{"id":"https://openalex.org/W3016434207","doi":"https://doi.org/10.1093/bioinformatics/btaa258","title":"HotSpot3D web server: an integrated resource for mutation analysis in protein 3D structures","display_name":"HotSpot3D web server: an integrated resource for mutation analysis in protein 3D structures","publication_year":2020,"publication_date":"2020-04-15","ids":{"openalex":"https://openalex.org/W3016434207","doi":"https://doi.org/10.1093/bioinformatics/btaa258","mag":"3016434207","pmid":"https://pubmed.ncbi.nlm.nih.gov/32315389"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa258","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa258","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017964476","display_name":"Shanyu Chen","orcid":"https://orcid.org/0000-0002-1163-7635"},"institutions":[{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]},{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanyu Chen","raw_affiliation_strings":["Computer Network Information Center , Chinese Academy of Sciences","University of Chinese Academy of Sciences , Beijing 100190, China"],"affiliations":[{"raw_affiliation_string":"Computer Network Information Center , Chinese Academy of Sciences","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences , Beijing 100190, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101913385","display_name":"Xiaoyu He","orcid":"https://orcid.org/0000-0002-5481-2763"},"institutions":[{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoyu He","raw_affiliation_strings":["Computer Network Information Center , Chinese Academy of Sciences","University of Chinese Academy of Sciences , Beijing 100190, China"],"affiliations":[{"raw_affiliation_string":"Computer Network Information Center , Chinese Academy of Sciences","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences , Beijing 100190, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046581897","display_name":"Ruilin Li","orcid":"https://orcid.org/0000-0001-9593-1235"},"institutions":[{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruilin Li","raw_affiliation_strings":["Computer Network Information Center , Chinese Academy of Sciences"],"affiliations":[{"raw_affiliation_string":"Computer Network Information Center , Chinese Academy of Sciences","institution_ids":["https://openalex.org/I4210108629"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086779859","display_name":"Xiaohong Duan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiaohong Duan","raw_affiliation_strings":["ChosenMed Technology (Beijing) Co. Ltd , Beijing 100176, China"],"affiliations":[{"raw_affiliation_string":"ChosenMed Technology (Beijing) Co. Ltd , Beijing 100176, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008702128","display_name":"Beifang Niu","orcid":"https://orcid.org/0000-0002-7448-7793"},"institutions":[{"id":"https://openalex.org/I4210108629","display_name":"Computer Network Information Center","ror":"https://ror.org/01s0wyf50","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210108629"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Beifang Niu","raw_affiliation_strings":["ChosenMed Technology (Beijing) Co. Ltd , Beijing 100176, China","Computer Network Information Center , Chinese Academy of Sciences","University of Chinese Academy of Sciences , Beijing 100190, China"],"affiliations":[{"raw_affiliation_string":"ChosenMed Technology (Beijing) Co. Ltd , Beijing 100176, China","institution_ids":[]},{"raw_affiliation_string":"Computer Network Information Center , Chinese Academy of Sciences","institution_ids":["https://openalex.org/I4210108629"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences , Beijing 100190, China","institution_ids":["https://openalex.org/I4210165038"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5008702128"],"corresponding_institution_ids":["https://openalex.org/I4210108629","https://openalex.org/I4210165038"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":1.1599,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.77181788,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"36","issue":"12","first_page":"3944","last_page":"3946"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9836000204086304,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9797000288963318,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6195148825645447},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.6059557199478149},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.5813478827476501},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5360949635505676},{"id":"https://openalex.org/keywords/mutation-testing","display_name":"Mutation testing","score":0.5259811282157898},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.37477394938468933},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3567444682121277},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.30052465200424194},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22759872674942017},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18419376015663147},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.08243316411972046}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6195148825645447},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.6059557199478149},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.5813478827476501},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5360949635505676},{"id":"https://openalex.org/C163565370","wikidata":"https://www.wikidata.org/wiki/Q4308623","display_name":"Mutation testing","level":4,"score":0.5259811282157898},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.37477394938468933},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3567444682121277},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.30052465200424194},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22759872674942017},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18419376015663147},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.08243316411972046},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa258","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa258","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32315389","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32315389","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1465109388","display_name":null,"funder_award_id":"31771466","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1956577542","https://openalex.org/W2031407623","https://openalex.org/W2140047797","https://openalex.org/W2167888624","https://openalex.org/W2284827612","https://openalex.org/W2344185956","https://openalex.org/W2439991713","https://openalex.org/W2582236637","https://openalex.org/W2810962524"],"related_works":["https://openalex.org/W2123958666","https://openalex.org/W2380988690","https://openalex.org/W2546792321","https://openalex.org/W2488011889","https://openalex.org/W2165310406","https://openalex.org/W2139763472","https://openalex.org/W2546441935","https://openalex.org/W2951506308","https://openalex.org/W2126723155","https://openalex.org/W2232482475"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
