{"id":"https://openalex.org/W3193780421","doi":"https://doi.org/10.1093/bioinformatics/btab618","title":"Hierarchical Bayesian models of transcriptional and translational regulation processes with delays","display_name":"Hierarchical Bayesian models of transcriptional and translational regulation processes with delays","publication_year":2021,"publication_date":"2021-08-27","ids":{"openalex":"https://openalex.org/W3193780421","doi":"https://doi.org/10.1093/bioinformatics/btab618","mag":"3193780421","pmid":"https://pubmed.ncbi.nlm.nih.gov/34450624"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab618","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab618","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/1/187/49006926/btab618.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/38/1/187/49006926/btab618.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068696522","display_name":"Mark Jayson Cortez","orcid":"https://orcid.org/0000-0002-5719-1210"},"institutions":[{"id":"https://openalex.org/I120108168","display_name":"University of the Philippines Los Ba\u00f1os","ror":"https://ror.org/030s54078","country_code":"PH","type":"education","lineage":["https://openalex.org/I103911934","https://openalex.org/I120108168"]},{"id":"https://openalex.org/I44461941","display_name":"University of Houston","ror":"https://ror.org/048sx0r50","country_code":"US","type":"education","lineage":["https://openalex.org/I44461941"]}],"countries":["PH","US"],"is_corresponding":false,"raw_author_name":"Mark Jayson Cortez","raw_affiliation_strings":["Department of Mathematics, University of Houston , Houston, TX 77204, USA","Institute of Mathematical Sciences and Physics, University of the Philippines Los Ba\u00f1os , Laguna 4031, Philippines"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]},{"raw_affiliation_string":"Institute of Mathematical Sciences and Physics, University of the Philippines Los Ba\u00f1os , Laguna 4031, Philippines","institution_ids":["https://openalex.org/I120108168"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049426788","display_name":"Hyukpyo Hong","orcid":"https://orcid.org/0000-0001-7419-8345"},"institutions":[{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210104335","display_name":"Institute for Basic Science","ror":"https://ror.org/00y0zf565","country_code":"KR","type":"facility","lineage":["https://openalex.org/I4210104335"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Hyukpyo Hong","raw_affiliation_strings":["Biomedical Mathematics Group, Institute for Basic Science , Daejeon 34126, Korea","Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Korea"],"affiliations":[{"raw_affiliation_string":"Biomedical Mathematics Group, Institute for Basic Science , Daejeon 34126, Korea","institution_ids":["https://openalex.org/I4210104335"]},{"raw_affiliation_string":"Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Korea","institution_ids":["https://openalex.org/I157485424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037306919","display_name":"Boseung Choi","orcid":"https://orcid.org/0000-0001-7512-118X"},"institutions":[{"id":"https://openalex.org/I197347611","display_name":"Korea University","ror":"https://ror.org/047dqcg40","country_code":"KR","type":"education","lineage":["https://openalex.org/I197347611"]},{"id":"https://openalex.org/I4210104335","display_name":"Institute for Basic Science","ror":"https://ror.org/00y0zf565","country_code":"KR","type":"facility","lineage":["https://openalex.org/I4210104335"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Boseung Choi","raw_affiliation_strings":["Biomedical Mathematics Group, Institute for Basic Science , Daejeon 34126, Korea","Division of Big Data Science, Korea University Sejong Campus , Sejong 30019, Korea"],"affiliations":[{"raw_affiliation_string":"Biomedical Mathematics Group, Institute for Basic Science , Daejeon 34126, Korea","institution_ids":["https://openalex.org/I4210104335"]},{"raw_affiliation_string":"Division of Big Data Science, Korea University Sejong Campus , Sejong 30019, Korea","institution_ids":["https://openalex.org/I197347611"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067034493","display_name":"Jae Kyoung Kim","orcid":null},"institutions":[{"id":"https://openalex.org/I157485424","display_name":"Korea Advanced Institute of Science and Technology","ror":"https://ror.org/05apxxy63","country_code":"KR","type":"education","lineage":["https://openalex.org/I157485424"]},{"id":"https://openalex.org/I4210104335","display_name":"Institute for Basic Science","ror":"https://ror.org/00y0zf565","country_code":"KR","type":"facility","lineage":["https://openalex.org/I4210104335"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Jae Kyoung Kim","raw_affiliation_strings":["Biomedical Mathematics Group, Institute for Basic Science , Daejeon 34126, Korea","Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Korea"],"affiliations":[{"raw_affiliation_string":"Biomedical Mathematics Group, Institute for Basic Science , Daejeon 34126, Korea","institution_ids":["https://openalex.org/I4210104335"]},{"raw_affiliation_string":"Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology , Daejeon 34141, Korea","institution_ids":["https://openalex.org/I157485424"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020814624","display_name":"Kre\u0161imir Josi\u0107\u0301","orcid":"https://orcid.org/0000-0002-1975-3913"},"institutions":[{"id":"https://openalex.org/I44461941","display_name":"University of Houston","ror":"https://ror.org/048sx0r50","country_code":"US","type":"education","lineage":["https://openalex.org/I44461941"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kre\u0161imir Josi\u0107","raw_affiliation_strings":["Department of Biology and Biochemistry, University of Houston , Houston, TX 77204, USA","Department of Mathematics, University of Houston , Houston, TX 77204, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biology and Biochemistry, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]},{"raw_affiliation_string":"Department of Mathematics, University of Houston , Houston, TX 77204, USA","institution_ids":["https://openalex.org/I44461941"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5020814624","https://openalex.org/A5037306919","https://openalex.org/A5067034493"],"corresponding_institution_ids":["https://openalex.org/I157485424","https://openalex.org/I197347611","https://openalex.org/I4210104335","https://openalex.org/I44461941"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.7303,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.69230495,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"38","issue":"1","first_page":"187","last_page":"195"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.7009837627410889},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6215377449989319},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.552531898021698},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.5524387955665588},{"id":"https://openalex.org/keywords/curse-of-dimensionality","display_name":"Curse of dimensionality","score":0.5038761496543884},{"id":"https://openalex.org/keywords/bayesian-inference","display_name":"Bayesian inference","score":0.49700310826301575},{"id":"https://openalex.org/keywords/bayes-theorem","display_name":"Bayes' theorem","score":0.4726632833480835},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.4286941885948181},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3456484377384186},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3445095717906952},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.329889714717865}],"concepts":[{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.7009837627410889},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6215377449989319},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.552531898021698},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.5524387955665588},{"id":"https://openalex.org/C111030470","wikidata":"https://www.wikidata.org/wiki/Q1430460","display_name":"Curse of dimensionality","level":2,"score":0.5038761496543884},{"id":"https://openalex.org/C160234255","wikidata":"https://www.wikidata.org/wiki/Q812535","display_name":"Bayesian inference","level":3,"score":0.49700310826301575},{"id":"https://openalex.org/C207201462","wikidata":"https://www.wikidata.org/wiki/Q182505","display_name":"Bayes' theorem","level":3,"score":0.4726632833480835},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.4286941885948181},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3456484377384186},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3445095717906952},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.329889714717865},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btab618","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab618","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/1/187/49006926/btab618.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34450624","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34450624","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8696106","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8696106","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab618","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab618","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/38/1/187/49006926/btab618.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3857165377","display_name":null,"funder_award_id":"2019H1A2A1075303","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G482713564","display_name":null,"funder_award_id":"IBS-R029-C3","funder_id":"https://openalex.org/F4320326441","funder_display_name":"Institute for Basic Science"},{"id":"https://openalex.org/G6369817466","display_name":null,"funder_award_id":"RO1 GM117138","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7041694236","display_name":null,"funder_award_id":"NRF-2020R1F1A1A01066082","funder_id":"https://openalex.org/F4320322120","funder_display_name":"National Research Foundation of Korea"},{"id":"https://openalex.org/G974365529","display_name":null,"funder_award_id":"SSTF-BA1902-01","funder_id":"https://openalex.org/F4320328437","funder_display_name":"Samsung Science and Technology Foundation"}],"funders":[{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320326441","display_name":"Institute for Basic Science","ror":"https://ror.org/00y0zf565"},{"id":"https://openalex.org/F4320328437","display_name":"Samsung Science and Technology Foundation","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3193780421.pdf","grobid_xml":"https://content.openalex.org/works/W3193780421.grobid-xml"},"referenced_works_count":69,"referenced_works":["https://openalex.org/W143258407","https://openalex.org/W621546036","https://openalex.org/W1516111018","https://openalex.org/W1540505601","https://openalex.org/W1607198972","https://openalex.org/W1893911863","https://openalex.org/W1974818776","https://openalex.org/W1974934611","https://openalex.org/W1980570931","https://openalex.org/W1981354971","https://openalex.org/W1984217390","https://openalex.org/W1984429906","https://openalex.org/W2005776378","https://openalex.org/W2013324041","https://openalex.org/W2018435536","https://openalex.org/W2024137973","https://openalex.org/W2025791159","https://openalex.org/W2039006574","https://openalex.org/W2042942320","https://openalex.org/W2043938167","https://openalex.org/W2056760934","https://openalex.org/W2057107775","https://openalex.org/W2073045768","https://openalex.org/W2081970839","https://openalex.org/W2089961542","https://openalex.org/W2091198609","https://openalex.org/W2093668609","https://openalex.org/W2096705138","https://openalex.org/W2103049317","https://openalex.org/W2118889250","https://openalex.org/W2124822779","https://openalex.org/W2128043711","https://openalex.org/W2134459671","https://openalex.org/W2136771204","https://openalex.org/W2137490551","https://openalex.org/W2138309709","https://openalex.org/W2138835511","https://openalex.org/W2147323062","https://openalex.org/W2147745135","https://openalex.org/W2150879893","https://openalex.org/W2153866594","https://openalex.org/W2159500429","https://openalex.org/W2162457363","https://openalex.org/W2167244112","https://openalex.org/W2168648059","https://openalex.org/W2170366731","https://openalex.org/W2179931687","https://openalex.org/W2309771944","https://openalex.org/W2507380695","https://openalex.org/W2748084525","https://openalex.org/W2790032333","https://openalex.org/W2891471842","https://openalex.org/W2903650961","https://openalex.org/W2909373455","https://openalex.org/W2966817341","https://openalex.org/W2994626354","https://openalex.org/W3031514878","https://openalex.org/W3040005615","https://openalex.org/W3093943947","https://openalex.org/W3098928821","https://openalex.org/W3100144458","https://openalex.org/W3104272243","https://openalex.org/W3105845768","https://openalex.org/W3112752205","https://openalex.org/W3160417254","https://openalex.org/W4205814206","https://openalex.org/W4248681815","https://openalex.org/W4293052541","https://openalex.org/W6683826400"],"related_works":["https://openalex.org/W2117545158","https://openalex.org/W1919985504","https://openalex.org/W3013612038","https://openalex.org/W2407375987","https://openalex.org/W2950975704","https://openalex.org/W2010643158","https://openalex.org/W2505726097","https://openalex.org/W2106867672","https://openalex.org/W4310268968","https://openalex.org/W3081214562"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
