{"id":"https://openalex.org/W3126437165","doi":"https://doi.org/10.1093/bioinformatics/btab079","title":"Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations","display_name":"Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations","publication_year":2021,"publication_date":"2021-01-29","ids":{"openalex":"https://openalex.org/W3126437165","doi":"https://doi.org/10.1093/bioinformatics/btab079","mag":"3126437165","pmid":"https://pubmed.ncbi.nlm.nih.gov/33532816"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab079","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab079","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hal.science/hal-03131704v1/document","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011784783","display_name":"Sandra D\u00e9rozier","orcid":"https://orcid.org/0000-0003-4082-3813"},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"funder","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Sandra D\u00e9rozier","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, INRAE, BioinfOmics, MIGALE Bioinformatics Facility , Jouy-en-Josas 78350, France","Universit\u00e9 Paris-Saclay, INRAE, MaIAGE , Jouy-en-Josas 78350, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, INRAE, BioinfOmics, MIGALE Bioinformatics Facility , Jouy-en-Josas 78350, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210088668"]},{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, INRAE, MaIAGE , Jouy-en-Josas 78350, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086683190","display_name":"Pierre Nicolas","orcid":"https://orcid.org/0000-0002-1133-0609"},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"funder","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Nicolas","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, INRAE, MaIAGE , Jouy-en-Josas 78350, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, INRAE, MaIAGE , Jouy-en-Josas 78350, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210088668"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049855503","display_name":"Ulrike M\u00e4der","orcid":"https://orcid.org/0000-0003-2873-0999"},"institutions":[{"id":"https://openalex.org/I2799318839","display_name":"Universit\u00e4tsmedizin Greifswald","ror":"https://ror.org/025vngs54","country_code":"DE","type":"education","lineage":["https://openalex.org/I2799318839"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ulrike M\u00e4der","raw_affiliation_strings":["Interfaculty Institute for Genetics and Functional Genomics, University Medicine Greifswald , Greifswald, Germany"],"affiliations":[{"raw_affiliation_string":"Interfaculty Institute for Genetics and Functional Genomics, University Medicine Greifswald , Greifswald, Germany","institution_ids":["https://openalex.org/I2799318839"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041918119","display_name":"Cyprien Gu\u00e9rin","orcid":"https://orcid.org/0000-0001-6102-7002"},"institutions":[{"id":"https://openalex.org/I4210088668","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96","country_code":"FR","type":"funder","lineage":["https://openalex.org/I4210088668"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Cyprien Gu\u00e9rin","raw_affiliation_strings":["Universit\u00e9 Paris-Saclay, INRAE, MaIAGE , Jouy-en-Josas 78350, France"],"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Paris-Saclay, INRAE, MaIAGE , Jouy-en-Josas 78350, France","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210088668"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5011784783","https://openalex.org/A5041918119"],"corresponding_institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210088668"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.5694,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.63492437,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"37","issue":"17","first_page":"2747","last_page":"2749"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9746999740600586,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7701714038848877},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7125735282897949},{"id":"https://openalex.org/keywords/software-deployment","display_name":"Software deployment","score":0.5698977708816528},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.565211296081543},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.5337949991226196},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.48898231983184814},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.48726263642311096},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.42020317912101746},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.36141932010650635},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3340839147567749},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3275929093360901},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16401609778404236},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12557309865951538},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.10089126229286194},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07155841588973999}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7701714038848877},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7125735282897949},{"id":"https://openalex.org/C105339364","wikidata":"https://www.wikidata.org/wiki/Q2297740","display_name":"Software deployment","level":2,"score":0.5698977708816528},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.565211296081543},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.5337949991226196},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.48898231983184814},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.48726263642311096},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.42020317912101746},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.36141932010650635},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3340839147567749},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3275929093360901},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16401609778404236},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12557309865951538},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.10089126229286194},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07155841588973999},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btab079","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab079","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33532816","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33532816","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-03131704v1","is_oa":true,"landing_page_url":"https://hal.science/hal-03131704","pdf_url":"https://hal.science/hal-03131704v1/document","source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2021, &#x27E8;10.1093/bioinformatics/btab079&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:HAL:hal-04454325v1","is_oa":true,"landing_page_url":"https://hal.inrae.fr/hal-04454325","pdf_url":"https://hal.inrae.fr/hal-04454325/document","source":{"id":"https://openalex.org/S4406922461","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://jobim2021.sciencesconf.org/","raw_type":"Conference papers"}],"best_oa_location":{"id":"pmh:oai:HAL:hal-03131704v1","is_oa":true,"landing_page_url":"https://hal.science/hal-03131704","pdf_url":"https://hal.science/hal-03131704v1/document","source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2021, &#x27E8;10.1093/bioinformatics/btab079&#x27E9;","raw_type":"Journal articles"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2025690006","display_name":null,"funder_award_id":"ANR-18-CE12-0025","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G2659166393","display_name":null,"funder_award_id":"ANR-18-CE12-00","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6876561401","display_name":null,"funder_award_id":"ANR-18","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320331560","display_name":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement","ror":"https://ror.org/003vg9w96"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3126437165.pdf","grobid_xml":"https://content.openalex.org/works/W3126437165.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W2021341670","https://openalex.org/W2077460182","https://openalex.org/W2103910129","https://openalex.org/W2147902743","https://openalex.org/W2322749552","https://openalex.org/W2336957559","https://openalex.org/W2632619973","https://openalex.org/W2738840941","https://openalex.org/W2762699776","https://openalex.org/W2770806876","https://openalex.org/W2783517692"],"related_works":["https://openalex.org/W2770234245","https://openalex.org/W96612179","https://openalex.org/W4229499248","https://openalex.org/W2566006169","https://openalex.org/W1567818861","https://openalex.org/W2987774938","https://openalex.org/W4256492088","https://openalex.org/W632915154","https://openalex.org/W2055733372","https://openalex.org/W2624709009"],"abstract_inverted_index":{"Websites":[0],"and":[1],"source":[2],"code":[3],"freely":[4],"accessible":[5],"at":[6],"https://genoscapist.migale.inrae.fr.":[7]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
