{"id":"https://openalex.org/W4242305702","doi":"https://doi.org/10.1093/bioinformatics/btaa663","title":"UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase","display_name":"UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase","publication_year":2020,"publication_date":"2020-12-01","ids":{"openalex":"https://openalex.org/W4242305702","doi":"https://doi.org/10.1093/bioinformatics/btaa663"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa663","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa663","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"erratum","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1093/bioinformatics/btaa663","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084502030","display_name":"Alistair MacDougall","orcid":"https://orcid.org/0000-0003-2857-3460"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Alistair MacDougall","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030528188","display_name":"Vladimir Volynkin","orcid":"https://orcid.org/0000-0002-8799-1163"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vladimir Volynkin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031397536","display_name":"Rabie Saidi","orcid":"https://orcid.org/0000-0002-0449-5253"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rabie Saidi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085625320","display_name":"Diego Poggioli","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Diego Poggioli","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039390024","display_name":"Hermann Zellner","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hermann Zellner","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076857775","display_name":"Emma Hatton-Ellis","orcid":"https://orcid.org/0000-0002-7262-1928"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Emma Hatton-Ellis","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082961445","display_name":"Vishal Joshi","orcid":"https://orcid.org/0000-0002-2542-8885"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vishal Joshi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066278201","display_name":"Claire O\u2019Donovan","orcid":"https://orcid.org/0000-0001-8051-7429"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Claire O\u2019Donovan","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026050023","display_name":"Sandra Orchard","orcid":"https://orcid.org/0000-0002-8878-3972"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sandra Orchard","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039823870","display_name":"Andrea H Auchincloss","orcid":"https://orcid.org/0000-0002-5297-5390"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Andrea H Auchincloss","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012694144","display_name":"Delphine Baratin","orcid":"https://orcid.org/0000-0002-4873-3030"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Delphine Baratin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078283120","display_name":"Jerven Bolleman","orcid":"https://orcid.org/0000-0002-7449-1266"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jerven Bolleman","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089027967","display_name":"Elisabeth Coudert","orcid":"https://orcid.org/0000-0001-8314-404X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Elisabeth Coudert","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029434401","display_name":"Edouard de Castro","orcid":"https://orcid.org/0000-0001-5436-7383"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Edouard de Castro","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000732341","display_name":"Chantal Hulo","orcid":"https://orcid.org/0000-0001-8176-7999"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chantal Hulo","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072404288","display_name":"Patrick Masson","orcid":"https://orcid.org/0000-0001-7646-0052"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Patrick Masson","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030613382","display_name":"Ivo Pedruzzi","orcid":"https://orcid.org/0000-0001-8561-7170"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ivo Pedruzzi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044580086","display_name":"Catherine Rivoire","orcid":"https://orcid.org/0000-0002-5979-8382"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Catherine Rivoire","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001355963","display_name":"Cecilia N. Arighi","orcid":"https://orcid.org/0000-0002-0803-4817"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cecilia Arighi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100432295","display_name":"Qinghua Wang","orcid":"https://orcid.org/0000-0002-8032-6291"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Qinghua Wang","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004336328","display_name":"Chuming Chen","orcid":"https://orcid.org/0000-0002-7287-9013"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chuming Chen","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027838788","display_name":"Hongzhan Huang","orcid":"https://orcid.org/0000-0001-9594-9304"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hongzhan Huang","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051040145","display_name":"John S. Garavelli","orcid":"https://orcid.org/0000-0002-4131-735X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"John Garavelli","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111947243","display_name":"C R Vinayaka","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"C R Vinayaka","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103499788","display_name":"Lai-Su Yeh","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lai-Su Yeh","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005555412","display_name":"Darren A. Natale","orcid":"https://orcid.org/0000-0001-5809-9523"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Darren A Natale","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066512581","display_name":"Kati Laiho","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kati Laiho","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071535801","display_name":"Mar\u00eda Martin","orcid":"https://orcid.org/0000-0001-5454-2815"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Maria-Jesus Martin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081793262","display_name":"Alexandre Renaux","orcid":"https://orcid.org/0000-0002-4339-2791"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alexandre Renaux","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5083831949","display_name":"Klemens Pichler","orcid":"https://orcid.org/0000-0001-6099-8931"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Klemens Pichler","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":30,"corresponding_author_ids":["https://openalex.org/A5084502030"],"corresponding_institution_ids":[],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":{"value":3618,"currency":"USD","value_usd":3618},"fwci":0.9279,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.81304832,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"36","issue":"22-23","first_page":"5562","last_page":"5562"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9174000024795532,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9174000024795532,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9124000072479248,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.9230141639709473},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7742706537246704},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7345738410949707},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5399075150489807},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4505607485771179},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26019445061683655},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10325005650520325}],"concepts":[{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.9230141639709473},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7742706537246704},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7345738410949707},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5399075150489807},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4505607485771179},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26019445061683655},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10325005650520325},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1093/bioinformatics/btaa663","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa663","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1093/bioinformatics/btaa663","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa663","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","id":"https://metadata.un.org/sdg/2","score":0.5199999809265137}],"awards":[{"id":"https://openalex.org/G210958261","display_name":null,"funder_award_id":"BB/T010541/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W24553703","https://openalex.org/W4211000692","https://openalex.org/W2102027645","https://openalex.org/W2107785922","https://openalex.org/W2035528219","https://openalex.org/W2402478170","https://openalex.org/W2946410450","https://openalex.org/W2901823680"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":3}],"updated_date":"2026-02-25T08:12:03.925757","created_date":"2025-10-10T00:00:00"}