{"id":"https://openalex.org/W3114115943","doi":"https://doi.org/10.1093/bioinformatics/btaa791","title":"CLPred: a sequence-based protein crystallization predictor using BLSTM neural network","display_name":"CLPred: a sequence-based protein crystallization predictor using BLSTM neural network","publication_year":2020,"publication_date":"2020-09-07","ids":{"openalex":"https://openalex.org/W3114115943","doi":"https://doi.org/10.1093/bioinformatics/btaa791","mag":"3114115943","pmid":"https://pubmed.ncbi.nlm.nih.gov/33381840"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa791","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa791","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071990120","display_name":"Wenjing Xuan","orcid":"https://orcid.org/0000-0002-0535-2828"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wenjing Xuan","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University , Changsha 410083, China","School of Computer Science and Engineering","Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha 410083, China; School of Computer Science and Engineering"],"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University , Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering","institution_ids":[]},{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha 410083, China; School of Computer Science and Engineering","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100432426","display_name":"Ning Liu","orcid":"https://orcid.org/0000-0003-4943-6625"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ning Liu","raw_affiliation_strings":["School of Computer Science and Engineering"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054096088","display_name":"Neng Huang","orcid":"https://orcid.org/0000-0001-7187-0749"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Neng Huang","raw_affiliation_strings":["School of Computer Science and Engineering"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079316675","display_name":"Yaohang Li","orcid":"https://orcid.org/0000-0003-0178-1876"},"institutions":[{"id":"https://openalex.org/I81365321","display_name":"Old Dominion University","ror":"https://ror.org/04zjtrb98","country_code":"US","type":"education","lineage":["https://openalex.org/I81365321"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yaohang Li","raw_affiliation_strings":["Department of Computer Science, Old Dominion University , Norfolk, VA 23529, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Old Dominion University , Norfolk, VA 23529, USA","institution_ids":["https://openalex.org/I81365321"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100438360","display_name":"Jianxin Wang","orcid":"https://orcid.org/0000-0003-1516-0480"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianxin Wang","raw_affiliation_strings":["Hunan Provincial Key Lab on Bioinformatics, Central South University , Changsha 410083, China","School of Computer Science and Engineering","Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha 410083, China; School of Computer Science and Engineering"],"affiliations":[{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University , Changsha 410083, China","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"School of Computer Science and Engineering","institution_ids":[]},{"raw_affiliation_string":"Hunan Provincial Key Lab on Bioinformatics, Central South University, Changsha 410083, China; School of Computer Science and Engineering","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5071990120"],"corresponding_institution_ids":["https://openalex.org/I139660479"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.58,"has_fulltext":false,"cited_by_count":18,"citation_normalized_percentile":{"value":0.65821864,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":99},"biblio":{"volume":"36","issue":"Supplement_2","first_page":"i709","last_page":"i717"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.6558295488357544},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.626423716545105},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6232311129570007},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4380662441253662},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34251868724823},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32882213592529297},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.2758239209651947},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19120097160339355},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14387154579162598},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09281975030899048}],"concepts":[{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.6558295488357544},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.626423716545105},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6232311129570007},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4380662441253662},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34251868724823},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32882213592529297},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.2758239209651947},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19120097160339355},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14387154579162598},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09281975030899048}],"mesh":[{"descriptor_ui":"D000071243","descriptor_name":"Zika Virus Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071243","descriptor_name":"Zika Virus Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071243","descriptor_name":"Zika Virus Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071244","descriptor_name":"Zika Virus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071244","descriptor_name":"Zika Virus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071244","descriptor_name":"Zika Virus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003460","descriptor_name":"Crystallization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003460","descriptor_name":"Crystallization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003460","descriptor_name":"Crystallization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa791","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa791","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33381840","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33381840","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4043378463","display_name":null,"funder_award_id":"61832019","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7631435625","display_name":null,"funder_award_id":"B18059","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7923915280","display_name":null,"funder_award_id":"U1909208","funder_id":"https://openalex.org/F4320334064","funder_display_name":"National Natural Science Foundation of China-Zhejiang Joint Fund for the Integration of Industrialization and Informatization"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320334064","display_name":"National Natural Science Foundation of China-Zhejiang Joint Fund for the Integration of Industrialization and Informatization","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":52,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1869516088","https://openalex.org/W1903510838","https://openalex.org/W1904365287","https://openalex.org/W1930795817","https://openalex.org/W1963689377","https://openalex.org/W1975509419","https://openalex.org/W2006431107","https://openalex.org/W2009630602","https://openalex.org/W2014824341","https://openalex.org/W2030226083","https://openalex.org/W2059926522","https://openalex.org/W2062849515","https://openalex.org/W2064675550","https://openalex.org/W2073793320","https://openalex.org/W2082698293","https://openalex.org/W2098101628","https://openalex.org/W2109553965","https://openalex.org/W2112796928","https://openalex.org/W2144587714","https://openalex.org/W2147702777","https://openalex.org/W2166744107","https://openalex.org/W2168521460","https://openalex.org/W2169041564","https://openalex.org/W2170747616","https://openalex.org/W2187089797","https://openalex.org/W2271840356","https://openalex.org/W2321164824","https://openalex.org/W2324101609","https://openalex.org/W2338781003","https://openalex.org/W2416197838","https://openalex.org/W2440774392","https://openalex.org/W2474204065","https://openalex.org/W2497891252","https://openalex.org/W2534377269","https://openalex.org/W2549322646","https://openalex.org/W2560238333","https://openalex.org/W2649433081","https://openalex.org/W2776730476","https://openalex.org/W2786672974","https://openalex.org/W2900903885","https://openalex.org/W2912478095","https://openalex.org/W2919115771","https://openalex.org/W2963347351","https://openalex.org/W2964121744","https://openalex.org/W2980279728","https://openalex.org/W4256301573","https://openalex.org/W6631190155","https://openalex.org/W6640036494","https://openalex.org/W6685082496","https://openalex.org/W6694517276","https://openalex.org/W6748816842"],"related_works":["https://openalex.org/W2391251536","https://openalex.org/W2362198218","https://openalex.org/W1982750869","https://openalex.org/W2019521278","https://openalex.org/W1984922432","https://openalex.org/W2113077220","https://openalex.org/W2375008505","https://openalex.org/W2350679292","https://openalex.org/W2095784700","https://openalex.org/W2977939402"],"abstract_inverted_index":{"https://github.com/xuanwenjing/CLPred.":[0]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
