{"id":"https://openalex.org/W3124747858","doi":"https://doi.org/10.1093/bioinformatics/btab005","title":"Genome-scale <i>de novo</i> assembly using ALGA","display_name":"Genome-scale <i>de novo</i> assembly using ALGA","publication_year":2021,"publication_date":"2021-01-06","ids":{"openalex":"https://openalex.org/W3124747858","doi":"https://doi.org/10.1093/bioinformatics/btab005","mag":"3124747858","pmid":"https://pubmed.ncbi.nlm.nih.gov/33471088"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btab005","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab005","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/12/1644/39119213/btab005.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/37/12/1644/39119213/btab005.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052109290","display_name":"Sylwester Swat","orcid":"https://orcid.org/0000-0001-8763-0045"},"institutions":[{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Sylwester Swat","raw_affiliation_strings":["Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062328374","display_name":"Artur Laskowski","orcid":null},"institutions":[{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Artur Laskowski","raw_affiliation_strings":["Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076619623","display_name":"Jan Badura","orcid":"https://orcid.org/0000-0002-3222-9542"},"institutions":[{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Jan Badura","raw_affiliation_strings":["Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058606256","display_name":"Wojciech Frohmberg","orcid":"https://orcid.org/0000-0003-0064-1775"},"institutions":[{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Wojciech Frohmberg","raw_affiliation_strings":["Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009629429","display_name":"Pawe\u0142 Wojciechowski","orcid":"https://orcid.org/0000-0001-8020-9493"},"institutions":[{"id":"https://openalex.org/I4210152414","display_name":"Institute of Bioorganic Chemistry, Polish Academy of Sciences","ror":"https://ror.org/04ejdtr48","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210152414","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Pawel Wojciechowski","raw_affiliation_strings":["Institute of Bioorganic Chemistry, Polish Academy of Sciences , 61-704 Poznan, Poland","Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioorganic Chemistry, Polish Academy of Sciences , 61-704 Poznan, Poland","institution_ids":["https://openalex.org/I4210152414"]},{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035699932","display_name":"Aleksandra \u015awiercz","orcid":"https://orcid.org/0000-0002-5574-8222"},"institutions":[{"id":"https://openalex.org/I4210152414","display_name":"Institute of Bioorganic Chemistry, Polish Academy of Sciences","ror":"https://ror.org/04ejdtr48","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210152414","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Aleksandra Swiercz","raw_affiliation_strings":["Institute of Bioorganic Chemistry, Polish Academy of Sciences , 61-704 Poznan, Poland","Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioorganic Chemistry, Polish Academy of Sciences , 61-704 Poznan, Poland","institution_ids":["https://openalex.org/I4210152414"]},{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036768913","display_name":"Marta Kasprzak","orcid":"https://orcid.org/0000-0002-9863-5412"},"institutions":[{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Marta Kasprzak","raw_affiliation_strings":["Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":"https://orcid.org/0000-0002-9863-5412","affiliations":[{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024504556","display_name":"Jacek B\u0142a\u017cewicz","orcid":"https://orcid.org/0000-0001-8326-1094"},"institutions":[{"id":"https://openalex.org/I4210152414","display_name":"Institute of Bioorganic Chemistry, Polish Academy of Sciences","ror":"https://ror.org/04ejdtr48","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210152414","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I46597724","display_name":"Pozna\u0144 University of Technology","ror":"https://ror.org/00p7p3302","country_code":"PL","type":"education","lineage":["https://openalex.org/I46597724"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Jacek Blazewicz","raw_affiliation_strings":["Institute of Bioorganic Chemistry, Polish Academy of Sciences , 61-704 Poznan, Poland","Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Bioorganic Chemistry, Polish Academy of Sciences , 61-704 Poznan, Poland","institution_ids":["https://openalex.org/I4210152414"]},{"raw_affiliation_string":"Poznan University of Technology, Institute of Computing Science , 60-965 Poznan, Poland","institution_ids":["https://openalex.org/I46597724"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5036768913"],"corresponding_institution_ids":["https://openalex.org/I46597724"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":1.4478,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.82515822,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"37","issue":"12","first_page":"1644","last_page":"1651"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.49630001187324524,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.49630001187324524,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.4880000054836273,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.002400000113993883,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5889937281608582},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.5769472718238831},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.5681287050247192},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5175963640213013},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4831914007663727},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3526619076728821},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.34892112016677856},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.18232852220535278},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11721068620681763},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.11003854870796204}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5889937281608582},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.5769472718238831},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.5681287050247192},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5175963640213013},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4831914007663727},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3526619076728821},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.34892112016677856},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.18232852220535278},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11721068620681763},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.11003854870796204},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btab005","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab005","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/12/1644/39119213/btab005.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33471088","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33471088","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8289375","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8289375","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btab005","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btab005","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/37/12/1644/39119213/btab005.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5400000214576721,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G2294096858","display_name":null,"funder_award_id":"POIR.04.02.00-30-A004/16","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"}],"funders":[{"id":"https://openalex.org/F4320326815","display_name":"Infrastruktura PL-Grid","ror":null},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3124747858.pdf","grobid_xml":"https://content.openalex.org/works/W3124747858.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1493192698","https://openalex.org/W1635391495","https://openalex.org/W1984236772","https://openalex.org/W2014099509","https://openalex.org/W2022910024","https://openalex.org/W2034031757","https://openalex.org/W2074332603","https://openalex.org/W2102532874","https://openalex.org/W2105191441","https://openalex.org/W2107772251","https://openalex.org/W2113679889","https://openalex.org/W2115501618","https://openalex.org/W2120902911","https://openalex.org/W2127151197","https://openalex.org/W2129933858","https://openalex.org/W2136651963","https://openalex.org/W2146858470","https://openalex.org/W2158521043","https://openalex.org/W2160969485","https://openalex.org/W2410251856","https://openalex.org/W2419574648","https://openalex.org/W2462490406","https://openalex.org/W2469251889","https://openalex.org/W2763456665","https://openalex.org/W2885406561","https://openalex.org/W2887480761","https://openalex.org/W2895918907","https://openalex.org/W2941072767","https://openalex.org/W2949098970"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2086525401","https://openalex.org/W2006735166","https://openalex.org/W2794386548","https://openalex.org/W4381279187","https://openalex.org/W1992950355","https://openalex.org/W2013063066","https://openalex.org/W1841715584","https://openalex.org/W2766401759","https://openalex.org/W3134563641"],"abstract_inverted_index":{"MOTIVATION:":[0],"There":[1],"are":[2,55,320],"very":[3],"few":[4],"methods":[5,49,92],"for":[6,75,95,117,147],"de":[7,28,81,137],"novo":[8,138],"genome":[9,215,273,281],"assembly":[10,48,83],"based":[11,140],"on":[12,141,242,250],"the":[13,26,51,73,90,123,142,182,189,217,267],"overlap":[14,52,124,143],"graph":[15,30,53,125,144,183,200],"approach.":[16],"It":[17,43],"is":[18,44,127,212,219,291,312],"considered":[19],"as":[20,101,276],"giving":[21],"more":[22,98,160],"exact":[23,161],"results":[24,265],"than":[25],"so-called":[27],"Bruijn":[29],"approach":[31],"but":[32,176],"in":[33,77,159,164,214,240,254,266,296,299],"much":[34,39],"greater":[35,61],"time":[36],"and":[37,86,108,121,199,259,284],"of":[38,68,112,173,181,191,195,206,269,272,286,293,306],"higher":[40],"memory":[41,66],"usage.":[42],"not":[45,56],"uncommon":[46],"that":[47],"involving":[50],"model":[54,126],"able":[57],"to":[58,65,105,188,227],"successfully":[59],"compute":[60],"datasets,":[62],"mainly":[63,80],"due":[64],"limitation":[67],"a":[69,110,134,174,185,196,231,277],"computer.":[70],"This":[71],"was":[72,234],"reason":[74],"developing":[76],"last":[78],"decades":[79],"Bruijn-based":[82],"methods,":[84],"fast":[85],"fairly":[87],"accurate.":[88],"However,":[89],"latter":[91],"can":[93],"fail":[94],"longer":[96],"or":[97],"repetitive":[99],"genomes,":[100],"they":[102],"decompose":[103],"reads":[104],"shorter":[106],"fragments":[107],"lose":[109],"part":[111],"information.":[113],"An":[114],"efficient":[115],"assembler":[116,139],"processing":[118,297],"big":[119],"datasets":[120],"using":[122],"still":[128],"looked":[129],"out.":[130],"RESULTS:":[131],"We":[132],"propose":[133],"new":[135,156],"genome-scale":[136,243],"approach,":[145],"designed":[146],"short-read":[148],"sequencing":[149,244],"data.":[150],"The":[151,289],"method,":[152],"ALGA,":[153],"incorporates":[154],"several":[155],"ideas":[157],"resulting":[158,287],"contigs":[162,207],"produced":[163,263],"short":[165],"time.":[166],"Among":[167],"these":[168],"ideas,":[169],"we":[170],"have":[171],"creation":[172],"sparse":[175],"quite":[177],"informative":[178],"graph,":[179],"reduction":[180],"including":[184],"procedure":[186],"referring":[187],"problem":[190],"minimum":[192],"spanning":[193],"tree":[194],"local":[197],"subgraph,":[198],"traversal":[201],"connected":[202],"with":[203,222,236],"simultaneous":[204],"analysis":[205],"stored":[208],"so":[209],"far.":[210],"What":[211],"rare":[213],"assembly,":[216],"algorithm":[218,290],"almost":[220],"parameter-free,":[221],"only":[223],"one":[224,292],"optional":[225],"parameter":[226],"be":[228],"set":[229],"by":[230],"user.":[232],"ALGA":[233,262,311],"compared":[235],"nine":[237],"state-of-the-art":[238],"assemblers":[239],"tests":[241],"data":[245,298,319],"obtained":[246],"from":[247],"real":[248],"experiments":[249],"six":[251],"organisms,":[252],"differing":[253],"size,":[255],"coverage,":[256,282],"GC":[257],"content":[258],"repetition":[260],"rate.":[261],"best":[264],"sense":[268],"overall":[270],"quality":[271],"reconstruction,":[274],"understood":[275],"good":[278],"balance":[279],"between":[280],"accuracy":[283],"length":[285],"sequences.":[288],"tools":[294],"involved":[295],"currently":[300],"realized":[301],"national":[302],"project":[303],"Genomic":[304],"Map":[305],"Poland.":[307],"AVAILABILITY":[308],"AND":[309],"IMPLEMENTATION:":[310],"available":[313,321],"at":[314,322],"http://alga.put.poznan.pl.":[315],"SUPPLEMENTARY":[316],"INFORMATION:":[317],"Supplementary":[318],"Bioinformatics":[323],"online.":[324]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2021-02-01T00:00:00"}
