{"id":"https://openalex.org/W3091252886","doi":"https://doi.org/10.1093/bioinformatics/btaa846","title":"Fijiyama: a registration tool for 3D multimodal time-lapse imaging","display_name":"Fijiyama: a registration tool for 3D multimodal time-lapse imaging","publication_year":2020,"publication_date":"2020-09-17","ids":{"openalex":"https://openalex.org/W3091252886","doi":"https://doi.org/10.1093/bioinformatics/btaa846","mag":"3091252886","pmid":"https://pubmed.ncbi.nlm.nih.gov/32997734"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa846","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa846","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089694769","display_name":"Romain Fernandez","orcid":"https://orcid.org/0000-0003-3670-044X"},"institutions":[{"id":"https://openalex.org/I4210138622","display_name":"Institut Fran\u00e7ais de la Vigne et du Vin","ror":"https://ror.org/03synvw58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210138622"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Romain Fernandez","raw_affiliation_strings":["Institut Fran\u00e7ais de la Vigne et du vin, P\u00f4le National Mat\u00e9riel V\u00e9g\u00e9tal, UMT G\u00e9no-Vigne\u00ae , 34060 Montpellier Cedex 1, France"],"affiliations":[{"raw_affiliation_string":"Institut Fran\u00e7ais de la Vigne et du vin, P\u00f4le National Mat\u00e9riel V\u00e9g\u00e9tal, UMT G\u00e9no-Vigne\u00ae , 34060 Montpellier Cedex 1, France","institution_ids":["https://openalex.org/I4210138622"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084307064","display_name":"C\u00e9dric Moisy","orcid":"https://orcid.org/0000-0003-4637-4713"},"institutions":[{"id":"https://openalex.org/I4210138622","display_name":"Institut Fran\u00e7ais de la Vigne et du Vin","ror":"https://ror.org/03synvw58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210138622"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"C\u00e9dric Moisy","raw_affiliation_strings":["Institut Fran\u00e7ais de la Vigne et du vin, P\u00f4le National Mat\u00e9riel V\u00e9g\u00e9tal, UMT G\u00e9no-Vigne\u00ae , 34060 Montpellier Cedex 1, France"],"affiliations":[{"raw_affiliation_string":"Institut Fran\u00e7ais de la Vigne et du vin, P\u00f4le National Mat\u00e9riel V\u00e9g\u00e9tal, UMT G\u00e9no-Vigne\u00ae , 34060 Montpellier Cedex 1, France","institution_ids":["https://openalex.org/I4210138622"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5089694769"],"corresponding_institution_ids":["https://openalex.org/I4210138622"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":53.7897,"has_fulltext":false,"cited_by_count":62,"citation_normalized_percentile":{"value":0.99693923,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"37","issue":"10","first_page":"1482","last_page":"1484"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10191","display_name":"Robotics and Sensor-Based Localization","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/2202","display_name":"Aerospace Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10191","display_name":"Robotics and Sensor-Based Localization","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/2202","display_name":"Aerospace Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10627","display_name":"Advanced Image and Video Retrieval Techniques","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6063461899757385},{"id":"https://openalex.org/keywords/image-registration","display_name":"Image registration","score":0.5242143869400024},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5226102471351624},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.504402756690979},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.1768285632133484}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6063461899757385},{"id":"https://openalex.org/C166704113","wikidata":"https://www.wikidata.org/wiki/Q861092","display_name":"Image registration","level":3,"score":0.5242143869400024},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5226102471351624},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.504402756690979},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.1768285632133484}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btaa846","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa846","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32997734","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32997734","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:HAL:hal-05177439v1","is_oa":false,"landing_page_url":"https://hal.science/hal-05177439","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics, 2021, 37 (10), pp.1482-1484. &#x27E8;10.1093/bioinformatics/btaa846&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:agritrop.cirad.fr:599031","is_oa":false,"landing_page_url":"http://agritrop.cirad.fr/599031/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402311","display_name":"Agritrop (Cirad)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I131077856","host_organization_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","host_organization_lineage":["https://openalex.org/I131077856"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321783","display_name":"France AgriMer","ror":"https://ror.org/048nn3q69"},{"id":"https://openalex.org/F4320325914","display_name":"Comit\u00e9 National des Interprofessions des Vins \u00e0 Appellation d'Origine","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W78661028","https://openalex.org/W631225344","https://openalex.org/W1558633536","https://openalex.org/W1871230255","https://openalex.org/W2016029650","https://openalex.org/W2103857226","https://openalex.org/W2130623599","https://openalex.org/W2133287637","https://openalex.org/W2167279371","https://openalex.org/W2170167891","https://openalex.org/W2171911690","https://openalex.org/W2318640122","https://openalex.org/W2478727422","https://openalex.org/W2501809210","https://openalex.org/W2592817322","https://openalex.org/W2966422204","https://openalex.org/W3023576901","https://openalex.org/W4299551558","https://openalex.org/W6633458381","https://openalex.org/W6694752510"],"related_works":["https://openalex.org/W2772917594","https://openalex.org/W2036807459","https://openalex.org/W2058170566","https://openalex.org/W2755342338","https://openalex.org/W2166024367","https://openalex.org/W3116076068","https://openalex.org/W2229312674","https://openalex.org/W2951359407","https://openalex.org/W2079911747","https://openalex.org/W1969923398"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":19},{"year":2023,"cited_by_count":13},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-04T08:04:53.788161","created_date":"2025-10-10T00:00:00"}
