{"id":"https://openalex.org/W3084551437","doi":"https://doi.org/10.1093/bioinformatics/btaa776","title":"Incorporating prior knowledge into regularized regression","display_name":"Incorporating prior knowledge into regularized regression","publication_year":2020,"publication_date":"2020-09-01","ids":{"openalex":"https://openalex.org/W3084551437","doi":"https://doi.org/10.1093/bioinformatics/btaa776","mag":"3084551437","pmid":"https://pubmed.ncbi.nlm.nih.gov/32915960"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa776","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa776","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8599719","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043247572","display_name":"Chubing Zeng","orcid":"https://orcid.org/0000-0001-5746-7881"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chubing Zeng","raw_affiliation_strings":["Division of Biostatistics, Department of Preventive Medicine, Keck School of Medicine, University of Southern California , Los Angeles, CA 90033, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics, Department of Preventive Medicine, Keck School of Medicine, University of Southern California , Los Angeles, CA 90033, USA","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021077470","display_name":"Duncan C. Thomas","orcid":"https://orcid.org/0000-0002-6040-8804"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Duncan Campbell Thomas","raw_affiliation_strings":["Division of Biostatistics, Department of Preventive Medicine, Keck School of Medicine, University of Southern California , Los Angeles, CA 90033, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics, Department of Preventive Medicine, Keck School of Medicine, University of Southern California , Los Angeles, CA 90033, USA","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5047860888","display_name":"Juan Pablo Lewinger","orcid":"https://orcid.org/0000-0002-0692-2570"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Juan Pablo Lewinger","raw_affiliation_strings":["Division of Biostatistics, Department of Preventive Medicine, Keck School of Medicine, University of Southern California , Los Angeles, CA 90033, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics, Department of Preventive Medicine, Keck School of Medicine, University of Southern California , Los Angeles, CA 90033, USA","institution_ids":["https://openalex.org/I1174212"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5047860888"],"corresponding_institution_ids":["https://openalex.org/I1174212"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":3.5293,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.93813366,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"37","issue":"4","first_page":"514","last_page":"521"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11236","display_name":"Control Systems and Identification","score":0.9818000197410583,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12814","display_name":"Gaussian Processes and Bayesian Inference","score":0.9764000177383423,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/regression","display_name":"Regression","score":0.6051032543182373},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5509752035140991},{"id":"https://openalex.org/keywords/regression-analysis","display_name":"Regression analysis","score":0.46205654740333557},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40718328952789307},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35312509536743164},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.35024213790893555},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2700299918651581}],"concepts":[{"id":"https://openalex.org/C83546350","wikidata":"https://www.wikidata.org/wiki/Q1139051","display_name":"Regression","level":2,"score":0.6051032543182373},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5509752035140991},{"id":"https://openalex.org/C152877465","wikidata":"https://www.wikidata.org/wiki/Q208042","display_name":"Regression analysis","level":2,"score":0.46205654740333557},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40718328952789307},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35312509536743164},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.35024213790893555},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2700299918651581}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bioinformatics/btaa776","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa776","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32915960","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32915960","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8599719","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8599719","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:8599719","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8599719","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bioinformatics","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","score":0.47999998927116394,"id":"https://metadata.un.org/sdg/16"}],"awards":[{"id":"https://openalex.org/G2878536864","display_name":null,"funder_award_id":"R01 CA140561","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G5229491074","display_name":null,"funder_award_id":"P01 CA196569","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":48,"referenced_works":["https://openalex.org/W1578530776","https://openalex.org/W1881929920","https://openalex.org/W1976502930","https://openalex.org/W1976734415","https://openalex.org/W1982652137","https://openalex.org/W1982992776","https://openalex.org/W1989773675","https://openalex.org/W2005895632","https://openalex.org/W2010441486","https://openalex.org/W2011999110","https://openalex.org/W2020925091","https://openalex.org/W2053039860","https://openalex.org/W2085439484","https://openalex.org/W2097360283","https://openalex.org/W2099944170","https://openalex.org/W2103017472","https://openalex.org/W2116868464","https://openalex.org/W2129075946","https://openalex.org/W2134752341","https://openalex.org/W2135046866","https://openalex.org/W2138019504","https://openalex.org/W2143423446","https://openalex.org/W2150149003","https://openalex.org/W2161765392","https://openalex.org/W2171980229","https://openalex.org/W2230749025","https://openalex.org/W2258675270","https://openalex.org/W2296319761","https://openalex.org/W2319195321","https://openalex.org/W2462053388","https://openalex.org/W2511479883","https://openalex.org/W2580401855","https://openalex.org/W2749454676","https://openalex.org/W2784638391","https://openalex.org/W2897914417","https://openalex.org/W2911546748","https://openalex.org/W2953208043","https://openalex.org/W2963121741","https://openalex.org/W4243607236","https://openalex.org/W4250589301","https://openalex.org/W4285719527","https://openalex.org/W4294541781","https://openalex.org/W6663749548","https://openalex.org/W6677306910","https://openalex.org/W6679419796","https://openalex.org/W6684942582","https://openalex.org/W6700129589","https://openalex.org/W6743823378"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W4387369504","https://openalex.org/W3046775127","https://openalex.org/W4394896187","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3107602296","https://openalex.org/W4364306694","https://openalex.org/W4312192474"],"abstract_inverted_index":{"The":[0],"methods":[1],"have":[2],"been":[3],"implemented":[4],"in":[5],"the":[6],"R":[7],"package":[8],"xtune":[9],"freely":[10],"available":[11],"for":[12],"download":[13],"from":[14],"https://cran.r-project.org/web/packages/xtune/index.html.":[15]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":2}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
