{"id":"https://openalex.org/W3179455538","doi":"https://doi.org/10.1093/bioinformatics/btab263","title":"Build a better bootstrap and the RAWR shall beat a random path to your door: phylogenetic support estimation revisited","display_name":"Build a better bootstrap and the RAWR shall beat a random path to your door: phylogenetic support estimation revisited","publication_year":2021,"publication_date":"2021-04-23","ids":{"openalex":"https://openalex.org/W3179455538","doi":"https://doi.org/10.1093/bioinformatics/btab263","mag":"3179455538","pmid":"https://pubmed.ncbi.nlm.nih.gov/34252944"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab263","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab263","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/Supplement_1/i111/39620149/btab263.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/37/Supplement_1/i111/39620149/btab263.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100391812","display_name":"Wei Wang","orcid":"https://orcid.org/0000-0001-9629-5672"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei Wang","raw_affiliation_strings":["Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000626353","display_name":"Ahmad Hejasebazzi","orcid":null},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ahmad Hejasebazzi","raw_affiliation_strings":["Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050472952","display_name":"Julia Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Julia Zheng","raw_affiliation_strings":["Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA","Ecology, Evolution, and Behavior Program, Michigan State University , East Lansing, MI 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]},{"raw_affiliation_string":"Ecology, Evolution, and Behavior Program, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024445005","display_name":"Kevin J. Liu","orcid":"https://orcid.org/0000-0003-3836-3213"},"institutions":[{"id":"https://openalex.org/I87216513","display_name":"Michigan State University","ror":"https://ror.org/05hs6h993","country_code":"US","type":"education","lineage":["https://openalex.org/I87216513"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kevin J Liu","raw_affiliation_strings":["Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA","Ecology, Evolution, and Behavior Program, Michigan State University , East Lansing, MI 48824, USA","Genetics and Genome Sciences Program, Michigan State University , East Lansing, MI 48824, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]},{"raw_affiliation_string":"Ecology, Evolution, and Behavior Program, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]},{"raw_affiliation_string":"Genetics and Genome Sciences Program, Michigan State University , East Lansing, MI 48824, USA","institution_ids":["https://openalex.org/I87216513"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5024445005"],"corresponding_institution_ids":["https://openalex.org/I87216513"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.244,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.52820756,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"37","issue":"Supplement_1","first_page":"i111","last_page":"i119"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11354","display_name":"Evolution and Paleontology Studies","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/beat","display_name":"Beat (acoustics)","score":0.6571004390716553},{"id":"https://openalex.org/keywords/path","display_name":"Path (computing)","score":0.5575886368751526},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.554456353187561},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5276328921318054},{"id":"https://openalex.org/keywords/estimation","display_name":"Estimation","score":0.43862995505332947},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.40394914150238037},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.33998385071754456},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2670918107032776},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16565412282943726},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10723516345024109},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09024646878242493},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.06870776414871216},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.06682136654853821},{"id":"https://openalex.org/keywords/acoustics","display_name":"Acoustics","score":0.0640401840209961}],"concepts":[{"id":"https://openalex.org/C189809214","wikidata":"https://www.wikidata.org/wiki/Q829522","display_name":"Beat (acoustics)","level":2,"score":0.6571004390716553},{"id":"https://openalex.org/C2777735758","wikidata":"https://www.wikidata.org/wiki/Q817765","display_name":"Path (computing)","level":2,"score":0.5575886368751526},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.554456353187561},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5276328921318054},{"id":"https://openalex.org/C96250715","wikidata":"https://www.wikidata.org/wiki/Q965330","display_name":"Estimation","level":2,"score":0.43862995505332947},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.40394914150238037},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.33998385071754456},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2670918107032776},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16565412282943726},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10723516345024109},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09024646878242493},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.06870776414871216},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.06682136654853821},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0640401840209961},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btab263","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab263","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/Supplement_1/i111/39620149/btab263.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34252944","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34252944","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8336443","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8336443","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab263","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab263","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/Supplement_1/i111/39620149/btab263.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2073473582","display_name":"RESEARCH-PGR:  Transcriptional and Translational Regulation of Gene Expression by Gene Structure, Codon Usage and tRNAs in Grasses","funder_award_id":"1740874","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3460457044","display_name":null,"funder_award_id":"1737898","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3615450366","display_name":null,"funder_award_id":"DEB-1737898","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4712587193","display_name":null,"funder_award_id":"CCF-1565719","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6186646344","display_name":null,"funder_award_id":"CCF-1714417","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6606713289","display_name":null,"funder_award_id":"IOS-1740874","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6989723096","display_name":"AF:  Small:  Fast and accurate computational tools for large-scale evolutionary inference:  a phylogenetic network approach","funder_award_id":"1714417","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7509844813","display_name":"CRII: AF: Novel evolutionary models and algorithms to connect genomic sequence and phenotypic data","funder_award_id":"1565719","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3179455538.pdf","grobid_xml":"https://content.openalex.org/works/W3179455538.grobid-xml"},"referenced_works_count":60,"referenced_works":["https://openalex.org/W1844951369","https://openalex.org/W1981662601","https://openalex.org/W1983002447","https://openalex.org/W1999051528","https://openalex.org/W2002638840","https://openalex.org/W2007668764","https://openalex.org/W2007939821","https://openalex.org/W2014270275","https://openalex.org/W2016171324","https://openalex.org/W2017930713","https://openalex.org/W2021839440","https://openalex.org/W2030966943","https://openalex.org/W2039592185","https://openalex.org/W2056251063","https://openalex.org/W2070534356","https://openalex.org/W2074830661","https://openalex.org/W2078410848","https://openalex.org/W2086366527","https://openalex.org/W2098448352","https://openalex.org/W2101234009","https://openalex.org/W2101969356","https://openalex.org/W2107937072","https://openalex.org/W2108911240","https://openalex.org/W2110065044","https://openalex.org/W2110919845","https://openalex.org/W2115888213","https://openalex.org/W2117897510","https://openalex.org/W2130909239","https://openalex.org/W2141052558","https://openalex.org/W2142056356","https://openalex.org/W2144362290","https://openalex.org/W2145562754","https://openalex.org/W2145608399","https://openalex.org/W2147461064","https://openalex.org/W2150413224","https://openalex.org/W2155320525","https://openalex.org/W2157552136","https://openalex.org/W2159368494","https://openalex.org/W2159957100","https://openalex.org/W2160378127","https://openalex.org/W2162371815","https://openalex.org/W2551538042","https://openalex.org/W2766813858","https://openalex.org/W2794042050","https://openalex.org/W2801900613","https://openalex.org/W2890319301","https://openalex.org/W2912934387","https://openalex.org/W2914323505","https://openalex.org/W2950897217","https://openalex.org/W2973028429","https://openalex.org/W3004725107","https://openalex.org/W3022101186","https://openalex.org/W4212883601","https://openalex.org/W4231579661","https://openalex.org/W4254275792","https://openalex.org/W6638771720","https://openalex.org/W6660298580","https://openalex.org/W6675354045","https://openalex.org/W6749575239","https://openalex.org/W6759561016"],"related_works":["https://openalex.org/W4312203868","https://openalex.org/W2069013776","https://openalex.org/W2038264393","https://openalex.org/W2059637021","https://openalex.org/W2378282666","https://openalex.org/W4210644918","https://openalex.org/W2243442814","https://openalex.org/W2068841895","https://openalex.org/W1615360470","https://openalex.org/W3027758032"],"abstract_inverted_index":{"Data":[0],"and":[1,9],"software":[2,8],"are":[3],"publicly":[4],"available":[5],"under":[6],"open-source":[7],"open":[10],"data":[11],"licenses":[12],"at:":[13],"https://gitlab.msu.edu/liulab/RAWR-study-datasets-and-scripts.":[14]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
