{"id":"https://openalex.org/W3117713187","doi":"https://doi.org/10.1093/bioinformatics/btaa821","title":"The effect of kinship in re-identification attacks against genomic data sharing beacons","display_name":"The effect of kinship in re-identification attacks against genomic data sharing beacons","publication_year":2020,"publication_date":"2020-09-08","ids":{"openalex":"https://openalex.org/W3117713187","doi":"https://doi.org/10.1093/bioinformatics/btaa821","mag":"3117713187","pmid":"https://pubmed.ncbi.nlm.nih.gov/33381836"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa821","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa821","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i903/35337124/btaa821.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i903/35337124/btaa821.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076400344","display_name":"Kerem Ay\u00f6z","orcid":null},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Kerem Ayoz","raw_affiliation_strings":["Bilkent University Computer Engineering Department, , Ankara 06800, Turkey"],"affiliations":[{"raw_affiliation_string":"Bilkent University Computer Engineering Department, , Ankara 06800, Turkey","institution_ids":["https://openalex.org/I168864056"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061995903","display_name":"Miray Ay\u015fen","orcid":null},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Miray Aysen","raw_affiliation_strings":["Bilkent University Computer Engineering Department, , Ankara 06800, Turkey"],"affiliations":[{"raw_affiliation_string":"Bilkent University Computer Engineering Department, , Ankara 06800, Turkey","institution_ids":["https://openalex.org/I168864056"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028326739","display_name":"Erman Ayday","orcid":"https://orcid.org/0000-0003-3383-1081"},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]},{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["TR","US"],"is_corresponding":true,"raw_author_name":"Erman Ayday","raw_affiliation_strings":["Bilkent University Computer Engineering Department, , Ankara 06800, Turkey","Case Western Reserve University Computer and Data Sciences Department, , Cleveland, OH 44106, USA"],"affiliations":[{"raw_affiliation_string":"Bilkent University Computer Engineering Department, , Ankara 06800, Turkey","institution_ids":["https://openalex.org/I168864056"]},{"raw_affiliation_string":"Case Western Reserve University Computer and Data Sciences Department, , Cleveland, OH 44106, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090836372","display_name":"A. Erc\u00fcment \u00c7i\u00e7ek","orcid":"https://orcid.org/0000-0001-8613-6619"},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]},{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["TR","US"],"is_corresponding":true,"raw_author_name":"A Ercument Cicek","raw_affiliation_strings":["Bilkent University Computer Engineering Department, , Ankara 06800, Turkey","Carnegie Mellon University Computational Biology Department, , Pittsburgh, PA 15213, USA"],"affiliations":[{"raw_affiliation_string":"Bilkent University Computer Engineering Department, , Ankara 06800, Turkey","institution_ids":["https://openalex.org/I168864056"]},{"raw_affiliation_string":"Carnegie Mellon University Computational Biology Department, , Pittsburgh, PA 15213, USA","institution_ids":["https://openalex.org/I74973139"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5028326739","https://openalex.org/A5090836372"],"corresponding_institution_ids":["https://openalex.org/I168864056","https://openalex.org/I58956616","https://openalex.org/I74973139"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.7206,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.75740565,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"36","issue":"Supplement_2","first_page":"i903","last_page":"i910"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6935248374938965},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6355922818183899},{"id":"https://openalex.org/keywords/beacon","display_name":"Beacon","score":0.633931577205658},{"id":"https://openalex.org/keywords/kinship","display_name":"Kinship","score":0.5294028520584106},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.5004913806915283},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.36876994371414185},{"id":"https://openalex.org/keywords/internet-privacy","display_name":"Internet privacy","score":0.3316706418991089},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2155253291130066},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17465978860855103},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.16178864240646362}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6935248374938965},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6355922818183899},{"id":"https://openalex.org/C102168758","wikidata":"https://www.wikidata.org/wiki/Q7321258","display_name":"Beacon","level":2,"score":0.633931577205658},{"id":"https://openalex.org/C144348335","wikidata":"https://www.wikidata.org/wiki/Q171318","display_name":"Kinship","level":2,"score":0.5294028520584106},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.5004913806915283},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.36876994371414185},{"id":"https://openalex.org/C108827166","wikidata":"https://www.wikidata.org/wiki/Q175975","display_name":"Internet privacy","level":1,"score":0.3316706418991089},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2155253291130066},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17465978860855103},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.16178864240646362},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D005190","descriptor_name":"Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005190","descriptor_name":"Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005190","descriptor_name":"Family","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033181","descriptor_name":"Information Dissemination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bioinformatics/btaa821","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa821","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i903/35337124/btaa821.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33381836","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33381836","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7773481","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7773481","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:repository.bilkent.edu.tr:11693/75588","is_oa":false,"landing_page_url":"http://hdl.handle.net/11693/75588","pdf_url":null,"source":{"id":"https://openalex.org/S4306400079","display_name":"Bilkent University Institutional Repository (Bilkent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I168864056","host_organization_name":"Bilkent University","host_organization_lineage":["https://openalex.org/I168864056"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa821","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa821","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i903/35337124/btaa821.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","score":0.7699999809265137,"id":"https://metadata.un.org/sdg/16"}],"awards":[{"id":"https://openalex.org/G1179340234","display_name":null,"funder_award_id":"BAGEP","funder_id":"https://openalex.org/F4320325520","funder_display_name":"Bilim Akademisi"},{"id":"https://openalex.org/G3261415133","display_name":null,"funder_award_id":"R01LM013429","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320325520","display_name":"Bilim Akademisi","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3117713187.pdf","grobid_xml":"https://content.openalex.org/works/W3117713187.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W131250914","https://openalex.org/W1838635991","https://openalex.org/W2038416582","https://openalex.org/W2058401000","https://openalex.org/W2142220330","https://openalex.org/W2217809488","https://openalex.org/W2573423285","https://openalex.org/W2609272369","https://openalex.org/W2618028147","https://openalex.org/W2739248717","https://openalex.org/W2766802942","https://openalex.org/W2888657901","https://openalex.org/W2919288702","https://openalex.org/W2975029703","https://openalex.org/W3123563534","https://openalex.org/W3159312600","https://openalex.org/W6605426282","https://openalex.org/W6681058540","https://openalex.org/W6768179924","https://openalex.org/W6773296133"],"related_works":["https://openalex.org/W2790129070","https://openalex.org/W2106845956","https://openalex.org/W3158435160","https://openalex.org/W1643556013","https://openalex.org/W1579373186","https://openalex.org/W2277502495","https://openalex.org/W4312685612","https://openalex.org/W2130422012","https://openalex.org/W3188540151","https://openalex.org/W2112938119"],"abstract_inverted_index":{"In":[0],"this":[1],"study,":[2],"for":[3,36],"the":[4,9,13,34,64,70,77,86,101,115,120],"first":[5],"time,":[6],"we":[7,58,118],"analyze":[8],"mitigation":[10],"effect":[11,103],"of":[12,42,63,66,79,88],"kinship":[14],"relationships":[15],"among":[16,46],"beacon":[17,31,71,95],"participants":[18],"against":[19],"re-identification":[20],"attacks.":[21],"We":[22,97],"argue":[23],"that":[24,60,128],"having":[25,61],"multiple":[26],"family":[27,50],"members":[28],"in":[29,69,76,85],"a":[30,39,67],"can":[32],"garble":[33],"information":[35],"attacks":[37,80],"since":[38],"substantial":[40,83],"number":[41,87],"variants":[43],"are":[44,112],"shared":[45],"kin-related":[47],"people.":[48],"Using":[49],"genomes":[51],"from":[52],"HapMap":[53],"and":[54,81,126],"synthetically":[55],"generated":[56],"datasets,":[57],"show":[59,99,127],"one":[62],"parents":[65],"victim":[68],"causes":[72],"(i)":[73],"significant":[74],"decrease":[75],"power":[78],"(ii)":[82],"increase":[84],"queries":[89],"needed":[90],"to":[91],"confirm":[92],"an":[93],"individual's":[94],"membership.":[96],"also":[98],"how":[100],"protection":[102],"attenuates":[104],"when":[105],"more":[106],"distant":[107],"relatives,":[108],"such":[109],"as":[110],"grandparents":[111],"included":[113],"alongside":[114],"victim.":[116],"Furthermore,":[117],"quantify":[119],"utility":[121],"loss":[122],"due":[123],"adding":[124],"relatives":[125],"it":[129],"is":[130],"smaller":[131],"compared":[132],"with":[133],"flipping":[134],"based":[135],"techniques.":[136]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
