://openalex.org/I31746571"]},{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Ira W Deveson","raw_affiliation_strings":["Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","St Vincent\u2019s Clinical School, Faculty of Medicine, University of New South Wales , Sydney, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"St Vincent\u2019s Clinical School, Faculty of Medicine, University of New South Wales , Sydney, NSW, Australia","institution_ids":["https://openalex.org/I4210123488","https://openalex.org/I31746571"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5082250184"],"corresponding_institution_ids":["https://openalex.org/I136750679","https://openalex.org/I31746571","https://openalex.org/I4210123488"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.8849,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.73370278,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"38","issue":"5","first_page":"1443","last_page":"1446"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7308239340782166},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.6951658725738525},{"id":"https://openalex.org/keywords/minion","display_name":"Minion","score":0.6064349412918091},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5951529741287231},{"id":"https://openalex.org/keywords/nanopore-sequencing","display_name":"Nanopore sequencing","score":0.5818041563034058},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5787193179130554},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.522068202495575},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.48161882162094116},{"id":"https://openalex.org/keywords/os-x","display_name":"OS X","score":0.44086840748786926},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.42936205863952637},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.4270683825016022},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4186999201774597},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.40573614835739136},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3821808695793152},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2169904112815857},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20116248726844788},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10365551710128784}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7308239340782166},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.6951658725738525},{"id":"https://openalex.org/C2779927696","wikidata":"https://www.wikidata.org/wiki/Q6865654","display_name":"Minion","level":5,"score":0.6064349412918091},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5951529741287231},{"id":"https://openalex.org/C126513998","wikidata":"https://www.wikidata.org/wiki/Q8973627","display_name":"Nanopore sequencing","level":4,"score":0.5818041563034058},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5787193179130554},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.522068202495575},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.48161882162094116},{"id":"https://openalex.org/C515153823","wikidata":"https://www.wikidata.org/wiki/Q14116","display_name":"OS X","level":3,"score":0.44086840748786926},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.42936205863952637},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.4270683825016022},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4186999201774597},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.40573614835739136},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3821808695793152},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2169904112815857},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20116248726844788},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10365551710128784},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000081414","descriptor_name":"Nanopore Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081414","descriptor_name":"Nanopore Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000081414","descriptor_name":"Nanopore Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058608","descriptor_name":"Nanopores","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058608","descriptor_name":"Nanopores","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058608","descriptor_name":"Nanopores","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btab846","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab846","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/5/1443/42420047/btab846.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34908106","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34908106","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8826086","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8826086","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab846","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab846","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/5/1443/42420047/btab846.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.5699999928474426,"display_name":"Good health and well-being"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320331716","display_name":"Kinghorn Foundation","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4225527472.pdf","grobid_xml":"https://content.openalex.org/works/W4225527472.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W2259815689","https://openalex.org/W2616925143","https://openalex.org/W3006553977","https://openalex.org/W3015281372","https://openalex.org/W3015592531","https://openalex.org/W3015914307","https://openalex.org/W3022254624","https://openalex.org/W3029878358","https://openalex.org/W3042091277","https://openalex.org/W3043177992","https://openalex.org/W3064563382","https://openalex.org/W3112249938","https://openalex.org/W3119321472","https://openalex.org/W3120777475","https://openalex.org/W3127036220","https://openalex.org/W3135383916","https://openalex.org/W3168349393"],"related_works":["https://openalex.org/W2749851556","https://openalex.org/W2765793069","https://openalex.org/W4200050032","https://openalex.org/W2550586733","https://openalex.org/W2515795842","https://openalex.org/W1855401909","https://openalex.org/W3138936383","https://openalex.org/W2324462508","https://openalex.org/W2601089939","https://openalex.org/W2950902115"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":5},{"year":2021,"cited_by_count":3}],"updated_date":"2025-11-23T05:10:03.516525","created_date":"2025-10-10T00:00:00"}
