{"id":"https://openalex.org/W3116796646","doi":"https://doi.org/10.1093/bioinformatics/btaa806","title":"PROBselect: accurate prediction of protein-binding residues from proteins sequences via dynamic predictor\u00a0selection","display_name":"PROBselect: accurate prediction of protein-binding residues from proteins sequences via dynamic predictor\u00a0selection","publication_year":2020,"publication_date":"2020-09-07","ids":{"openalex":"https://openalex.org/W3116796646","doi":"https://doi.org/10.1093/bioinformatics/btaa806","mag":"3116796646","pmid":"https://pubmed.ncbi.nlm.nih.gov/33381815"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa806","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa806","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i735/35336861/btaa806.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i735/35336861/btaa806.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032947862","display_name":"Fuhao Zhang","orcid":"https://orcid.org/0000-0002-5339-0714"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fuhao Zhang","raw_affiliation_strings":["Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104037476","display_name":"Wenbo Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenbo Shi","raw_affiliation_strings":["Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057149168","display_name":"Jian Zhang","orcid":"https://orcid.org/0000-0001-7155-7760"},"institutions":[{"id":"https://openalex.org/I130750295","display_name":"Xinyang Normal University","ror":"https://ror.org/0190x2a66","country_code":"CN","type":"education","lineage":["https://openalex.org/I130750295"]},{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Jian Zhang","raw_affiliation_strings":["Department of Computer Science, Virginia Commonwealth University , Richmond, VA 23284, USA","School of Computer and Information Technology, Xinyang Normal University , Xinyang 464000, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Virginia Commonwealth University , Richmond, VA 23284, USA","institution_ids":["https://openalex.org/I184840846"]},{"raw_affiliation_string":"School of Computer and Information Technology, Xinyang Normal University , Xinyang 464000, China","institution_ids":["https://openalex.org/I130750295"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033885404","display_name":"Min Zeng","orcid":"https://orcid.org/0000-0002-1726-0955"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Zeng","raw_affiliation_strings":["Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100719013","display_name":"Min Li","orcid":"https://orcid.org/0000-0002-0188-1394"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Li","raw_affiliation_strings":["Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Laboratory on Bioinformatics, School of Computer Science and Engineering, Central South University , Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088423732","display_name":"Lukasz Kurgan","orcid":"https://orcid.org/0000-0002-7749-0314"},"institutions":[{"id":"https://openalex.org/I184840846","display_name":"Virginia Commonwealth University","ror":"https://ror.org/02nkdxk79","country_code":"US","type":"education","lineage":["https://openalex.org/I184840846"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Lukasz Kurgan","raw_affiliation_strings":["Department of Computer Science, Virginia Commonwealth University , Richmond, VA 23284, USA"],"raw_orcid":"https://orcid.org/0000-0002-7749-0314","affiliations":[{"raw_affiliation_string":"Department of Computer Science, Virginia Commonwealth University , Richmond, VA 23284, USA","institution_ids":["https://openalex.org/I184840846"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5088423732"],"corresponding_institution_ids":["https://openalex.org/I184840846"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.2674,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.79584588,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"36","issue":"Supplement_2","first_page":"i735","last_page":"i744"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.33169999718666077,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.33169999718666077,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.302700012922287,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.12540000677108765,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6296887993812561},{"id":"https://openalex.org/keywords/predictive-modelling","display_name":"Predictive modelling","score":0.5242931246757507},{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.4982941150665283},{"id":"https://openalex.org/keywords/complementarity","display_name":"Complementarity (molecular biology)","score":0.48566949367523193},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4765898883342743},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.465597003698349},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.4633283019065857},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34473079442977905},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3226681351661682},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.217215895652771},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.18484023213386536},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13256728649139404},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1284184455871582}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6296887993812561},{"id":"https://openalex.org/C45804977","wikidata":"https://www.wikidata.org/wiki/Q7239673","display_name":"Predictive modelling","level":2,"score":0.5242931246757507},{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.4982941150665283},{"id":"https://openalex.org/C202269582","wikidata":"https://www.wikidata.org/wiki/Q2644277","display_name":"Complementarity (molecular biology)","level":2,"score":0.48566949367523193},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4765898883342743},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.465597003698349},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.4633283019065857},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34473079442977905},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3226681351661682},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.217215895652771},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.18484023213386536},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13256728649139404},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1284184455871582},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa806","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa806","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i735/35336861/btaa806.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33381815","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33381815","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa806","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa806","pdf_url":"https://academic.oup.com/bioinformatics/article-pdf/36/Supplement_2/i735/35336861/btaa806.pdf","source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1474490597","display_name":null,"funder_award_id":"111 Project","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4043378463","display_name":null,"funder_award_id":"61832019","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4066238608","display_name":null,"funder_award_id":"B18059","funder_id":"https://openalex.org/F4320327912","funder_display_name":"Higher Education Discipline Innovation Project"},{"id":"https://openalex.org/G7631435625","display_name":null,"funder_award_id":"B18059","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320327912","display_name":"Higher Education Discipline Innovation Project","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3116796646.pdf","grobid_xml":"https://content.openalex.org/works/W3116796646.grobid-xml"},"referenced_works_count":79,"referenced_works":["https://openalex.org/W1554017431","https://openalex.org/W1683278196","https://openalex.org/W1829437510","https://openalex.org/W1933350383","https://openalex.org/W1967668937","https://openalex.org/W1969156759","https://openalex.org/W1988844742","https://openalex.org/W1989949705","https://openalex.org/W1993856052","https://openalex.org/W2004377868","https://openalex.org/W2009672036","https://openalex.org/W2009768397","https://openalex.org/W2011044726","https://openalex.org/W2016375676","https://openalex.org/W2017230497","https://openalex.org/W2017337590","https://openalex.org/W2018661561","https://openalex.org/W2032929074","https://openalex.org/W2043338013","https://openalex.org/W2044955175","https://openalex.org/W2051210555","https://openalex.org/W2063782798","https://openalex.org/W2076052898","https://openalex.org/W2080167197","https://openalex.org/W2103485392","https://openalex.org/W2106060578","https://openalex.org/W2108134720","https://openalex.org/W2109300715","https://openalex.org/W2110705561","https://openalex.org/W2113985551","https://openalex.org/W2118737745","https://openalex.org/W2119983891","https://openalex.org/W2125987228","https://openalex.org/W2135046866","https://openalex.org/W2138865250","https://openalex.org/W2141627824","https://openalex.org/W2151412657","https://openalex.org/W2155194485","https://openalex.org/W2158714788","https://openalex.org/W2162259397","https://openalex.org/W2163326247","https://openalex.org/W2163879391","https://openalex.org/W2183771695","https://openalex.org/W2192578595","https://openalex.org/W2223549968","https://openalex.org/W2264362083","https://openalex.org/W2270702445","https://openalex.org/W2280888683","https://openalex.org/W2283929195","https://openalex.org/W2342374505","https://openalex.org/W2346045962","https://openalex.org/W2403509525","https://openalex.org/W2413107225","https://openalex.org/W2571643507","https://openalex.org/W2582176104","https://openalex.org/W2607138189","https://openalex.org/W2619445271","https://openalex.org/W2621897082","https://openalex.org/W2722005050","https://openalex.org/W2743276286","https://openalex.org/W2755371172","https://openalex.org/W2772417595","https://openalex.org/W2772865572","https://openalex.org/W2778113763","https://openalex.org/W2783632698","https://openalex.org/W2799775198","https://openalex.org/W2885244288","https://openalex.org/W2885520750","https://openalex.org/W2896074317","https://openalex.org/W2935275081","https://openalex.org/W2955690154","https://openalex.org/W2971405760","https://openalex.org/W2980746976","https://openalex.org/W2981353837","https://openalex.org/W4238372608","https://openalex.org/W6637328490","https://openalex.org/W6653343268","https://openalex.org/W6713290060","https://openalex.org/W6732748968"],"related_works":["https://openalex.org/W2521519254","https://openalex.org/W3139833644","https://openalex.org/W3123110765","https://openalex.org/W4383553409","https://openalex.org/W2104948296","https://openalex.org/W1735800226","https://openalex.org/W4285172739","https://openalex.org/W3123208392","https://openalex.org/W2212953222","https://openalex.org/W1995617853"],"abstract_inverted_index":{"MOTIVATION:":[0],"Knowledge":[1],"of":[2,9,16,28,36,41,76,80,83,135,143,157,184],"protein-binding":[3],"residues":[4,44],"(PBRs)":[5],"improves":[6],"our":[7],"understanding":[8],"protein-protein":[10,21],"interactions,":[11],"contributes":[12],"to":[13,53,59,97,111],"the":[14,55,104,123,136,144,164,169,173,189,209,222,225,230],"prediction":[15,231],"protein":[17,146,170],"functions":[18],"and":[19,39,113,130,212],"facilitates":[20],"docking":[22],"calculations.":[23],"While":[24],"many":[25],"sequence-based":[26],"predictors":[27,62,82,129,186,211],"PBRs":[29],"were":[30],"published,":[31],"they":[32],"offer":[33],"modest":[34],"levels":[35],"predictive":[37,56,74,90,133,182,204,227],"performance":[38,75,134,183],"most":[40],"them":[42],"cross-predict":[43],"that":[45,63,107,132,179,199,215],"interact":[46],"with":[47,103,208],"other":[48],"partners.":[49],"One":[50],"unexplored":[51],"option":[52],"improve":[54],"quality":[57,91,205,228],"is":[58,161,242],"design":[60,160],"consensus":[61,155],"combine":[64,216],"results":[65],"produced":[66],"by":[67],"multiple":[68],"methods.":[69,116],"RESULTS:":[70],"We":[71,85],"empirically":[72],"investigate":[73],"a":[77,194,234],"representative":[78],"set":[79],"nine":[81],"PBRs.":[84,158],"report":[86],"substantial":[87],"differences":[88],"in":[89],"when":[92,206],"these":[93,115,149],"methods":[94,138],"are":[95,108,250],"used":[96,110],"predict":[98],"individual":[99],"proteins,":[100],"which":[101],"contrast":[102],"dataset-level":[105],"benchmarks":[106],"currently":[109],"assess":[112],"compare":[114],"Our":[117,159],"analysis":[118],"provides":[119,201],"new":[120],"insights":[121],"for":[122,229],"cross-prediction":[124],"concern,":[125],"dissects":[126],"complementarity":[127],"between":[128],"demonstrates":[131],"top":[137],"depends":[139],"on":[140,163,176],"unique":[141],"characteristics":[142],"input":[145,236],"sequence.":[147,190],"Using":[148],"insights,":[150],"we":[151],"developed":[152],"PROBselect,":[153],"first-of-its-kind":[154],"predictor":[156,166],"based":[162],"dynamic":[165],"selection":[167,174],"at":[168,244,252],"level,":[171],"where":[172],"relies":[175],"regression-based":[177],"models":[178],"accurately":[180],"estimate":[181],"selected":[185],"directly":[187],"from":[188,233],"Empirical":[191],"assessment":[192],"using":[193],"low-similarity":[195],"test":[196],"dataset":[197],"shows":[198],"PROBselect":[200,220,241],"significantly":[202],"improved":[203],"compared":[207],"current":[210],"conventional":[213],"consensuses":[214],"residue-level":[217],"predictions.":[218],"Moreover,":[219],"informs":[221],"users":[223],"about":[224],"expected":[226],"generated":[232],"given":[235],"protein.":[237],"AVAILABILITY":[238],"AND":[239],"IMPLEMENTATION:":[240],"available":[243,251],"http://bioinformatics.csu.edu.cn/PROBselect/home/index.":[245],"SUPPLEMENTARY":[246],"INFORMATION:":[247],"Supplementary":[248],"data":[249],"Bioinformatics":[253],"online.":[254]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":4}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
