{"id":"https://openalex.org/W3011538428","doi":"https://doi.org/10.1093/bioinformatics/btaa186","title":"\u03ba-helix and the helical lock and key model: a pivotal way of looking at polyproline II","display_name":"\u03ba-helix and the helical lock and key model: a pivotal way of looking at polyproline II","publication_year":2020,"publication_date":"2020-03-13","ids":{"openalex":"https://openalex.org/W3011538428","doi":"https://doi.org/10.1093/bioinformatics/btaa186","mag":"3011538428","pmid":"https://pubmed.ncbi.nlm.nih.gov/32170932"},"language":"en","primary_location":{"id":"doi:10.1093/bioinformatics/btaa186","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa186","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089800773","display_name":"Tomer Meirson","orcid":"https://orcid.org/0000-0002-5011-5477"},"institutions":[{"id":"https://openalex.org/I2799810450","display_name":"Sheba Medical Center","ror":"https://ror.org/020rzx487","country_code":"IL","type":"healthcare","lineage":["https://openalex.org/I2799810450"]},{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Tomer Meirson","raw_affiliation_strings":["Drug Discovery Laboratory , The Azrieli Faculty of Medicine, Bar-Ilan University, Safed 1311502, Israel","Ella Lemelbaum Institute for Immuno-oncology , Sheba Medical Center, Ramat-Gan 526260, Israel"],"affiliations":[{"raw_affiliation_string":"Drug Discovery Laboratory , The Azrieli Faculty of Medicine, Bar-Ilan University, Safed 1311502, Israel","institution_ids":["https://openalex.org/I13955877"]},{"raw_affiliation_string":"Ella Lemelbaum Institute for Immuno-oncology , Sheba Medical Center, Ramat-Gan 526260, Israel","institution_ids":["https://openalex.org/I2799810450"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037839310","display_name":"David Bomze","orcid":"https://orcid.org/0000-0003-2958-7055"},"institutions":[{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"David Bomze","raw_affiliation_strings":["Sackler Faculty of Medicine , Tel Aviv University, Tel Aviv 6997801, Israel"],"affiliations":[{"raw_affiliation_string":"Sackler Faculty of Medicine , Tel Aviv University, Tel Aviv 6997801, Israel","institution_ids":["https://openalex.org/I16391192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043541845","display_name":"Gal Markel","orcid":"https://orcid.org/0000-0003-4835-891X"},"institutions":[{"id":"https://openalex.org/I2799810450","display_name":"Sheba Medical Center","ror":"https://ror.org/020rzx487","country_code":"IL","type":"healthcare","lineage":["https://openalex.org/I2799810450"]},{"id":"https://openalex.org/I16391192","display_name":"Tel Aviv University","ror":"https://ror.org/04mhzgx49","country_code":"IL","type":"education","lineage":["https://openalex.org/I16391192"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Gal Markel","raw_affiliation_strings":["Department of Clinical Microbiology and Immunology , Sackler Faculty of Medicine, Tel Aviv University, Tel-Aviv 6997801, Israel","Ella Lemelbaum Institute for Immuno-oncology , Sheba Medical Center, Ramat-Gan 526260, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Clinical Microbiology and Immunology , Sackler Faculty of Medicine, Tel Aviv University, Tel-Aviv 6997801, Israel","institution_ids":["https://openalex.org/I16391192"]},{"raw_affiliation_string":"Ella Lemelbaum Institute for Immuno-oncology , Sheba Medical Center, Ramat-Gan 526260, Israel","institution_ids":["https://openalex.org/I2799810450"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001115009","display_name":"Abraham O. Samson","orcid":"https://orcid.org/0000-0001-7436-3515"},"institutions":[{"id":"https://openalex.org/I13955877","display_name":"Bar-Ilan University","ror":"https://ror.org/03kgsv495","country_code":"IL","type":"education","lineage":["https://openalex.org/I13955877"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Abraham O Samson","raw_affiliation_strings":["Drug Discovery Laboratory , The Azrieli Faculty of Medicine, Bar-Ilan University, Safed 1311502, Israel"],"affiliations":[{"raw_affiliation_string":"Drug Discovery Laboratory , The Azrieli Faculty of Medicine, Bar-Ilan University, Safed 1311502, Israel","institution_ids":["https://openalex.org/I13955877"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5089800773"],"corresponding_institution_ids":["https://openalex.org/I13955877","https://openalex.org/I2799810450"],"apc_list":{"value":3618,"currency":"USD","value_usd":3618},"apc_paid":null,"fwci":0.7718,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.70840434,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"36","issue":"12","first_page":"3726","last_page":"3732"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/polyproline-helix","display_name":"Polyproline helix","score":0.9581707715988159},{"id":"https://openalex.org/keywords/helix","display_name":"Helix (gastropod)","score":0.6421502828598022},{"id":"https://openalex.org/keywords/sh3-domain","display_name":"SH3 domain","score":0.5844321250915527},{"id":"https://openalex.org/keywords/crystallography","display_name":"Crystallography","score":0.4597516357898712},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.4421420097351074},{"id":"https://openalex.org/keywords/lock","display_name":"Lock (firearm)","score":0.4205426573753357},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.4137575030326843},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3495520353317261},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.34411901235580444},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2642962336540222},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.2146427035331726},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10690200328826904},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10156869888305664}],"concepts":[{"id":"https://openalex.org/C109300003","wikidata":"https://www.wikidata.org/wiki/Q4384651","display_name":"Polyproline helix","level":3,"score":0.9581707715988159},{"id":"https://openalex.org/C2778530040","wikidata":"https://www.wikidata.org/wiki/Q1937315","display_name":"Helix (gastropod)","level":3,"score":0.6421502828598022},{"id":"https://openalex.org/C196347352","wikidata":"https://www.wikidata.org/wiki/Q24771787","display_name":"SH3 domain","level":4,"score":0.5844321250915527},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.4597516357898712},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.4421420097351074},{"id":"https://openalex.org/C174839445","wikidata":"https://www.wikidata.org/wiki/Q1134386","display_name":"Lock (firearm)","level":2,"score":0.4205426573753357},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.4137575030326843},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3495520353317261},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.34411901235580444},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2642962336540222},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.2146427035331726},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10690200328826904},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10156869888305664},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C108636557","wikidata":"https://www.wikidata.org/wiki/Q21109354","display_name":"Proto-oncogene tyrosine-protein kinase Src","level":3,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C184235292","wikidata":"https://www.wikidata.org/wiki/Q421851","display_name":"Kinase","level":2,"score":0.0},{"id":"https://openalex.org/C2779965526","wikidata":"https://www.wikidata.org/wiki/Q308841","display_name":"Snail","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000072756","descriptor_name":"Protein Conformation, alpha-Helical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072756","descriptor_name":"Protein Conformation, alpha-Helical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072756","descriptor_name":"Protein Conformation, alpha-Helical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018909","descriptor_name":"src Homology Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018909","descriptor_name":"src Homology Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018909","descriptor_name":"src Homology Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bioinformatics/btaa186","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bioinformatics/btaa186","pdf_url":null,"source":{"id":"https://openalex.org/S52395412","display_name":"Bioinformatics","issn_l":"1367-4803","issn":["1367-4803","1367-4811"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32170932","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32170932","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bioinformatics (Oxford, England)","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320317064","display_name":"Leir Foundation","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1487195555","https://openalex.org/W1501078874","https://openalex.org/W1964538907","https://openalex.org/W1964686357","https://openalex.org/W1970917173","https://openalex.org/W1972242409","https://openalex.org/W1974225312","https://openalex.org/W1976805246","https://openalex.org/W1989142184","https://openalex.org/W1997828001","https://openalex.org/W2002125560","https://openalex.org/W2004700663","https://openalex.org/W2009578701","https://openalex.org/W2019578585","https://openalex.org/W2021226373","https://openalex.org/W2026600362","https://openalex.org/W2030138948","https://openalex.org/W2031202249","https://openalex.org/W2034093968","https://openalex.org/W2037130336","https://openalex.org/W2047989143","https://openalex.org/W2079088337","https://openalex.org/W2080978882","https://openalex.org/W2083753880","https://openalex.org/W2088065606","https://openalex.org/W2097869477","https://openalex.org/W2105838295","https://openalex.org/W2118567914","https://openalex.org/W2126338511","https://openalex.org/W2134373577","https://openalex.org/W2141153310","https://openalex.org/W2146074801","https://openalex.org/W2154319440","https://openalex.org/W2160517512","https://openalex.org/W2160591382","https://openalex.org/W2163705284","https://openalex.org/W2167499383","https://openalex.org/W2291791304","https://openalex.org/W2543378434","https://openalex.org/W2548252572","https://openalex.org/W2783102765","https://openalex.org/W2883864408","https://openalex.org/W2944807728","https://openalex.org/W2954496204","https://openalex.org/W3101124049","https://openalex.org/W3142467470","https://openalex.org/W4235303711"],"related_works":["https://openalex.org/W2093878568","https://openalex.org/W2037130336","https://openalex.org/W1967448808","https://openalex.org/W1990516841","https://openalex.org/W2520573750","https://openalex.org/W2954496204","https://openalex.org/W2413449995","https://openalex.org/W1969403795","https://openalex.org/W2740239690","https://openalex.org/W2225543639"],"abstract_inverted_index":{"Supplementary":[0],"data":[1],"are":[2],"available":[3],"at":[4],"Bioinformatics":[5],"online.":[6]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
