{"id":"https://openalex.org/W3195320902","doi":"https://doi.org/10.1093/bioinformatics/btab605","title":"A compositional mediation model for a binary outcome: Application to microbiome studies","display_name":"A compositional mediation model for a binary outcome: Application to microbiome studies","publication_year":2021,"publication_date":"2021-08-18","ids":{"openalex":"https://openalex.org/W3195320902","doi":"https://doi.org/10.1093/bioinformatics/btab605","mag":"3195320902","pmid":"https://pubmed.ncbi.nlm.nih.gov/34415327"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab605","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab605","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017839661","display_name":"Michael B. Sohn","orcid":"https://orcid.org/0000-0002-4981-8351"},"institutions":[{"id":"https://openalex.org/I5388228","display_name":"University of Rochester","ror":"https://ror.org/022kthw22","country_code":"US","type":"education","lineage":["https://openalex.org/I5388228"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michael B Sohn","raw_affiliation_strings":["Department of Biostatistics and Computational Biology, University of Rochester , Rochester, NY 14642, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics and Computational Biology, University of Rochester , Rochester, NY 14642, USA","institution_ids":["https://openalex.org/I5388228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100617402","display_name":"Jiarui Lu","orcid":"https://orcid.org/0000-0002-9771-0804"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jiarui Lu","raw_affiliation_strings":["Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082318113","display_name":"Hongzhe Li","orcid":"https://orcid.org/0000-0003-3662-3907"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongzhe Li","raw_affiliation_strings":["Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania , Philadelphia, PA 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5017839661"],"corresponding_institution_ids":["https://openalex.org/I5388228"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.5978,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.83010619,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"38","issue":"1","first_page":"16","last_page":"21"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12114","display_name":"Sensory Analysis and Statistical Methods","score":0.7368999719619751,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12114","display_name":"Sensory Analysis and Statistical Methods","score":0.7368999719619751,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10804","display_name":"Health Systems, Economic Evaluations, Quality of Life","score":0.7305999994277954,"subfield":{"id":"https://openalex.org/subfields/2002","display_name":"Economics and Econometrics"},"field":{"id":"https://openalex.org/fields/20","display_name":"Economics, Econometrics and Finance"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13569","display_name":"Microscopic Colitis","score":0.7116000056266785,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.6771436333656311},{"id":"https://openalex.org/keywords/outcome","display_name":"Outcome (game theory)","score":0.626473069190979},{"id":"https://openalex.org/keywords/mediation","display_name":"Mediation","score":0.5948068499565125},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.5733156800270081},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5682948231697083},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48924851417541504},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3214623034000397},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3088873028755188},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2868342101573944},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1498156189918518}],"concepts":[{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.6771436333656311},{"id":"https://openalex.org/C148220186","wikidata":"https://www.wikidata.org/wiki/Q7111912","display_name":"Outcome (game theory)","level":2,"score":0.626473069190979},{"id":"https://openalex.org/C179420905","wikidata":"https://www.wikidata.org/wiki/Q223871","display_name":"Mediation","level":2,"score":0.5948068499565125},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.5733156800270081},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5682948231697083},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48924851417541504},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3214623034000397},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3088873028755188},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2868342101573944},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1498156189918518},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C144237770","wikidata":"https://www.wikidata.org/wiki/Q747534","display_name":"Mathematical economics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btab605","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab605","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34415327","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34415327","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.550000011920929}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332907","display_name":"Medical Center, University of Rochester","ror":"https://ror.org/00trqv719"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1516659296","https://openalex.org/W1929501557","https://openalex.org/W1968105193","https://openalex.org/W1971440513","https://openalex.org/W1995945562","https://openalex.org/W1999471314","https://openalex.org/W2000450805","https://openalex.org/W2009754435","https://openalex.org/W2010143351","https://openalex.org/W2029607409","https://openalex.org/W2056621649","https://openalex.org/W2068719957","https://openalex.org/W2084388810","https://openalex.org/W2109416443","https://openalex.org/W2120288828","https://openalex.org/W2132617827","https://openalex.org/W2155860422","https://openalex.org/W2163903604","https://openalex.org/W2463836225","https://openalex.org/W2467200611","https://openalex.org/W2728822570","https://openalex.org/W2769145826","https://openalex.org/W2903718010","https://openalex.org/W2952076147","https://openalex.org/W2962733802","https://openalex.org/W2962797912","https://openalex.org/W2964204760","https://openalex.org/W3098536600","https://openalex.org/W3101910825","https://openalex.org/W3150893739","https://openalex.org/W4292811746","https://openalex.org/W4299542564"],"related_works":["https://openalex.org/W2978999882","https://openalex.org/W2604155846","https://openalex.org/W4390658901","https://openalex.org/W3121185202","https://openalex.org/W4393043634","https://openalex.org/W4206185765","https://openalex.org/W2900546243","https://openalex.org/W3035180550","https://openalex.org/W4388834263","https://openalex.org/W1983943311"],"abstract_inverted_index":{"Supplementary":[0],"files":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2}],"updated_date":"2026-03-05T09:29:38.588285","created_date":"2025-10-10T00:00:00"}
