{"id":"https://openalex.org/W3108030349","doi":"https://doi.org/10.1093/bioinformatics/btab727","title":"PMLB v1.0: an open-source dataset collection for benchmarking machine learning methods","display_name":"PMLB v1.0: an open-source dataset collection for benchmarking machine learning methods","publication_year":2021,"publication_date":"2021-10-19","ids":{"openalex":"https://openalex.org/W3108030349","doi":"https://doi.org/10.1093/bioinformatics/btab727","mag":"3108030349","pmid":"https://pubmed.ncbi.nlm.nih.gov/34677586"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab727","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab727","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/878/42167734/btab727.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/878/42167734/btab727.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078589723","display_name":"Joseph D. Romano","orcid":"https://orcid.org/0000-0002-7999-4399"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph D Romano","raw_affiliation_strings":["Center of Excellence in Environmental Toxicology, University of Pennsylvania , Philadelphia, PA 19104, USA","Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":"https://orcid.org/0000-0002-7999-4399","affiliations":[{"raw_affiliation_string":"Center of Excellence in Environmental Toxicology, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070238515","display_name":"Trang T. Le","orcid":"https://orcid.org/0000-0003-3737-6565"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Trang T Le","raw_affiliation_strings":["Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002465837","display_name":"William La Cava","orcid":"https://orcid.org/0000-0002-1332-2960"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William La Cava","raw_affiliation_strings":["Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":"https://orcid.org/0000-0002-1332-2960","affiliations":[{"raw_affiliation_string":"Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012437309","display_name":"John Gregg","orcid":"https://orcid.org/0000-0002-2619-3440"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John T Gregg","raw_affiliation_strings":["Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111977759","display_name":"Daniel J. Goldberg","orcid":null},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J Goldberg","raw_affiliation_strings":["Department of Computer Science & Engineering, Washington University in St. Louis , St. Louis, MO 63130, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science & Engineering, Washington University in St. Louis , St. Louis, MO 63130, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083713995","display_name":"Praneel Chakraborty","orcid":null},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Praneel Chakraborty","raw_affiliation_strings":["School of Arts and Sciences, University of Pennsylvania , Philadelphia, PA 19104, USA","Wharton School, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Arts and Sciences, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]},{"raw_affiliation_string":"Wharton School, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090925972","display_name":"Natasha L. Ray","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natasha L Ray","raw_affiliation_strings":["Princeton Day School , Princeton, NJ 08540, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Princeton Day School , Princeton, NJ 08540, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043439179","display_name":"Daniel Himmelstein","orcid":"https://orcid.org/0000-0002-3012-7446"},"institutions":[{"id":"https://openalex.org/I2799359367","display_name":"Clinical Orthopaedics and Related Research","ror":"https://ror.org/00ky71f04","country_code":"US","type":"other","lineage":["https://openalex.org/I2799359367"]},{"id":"https://openalex.org/I4210125521","display_name":"Translational Therapeutics (United States)","ror":"https://ror.org/02z3rcy16","country_code":"US","type":"company","lineage":["https://openalex.org/I4210125521"]},{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Himmelstein","raw_affiliation_strings":["Department of Systems Pharmacology & Translational Therapeutics, University of Pennsylvania , Philadelphia, PA 19104, USA","Related Sciences , Denver, CO 80220, USA"],"raw_orcid":"https://orcid.org/0000-0002-3012-7446","affiliations":[{"raw_affiliation_string":"Department of Systems Pharmacology & Translational Therapeutics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I4210125521","https://openalex.org/I79576946"]},{"raw_affiliation_string":"Related Sciences , Denver, CO 80220, USA","institution_ids":["https://openalex.org/I2799359367"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073641543","display_name":"Weixuan Fu","orcid":"https://orcid.org/0000-0002-6434-5468"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Weixuan Fu","raw_affiliation_strings":["Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032971510","display_name":"Jason H. Moore","orcid":"https://orcid.org/0000-0002-5015-1099"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jason H Moore","raw_affiliation_strings":["Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"raw_orcid":"https://orcid.org/0000-0002-5015-1099","affiliations":[{"raw_affiliation_string":"Institute for Biomedical Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032971510"],"corresponding_institution_ids":["https://openalex.org/I79576946"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.67,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.7447598,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"38","issue":"3","first_page":"878","last_page":"880"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12535","display_name":"Machine Learning and Data Classification","score":0.250900000333786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12535","display_name":"Machine Learning and Data Classification","score":0.250900000333786,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13398","display_name":"Data Analysis with R","score":0.10869999974966049,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.07599999755620956,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.919200599193573},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.8942013382911682},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7771933674812317},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.7211638689041138},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7089855074882507},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.6463867425918579},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5557982921600342},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4577156603336334},{"id":"https://openalex.org/keywords/data-collection","display_name":"Data collection","score":0.4235299825668335},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3836900293827057},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35470786690711975},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.25574570894241333},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.19188323616981506},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.10193699598312378}],"concepts":[{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.919200599193573},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.8942013382911682},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7771933674812317},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.7211638689041138},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7089855074882507},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.6463867425918579},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5557982921600342},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4577156603336334},{"id":"https://openalex.org/C133462117","wikidata":"https://www.wikidata.org/wiki/Q4929239","display_name":"Data collection","level":2,"score":0.4235299825668335},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3836900293827057},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35470786690711975},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.25574570894241333},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19188323616981506},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.10193699598312378},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/bioinformatics/btab727","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab727","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/878/42167734/btab727.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34677586","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34677586","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:arXiv.org:2012.00058","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2012.00058","pdf_url":"https://arxiv.org/pdf/2012.00058","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:3108030349","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/2012.00058","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8756190","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8756190","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"doi:10.48550/arxiv.2012.00058","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2012.00058","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab727","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab727","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/3/878/42167734/btab727.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1026427696","display_name":null,"funder_award_id":"R00-LM013646","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G1080356687","display_name":null,"funder_award_id":"R01 LM012601","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G1210767767","display_name":null,"funder_award_id":"K99 LM012926","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G142613954","display_name":null,"funder_award_id":"R01-AI116794","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G1487388726","display_name":"Multi-objective representation learning methods for interpetable predictions of patient outcomesusing electronic health records","funder_award_id":"4r00lm012926-03","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1729898437","display_name":null,"funder_award_id":"K99 LM013646","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G2229312748","display_name":null,"funder_award_id":"R01LM010098","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G316217270","display_name":"Translational Research Training Program in Environmental Health Sciences","funder_award_id":"5t32es019851-13","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3865358185","display_name":null,"funder_award_id":"T32 HG000046","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G513283357","display_name":null,"funder_award_id":"R00-LM012926","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5419419845","display_name":"Bioinformatics Strategies for Genome Wide Association Studies","funder_award_id":"5r01lm010098-14","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G57727157","display_name":"Biomedical Computing and Informatics Strategies for Precision Medicine","funder_award_id":"5r01lm012601-04","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7029264468","display_name":null,"funder_award_id":"K99-LM012646","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G752358695","display_name":"Biomedical Computing and Informatics Strategies for Infectious Disease Research","funder_award_id":"1r01ai116794-01a1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G947847320","display_name":null,"funder_award_id":"T32-ES019851","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"},{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3108030349.pdf","grobid_xml":"https://content.openalex.org/works/W3108030349.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W2067713319","https://openalex.org/W2129018774","https://openalex.org/W2149069568","https://openalex.org/W2341844252","https://openalex.org/W2593649365","https://openalex.org/W2922985761","https://openalex.org/W2951624434","https://openalex.org/W3012414418","https://openalex.org/W6630733370","https://openalex.org/W6675354045","https://openalex.org/W6704404914"],"related_works":["https://openalex.org/W2950500938","https://openalex.org/W3207214618","https://openalex.org/W1875795450","https://openalex.org/W2070972336","https://openalex.org/W300769176","https://openalex.org/W3149123671","https://openalex.org/W3101793783","https://openalex.org/W50716606","https://openalex.org/W3163880120","https://openalex.org/W2130204178","https://openalex.org/W2219280425","https://openalex.org/W2017927916","https://openalex.org/W2963819897","https://openalex.org/W3033729787","https://openalex.org/W2129513953","https://openalex.org/W2127050919","https://openalex.org/W1748434178","https://openalex.org/W2608020720","https://openalex.org/W1972386298","https://openalex.org/W2338186671"],"abstract_inverted_index":{"MOTIVATION:":[0],"Novel":[1],"machine":[2,65],"learning":[3,66],"and":[4,67,98,111],"statistical":[5],"modeling":[6],"studies":[7],"rely":[8],"on":[9],"standardized":[10],"comparisons":[11],"to":[12,26],"existing":[13],"methods":[14,70],"using":[15],"well-studied":[16],"benchmark":[17,60],"datasets.":[18],"Few":[19],"tools":[20],"exist":[21],"that":[22,36],"provide":[23],"rapid":[24],"access":[25],"many":[27],"of":[28,47,57,79],"these":[29],"datasets":[30,61],"through":[31,106],"a":[32,77],"standardized,":[33],"user-friendly":[34],"interface":[35],"integrates":[37],"well":[38],"with":[39,85],"popular":[40],"data":[41,68],"science":[42,69],"workflows.":[43],"RESULTS:":[44],"This":[45],"release":[46],"PMLB":[48,92,102],"(Penn":[49],"Machine":[50],"Learning":[51],"Benchmarks)":[52],"provides":[53],"the":[54,86,107],"largest":[55],"collection":[56],"diverse,":[58],"public":[59],"for":[62,101],"evaluating":[63],"new":[64],"aggregated":[71],"in":[72],"one":[73],"location.":[74],"v1.0":[75],"introduces":[76],"number":[78],"critical":[80],"improvements":[81],"developed":[82],"following":[83],"discussions":[84],"open-source":[87],"community.":[88],"AVAILABILITY":[89],"AND":[90],"IMPLEMENTATION:":[91],"is":[93],"available":[94],"at":[95],"https://github.com/EpistasisLab/pmlb.":[96],"Python":[97,108],"R":[99,113],"interfaces":[100],"can":[103],"be":[104],"installed":[105],"Package":[109],"Index":[110],"Comprehensive":[112],"Archive":[114],"Network,":[115],"respectively.":[116]},"counts_by_year":[{"year":2021,"cited_by_count":4}],"updated_date":"2026-08-06T08:24:18.245995","created_date":"2025-10-10T00:00:00"}
