{"id":"https://openalex.org/W3012566059","doi":"https://doi.org/10.1093/bioinformatics/btaa203","title":"Cancer subtype classification and modeling by pathway attention and propagation","display_name":"Cancer subtype classification and modeling by pathway attention and propagation","publication_year":2020,"publication_date":"2020-03-19","ids":{"openalex":"https://openalex.org/W3012566059","doi":"https://doi.org/10.1093/bioinformatics/btaa203","mag":"3012566059","pmid":"https://pubmed.ncbi.nlm.nih.gov/32207514"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa203","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa203","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085449381","display_name":"Sangseon Lee","orcid":"https://orcid.org/0000-0002-7398-9580"},"institutions":[{"id":"https://openalex.org/I4210129773","display_name":"Institute of Engineering","ror":"https://ror.org/03ny67e60","country_code":"NP","type":"education","lineage":["https://openalex.org/I155028946","https://openalex.org/I4210129773"]}],"countries":["NP"],"is_corresponding":false,"raw_author_name":"Sangseon Lee","raw_affiliation_strings":["Department of Computer Science and Engineering , Institute of Engineering Research"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering , Institute of Engineering Research","institution_ids":["https://openalex.org/I4210129773"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101655230","display_name":"Sangsoo Lim","orcid":"https://orcid.org/0000-0003-1737-6242"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sangsoo Lim","raw_affiliation_strings":["Bioinformatics Institute"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101907734","display_name":"Taeheon Lee","orcid":"https://orcid.org/0000-0003-3777-1872"},"institutions":[{"id":"https://openalex.org/I4210129773","display_name":"Institute of Engineering","ror":"https://ror.org/03ny67e60","country_code":"NP","type":"education","lineage":["https://openalex.org/I155028946","https://openalex.org/I4210129773"]}],"countries":["NP"],"is_corresponding":false,"raw_author_name":"Taeheon Lee","raw_affiliation_strings":["Department of Computer Science and Engineering , Institute of Engineering Research"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering , Institute of Engineering Research","institution_ids":["https://openalex.org/I4210129773"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066363757","display_name":"Inyoung Sung","orcid":"https://orcid.org/0000-0002-2681-9722"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Inyoung Sung","raw_affiliation_strings":["Interdisciplinary Program in Bioinformatics , Seoul National University, Seoul 08826, Republic of Korea"],"affiliations":[{"raw_affiliation_string":"Interdisciplinary Program in Bioinformatics , Seoul National University, Seoul 08826, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100460439","display_name":"\ufeffSun Kim","orcid":"https://orcid.org/0000-0001-5385-9546"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210129773","display_name":"Institute of Engineering","ror":"https://ror.org/03ny67e60","country_code":"NP","type":"education","lineage":["https://openalex.org/I155028946","https://openalex.org/I4210129773"]}],"countries":["KR","NP"],"is_corresponding":true,"raw_author_name":"Sun Kim","raw_affiliation_strings":["Bioinformatics Institute","Department of Computer Science and Engineering , Institute of Engineering Research","Interdisciplinary Program in Bioinformatics , Seoul National University, Seoul 08826, Republic of Korea"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering , Institute of Engineering Research","institution_ids":["https://openalex.org/I4210129773"]},{"raw_affiliation_string":"Interdisciplinary Program in Bioinformatics , Seoul National University, Seoul 08826, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100460439"],"corresponding_institution_ids":["https://openalex.org/I139264467","https://openalex.org/I4210129773"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":2.6745,"has_fulltext":false,"cited_by_count":52,"citation_normalized_percentile":{"value":0.90905079,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"36","issue":"12","first_page":"3818","last_page":"3824"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.7754809856414795},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5971674919128418},{"id":"https://openalex.org/keywords/biological-pathway","display_name":"Biological pathway","score":0.5760480761528015},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.5288658738136292},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5034841895103455},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.44245582818984985},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.4420093297958374},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.43405479192733765},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4339154064655304},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.43145740032196045},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.36864739656448364},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3652503788471222},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.356212854385376},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.22609955072402954},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16960832476615906},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.11740222573280334}],"concepts":[{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.7754809856414795},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5971674919128418},{"id":"https://openalex.org/C9927688","wikidata":"https://www.wikidata.org/wiki/Q4915012","display_name":"Biological pathway","level":4,"score":0.5760480761528015},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.5288658738136292},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5034841895103455},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.44245582818984985},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.4420093297958374},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.43405479192733765},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4339154064655304},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.43145740032196045},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.36864739656448364},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3652503788471222},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.356212854385376},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.22609955072402954},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16960832476615906},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.11740222573280334},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa203","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa203","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32207514","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32207514","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6409925085","display_name":null,"funder_award_id":"NRF-2017M3C4A7065887","funder_id":"https://openalex.org/F4320338475","funder_display_name":"H2020 LEIT Information and Communication Technologies"},{"id":"https://openalex.org/G7743804266","display_name":null,"funder_award_id":"NRF2014M3C9A3063541","funder_id":"https://openalex.org/F4320328359","funder_display_name":"Ministry of Science and ICT, South Korea"}],"funders":[{"id":"https://openalex.org/F4320309788","display_name":"Neurosciences Research Foundation","ror":"https://ror.org/05exfab56"},{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320322107","display_name":"Korea Health Industry Development Institute","ror":"https://ror.org/00fdzyk40"},{"id":"https://openalex.org/F4320322120","display_name":"National Research Foundation of Korea","ror":"https://ror.org/013aysd81"},{"id":"https://openalex.org/F4320328359","display_name":"Ministry of Science and ICT, South Korea","ror":"https://ror.org/01wpjm123"},{"id":"https://openalex.org/F4320338475","display_name":"H2020 LEIT Information and Communication Technologies","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":62,"referenced_works":["https://openalex.org/W1560020441","https://openalex.org/W1662382123","https://openalex.org/W1966331733","https://openalex.org/W1977431865","https://openalex.org/W1977839101","https://openalex.org/W1981813507","https://openalex.org/W2058237157","https://openalex.org/W2060022144","https://openalex.org/W2088891952","https://openalex.org/W2096283457","https://openalex.org/W2100625056","https://openalex.org/W2107554353","https://openalex.org/W2114582148","https://openalex.org/W2117007075","https://openalex.org/W2117692326","https://openalex.org/W2119220491","https://openalex.org/W2120261416","https://openalex.org/W2132619562","https://openalex.org/W2134555649","https://openalex.org/W2135957668","https://openalex.org/W2137028359","https://openalex.org/W2143028339","https://openalex.org/W2158787690","https://openalex.org/W2159482845","https://openalex.org/W2163485494","https://openalex.org/W2168133196","https://openalex.org/W2186946811","https://openalex.org/W2332912393","https://openalex.org/W2345356016","https://openalex.org/W2421572543","https://openalex.org/W2429291696","https://openalex.org/W2528491735","https://openalex.org/W2531563875","https://openalex.org/W2559655401","https://openalex.org/W2603603297","https://openalex.org/W2612690371","https://openalex.org/W2624021832","https://openalex.org/W2738632062","https://openalex.org/W2761525601","https://openalex.org/W2766581433","https://openalex.org/W2782454362","https://openalex.org/W2785792383","https://openalex.org/W2786016794","https://openalex.org/W2808223587","https://openalex.org/W2902905881","https://openalex.org/W2905545945","https://openalex.org/W2912198494","https://openalex.org/W2941424978","https://openalex.org/W2964304355","https://openalex.org/W2964311892","https://openalex.org/W2984424339","https://openalex.org/W4210588810","https://openalex.org/W4226065182","https://openalex.org/W4230962320","https://openalex.org/W4236965008","https://openalex.org/W4249723702","https://openalex.org/W4294216483","https://openalex.org/W4389739628","https://openalex.org/W6637178625","https://openalex.org/W6686746579","https://openalex.org/W6759243761","https://openalex.org/W6761924640"],"related_works":["https://openalex.org/W2529615212","https://openalex.org/W3107361973","https://openalex.org/W3087561174","https://openalex.org/W2083488242","https://openalex.org/W4388188394","https://openalex.org/W2163262592","https://openalex.org/W4224243421","https://openalex.org/W2402286330","https://openalex.org/W4391982801","https://openalex.org/W4321600314"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":14},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
