{"id":"https://openalex.org/W3134592479","doi":"https://doi.org/10.1093/bioinformatics/btab141","title":"ASpli: integrative analysis of splicing landscapes through RNA-Seq assays","display_name":"ASpli: integrative analysis of splicing landscapes through RNA-Seq assays","publication_year":2021,"publication_date":"2021-02-27","ids":{"openalex":"https://openalex.org/W3134592479","doi":"https://doi.org/10.1093/bioinformatics/btab141","mag":"3134592479","pmid":"https://pubmed.ncbi.nlm.nih.gov/33677494"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab141","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab141","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046268484","display_name":"Estefan\u00eda Mancini","orcid":"https://orcid.org/0000-0002-7308-1273"},"institutions":[{"id":"https://openalex.org/I4210137962","display_name":"Centre for Genomic Regulation","ror":"https://ror.org/03wyzt892","country_code":"ES","type":"funder","lineage":["https://openalex.org/I4210132884","https://openalex.org/I4210137962","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Estefania Mancini","raw_affiliation_strings":["Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain","institution_ids":["https://openalex.org/I4210137962"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075178972","display_name":"Andr\u00e9s Rabinovich","orcid":"https://orcid.org/0000-0002-9291-9078"},"institutions":[{"id":"https://openalex.org/I2801749607","display_name":"Fundaci\u00f3n Instituto Leloir","ror":"https://ror.org/0431v7h69","country_code":"AR","type":"facility","lineage":["https://openalex.org/I2801749607"]},{"id":"https://openalex.org/I151201029","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59","country_code":"AR","type":"funder","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4387155568"]}],"countries":["AR"],"is_corresponding":false,"raw_author_name":"Andres Rabinovich","raw_affiliation_strings":["Instituto de Investigaciones Bioqu\u00edmicas de Buenos Aires, Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas (CONICET), Buenos Aires, Argentina","Integrative Systems Biology, Fundacion Instituto Leloir, Buenos Aires, Argentina"],"affiliations":[{"raw_affiliation_string":"Instituto de Investigaciones Bioqu\u00edmicas de Buenos Aires, Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas (CONICET), Buenos Aires, Argentina","institution_ids":["https://openalex.org/I151201029"]},{"raw_affiliation_string":"Integrative Systems Biology, Fundacion Instituto Leloir, Buenos Aires, Argentina","institution_ids":["https://openalex.org/I2801749607"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090711225","display_name":"Javier Iserte","orcid":"https://orcid.org/0000-0003-0056-1177"},"institutions":[{"id":"https://openalex.org/I151201029","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59","country_code":"AR","type":"funder","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4387155568"]},{"id":"https://openalex.org/I2801749607","display_name":"Fundaci\u00f3n Instituto Leloir","ror":"https://ror.org/0431v7h69","country_code":"AR","type":"facility","lineage":["https://openalex.org/I2801749607"]}],"countries":["AR"],"is_corresponding":false,"raw_author_name":"Javier Iserte","raw_affiliation_strings":["DStructural Bioinformatics, Fundacion Instituto Leloir, Buenos Aires, Argentina","Instituto de Investigaciones Bioqu\u00edmicas de Buenos Aires, Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas (CONICET), Buenos Aires, Argentina"],"affiliations":[{"raw_affiliation_string":"DStructural Bioinformatics, Fundacion Instituto Leloir, Buenos Aires, Argentina","institution_ids":["https://openalex.org/I2801749607"]},{"raw_affiliation_string":"Instituto de Investigaciones Bioqu\u00edmicas de Buenos Aires, Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas (CONICET), Buenos Aires, Argentina","institution_ids":["https://openalex.org/I151201029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057225263","display_name":"Marcelo J. Yanovsky","orcid":"https://orcid.org/0000-0002-1890-0571"},"institutions":[{"id":"https://openalex.org/I2801749607","display_name":"Fundaci\u00f3n Instituto Leloir","ror":"https://ror.org/0431v7h69","country_code":"AR","type":"facility","lineage":["https://openalex.org/I2801749607"]},{"id":"https://openalex.org/I151201029","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59","country_code":"AR","type":"funder","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4387155568"]}],"countries":["AR"],"is_corresponding":true,"raw_author_name":"Marcelo Yanovsky","raw_affiliation_strings":["Comparative Genomics of Plant Development, Fundacion Instituto Leloir , Buenos Aires, Argentina","Instituto de Investigaciones Bioqu\u00edmicas de Buenos Aires, Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas (CONICET), Buenos Aires, Argentina"],"affiliations":[{"raw_affiliation_string":"Comparative Genomics of Plant Development, Fundacion Instituto Leloir , Buenos Aires, Argentina","institution_ids":["https://openalex.org/I2801749607"]},{"raw_affiliation_string":"Instituto de Investigaciones Bioqu\u00edmicas de Buenos Aires, Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas (CONICET), Buenos Aires, Argentina","institution_ids":["https://openalex.org/I151201029"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005988020","display_name":"Ariel Chernomoretz","orcid":"https://orcid.org/0000-0003-2675-353X"},"institutions":[{"id":"https://openalex.org/I2801749607","display_name":"Fundaci\u00f3n Instituto Leloir","ror":"https://ror.org/0431v7h69","country_code":"AR","type":"facility","lineage":["https://openalex.org/I2801749607"]}],"countries":["AR"],"is_corresponding":true,"raw_author_name":"Ariel Chernomoretz","raw_affiliation_strings":["DStructural Bioinformatics, Fundacion Instituto Leloir, Buenos Aires, Argentina","Integrative Systems Biology, Fundacion Instituto Leloir, Buenos Aires, Argentina"],"affiliations":[{"raw_affiliation_string":"DStructural Bioinformatics, Fundacion Instituto Leloir, Buenos Aires, Argentina","institution_ids":["https://openalex.org/I2801749607"]},{"raw_affiliation_string":"Integrative Systems Biology, Fundacion Instituto Leloir, Buenos Aires, Argentina","institution_ids":["https://openalex.org/I2801749607"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5005988020","https://openalex.org/A5057225263"],"corresponding_institution_ids":["https://openalex.org/I151201029","https://openalex.org/I2801749607"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":4.381,"has_fulltext":false,"cited_by_count":80,"citation_normalized_percentile":{"value":0.95807052,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"37","issue":"17","first_page":"2609","last_page":"2616"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.7487866282463074},{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.6232989430427551},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6157320141792297},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5066607594490051},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.47372403740882874},{"id":"https://openalex.org/keywords/intron","display_name":"Intron","score":0.46494996547698975},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37029391527175903},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.32798606157302856},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30522873997688293},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21162664890289307},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.1973731517791748},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17870840430259705},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.09811517596244812}],"concepts":[{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.7487866282463074},{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.6232989430427551},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6157320141792297},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5066607594490051},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.47372403740882874},{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.46494996547698975},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37029391527175903},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.32798606157302856},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30522873997688293},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21162664890289307},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.1973731517791748},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17870840430259705},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.09811517596244812}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btab141","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab141","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33677494","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33677494","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.550000011920929,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G6526248759","display_name":null,"funder_award_id":"20020170100356BA","funder_id":"https://openalex.org/F4320323257","funder_display_name":"Universidad de Buenos Aires"}],"funders":[{"id":"https://openalex.org/F4320323257","display_name":"Universidad de Buenos Aires","ror":"https://ror.org/0081fs513"},{"id":"https://openalex.org/F4320334832","display_name":"Agencia Nacional de Promoci\u00f3n Cient\u00edfica y Tecnol\u00f3gica","ror":"https://ror.org/03stxzb56"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1814931954","https://openalex.org/W1915635625","https://openalex.org/W1981509058","https://openalex.org/W1990421901","https://openalex.org/W1990698063","https://openalex.org/W2012932442","https://openalex.org/W2013340095","https://openalex.org/W2020449594","https://openalex.org/W2033295584","https://openalex.org/W2046233258","https://openalex.org/W2047452386","https://openalex.org/W2053057991","https://openalex.org/W2060842569","https://openalex.org/W2063530272","https://openalex.org/W2066231767","https://openalex.org/W2100305481","https://openalex.org/W2109322710","https://openalex.org/W2114104545","https://openalex.org/W2118189700","https://openalex.org/W2119204091","https://openalex.org/W2130116522","https://openalex.org/W2137526110","https://openalex.org/W2159730169","https://openalex.org/W2173168040","https://openalex.org/W2174355534","https://openalex.org/W2174845172","https://openalex.org/W2255131131","https://openalex.org/W2267092331","https://openalex.org/W2323326409","https://openalex.org/W2516001222","https://openalex.org/W2592811885","https://openalex.org/W2606548143","https://openalex.org/W2740839656","https://openalex.org/W2743624002","https://openalex.org/W2743757702","https://openalex.org/W2774883395","https://openalex.org/W2900116500","https://openalex.org/W2953863996","https://openalex.org/W2994165170","https://openalex.org/W3016824603","https://openalex.org/W6685310792","https://openalex.org/W6756812761"],"related_works":["https://openalex.org/W3090446747","https://openalex.org/W2083872838","https://openalex.org/W2056412942","https://openalex.org/W2087463521","https://openalex.org/W2045666137","https://openalex.org/W2093797995","https://openalex.org/W4211196276","https://openalex.org/W2171581216","https://openalex.org/W4240704896","https://openalex.org/W2162713462"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":20},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":19},{"year":2022,"cited_by_count":18},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-14T08:43:22.919905","created_date":"2025-10-10T00:00:00"}
