{"id":"https://openalex.org/W3043917474","doi":"https://doi.org/10.1093/bioinformatics/btaa642","title":"Numt identification and removal with RtN!","display_name":"Numt identification and removal with RtN!","publication_year":2020,"publication_date":"2020-07-18","ids":{"openalex":"https://openalex.org/W3043917474","doi":"https://doi.org/10.1093/bioinformatics/btaa642","mag":"3043917474","pmid":"https://pubmed.ncbi.nlm.nih.gov/32706871"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa642","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa642","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018204575","display_name":"August E. Woerner","orcid":"https://orcid.org/0000-0002-9372-1127"},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I165139151","display_name":"University of North Texas Health Science Center","ror":"https://ror.org/05msxaq47","country_code":"US","type":"education","lineage":["https://openalex.org/I165139151"]},{"id":"https://openalex.org/I4210147155","display_name":"Pediatrics and Genetics","ror":"https://ror.org/03t432d20","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210147155"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"August E Woerner","raw_affiliation_strings":["Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","Department of Microbiology, Immunology and Genetics"],"affiliations":[{"raw_affiliation_string":"Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I165139151"]},{"raw_affiliation_string":"Department of Microbiology, Immunology and Genetics","institution_ids":["https://openalex.org/I4210147155"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010686081","display_name":"Jennifer D. Churchill","orcid":"https://orcid.org/0000-0001-9796-193X"},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I165139151","display_name":"University of North Texas Health Science Center","ror":"https://ror.org/05msxaq47","country_code":"US","type":"education","lineage":["https://openalex.org/I165139151"]},{"id":"https://openalex.org/I4210147155","display_name":"Pediatrics and Genetics","ror":"https://ror.org/03t432d20","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210147155"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer Churchill Cihlar","raw_affiliation_strings":["Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","Department of Microbiology, Immunology and Genetics"],"affiliations":[{"raw_affiliation_string":"Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I165139151"]},{"raw_affiliation_string":"Department of Microbiology, Immunology and Genetics","institution_ids":["https://openalex.org/I4210147155"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035059970","display_name":"Utpal Smart","orcid":"https://orcid.org/0000-0002-1980-5357"},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I165139151","display_name":"University of North Texas Health Science Center","ror":"https://ror.org/05msxaq47","country_code":"US","type":"education","lineage":["https://openalex.org/I165139151"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Utpal Smart","raw_affiliation_strings":["Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA"],"affiliations":[{"raw_affiliation_string":"Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I165139151"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043851482","display_name":"Bruce Budowle","orcid":"https://orcid.org/0000-0003-4116-2930"},"institutions":[{"id":"https://openalex.org/I123534392","display_name":"University of North Texas","ror":"https://ror.org/00v97ad02","country_code":"US","type":"education","lineage":["https://openalex.org/I123534392"]},{"id":"https://openalex.org/I165139151","display_name":"University of North Texas Health Science Center","ror":"https://ror.org/05msxaq47","country_code":"US","type":"education","lineage":["https://openalex.org/I165139151"]},{"id":"https://openalex.org/I4210147155","display_name":"Pediatrics and Genetics","ror":"https://ror.org/03t432d20","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210147155"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bruce Budowle","raw_affiliation_strings":["Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","Department of Microbiology, Immunology and Genetics"],"affiliations":[{"raw_affiliation_string":"Center for Human Identification, University of North Texas Health Science Center (UNTHSC) , Fort Worth, TX 76107, USA","institution_ids":["https://openalex.org/I123534392","https://openalex.org/I165139151"]},{"raw_affiliation_string":"Department of Microbiology, Immunology and Genetics","institution_ids":["https://openalex.org/I4210147155"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5018204575"],"corresponding_institution_ids":["https://openalex.org/I123534392","https://openalex.org/I165139151","https://openalex.org/I4210147155"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.5884,"has_fulltext":false,"cited_by_count":27,"citation_normalized_percentile":{"value":0.83377898,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"36","issue":"20","first_page":"5115","last_page":"5116"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mitochondrial-dna","display_name":"Mitochondrial DNA","score":0.7066107392311096},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6485050320625305},{"id":"https://openalex.org/keywords/massive-parallel-sequencing","display_name":"Massive parallel sequencing","score":0.6229686141014099},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6223815679550171},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5799850225448608},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5663886070251465},{"id":"https://openalex.org/keywords/nuclear-gene","display_name":"Nuclear gene","score":0.496175616979599},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4886086583137512},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4571930468082428},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.42207491397857666},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.4211495518684387},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3667009174823761},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.27389347553253174}],"concepts":[{"id":"https://openalex.org/C24586158","wikidata":"https://www.wikidata.org/wiki/Q27075","display_name":"Mitochondrial DNA","level":3,"score":0.7066107392311096},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6485050320625305},{"id":"https://openalex.org/C192800701","wikidata":"https://www.wikidata.org/wiki/Q6784807","display_name":"Massive parallel sequencing","level":4,"score":0.6229686141014099},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6223815679550171},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5799850225448608},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5663886070251465},{"id":"https://openalex.org/C20750100","wikidata":"https://www.wikidata.org/wiki/Q7068120","display_name":"Nuclear gene","level":4,"score":0.496175616979599},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4886086583137512},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4571930468082428},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.42207491397857666},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4211495518684387},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3667009174823761},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.27389347553253174},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054629","descriptor_name":"Genome, Mitochondrial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa642","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa642","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32706871","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32706871","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7707065715","display_name":null,"funder_award_id":"2017-DN-BX-0134","funder_id":"https://openalex.org/F4320337430","funder_display_name":"National Institute of Justice"}],"funders":[{"id":"https://openalex.org/F4320337430","display_name":"National Institute of Justice","ror":"https://ror.org/00v8p7w89"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1786673882","https://openalex.org/W1974975570","https://openalex.org/W2052909120","https://openalex.org/W2103441770","https://openalex.org/W2108234281","https://openalex.org/W2109891003","https://openalex.org/W2112113834","https://openalex.org/W2558885334","https://openalex.org/W2564424316","https://openalex.org/W2768563572","https://openalex.org/W2888978447","https://openalex.org/W2926087143","https://openalex.org/W2962760346","https://openalex.org/W2967067827"],"related_works":["https://openalex.org/W2808490043","https://openalex.org/W3132248338","https://openalex.org/W4384929533","https://openalex.org/W119597399","https://openalex.org/W2414525447","https://openalex.org/W2062409806","https://openalex.org/W2005520835","https://openalex.org/W2887244195","https://openalex.org/W2796344075","https://openalex.org/W2527940258"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":2}],"updated_date":"2026-04-17T18:11:37.981687","created_date":"2025-10-10T00:00:00"}