{"id":"https://openalex.org/W2997680655","doi":"https://doi.org/10.1093/bib/bbz152","title":"DTI-CDF: a cascade deep forest model towards the prediction of drug-target interactions based on hybrid features","display_name":"DTI-CDF: a cascade deep forest model towards the prediction of drug-target interactions based on hybrid features","publication_year":2019,"publication_date":"2019-11-05","ids":{"openalex":"https://openalex.org/W2997680655","doi":"https://doi.org/10.1093/bib/bbz152","mag":"2997680655","pmid":"https://pubmed.ncbi.nlm.nih.gov/31885041"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbz152","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz152","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081142384","display_name":"Yanyi Chu","orcid":"https://orcid.org/0000-0002-4969-3931"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanyi Chu","raw_affiliation_strings":["School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Biotechnology, Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040534841","display_name":"Aman Chandra Kaushik","orcid":"https://orcid.org/0000-0001-7346-0970"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aman Chandra Kaushik","raw_affiliation_strings":["School of Medicine, Jiangnan University, Wuxi, China"],"affiliations":[{"raw_affiliation_string":"School of Medicine, Jiangnan University, Wuxi, China","institution_ids":["https://openalex.org/I111599522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050501150","display_name":"Xiangeng Wang","orcid":"https://orcid.org/0000-0002-2510-7985"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangeng Wang","raw_affiliation_strings":["School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Biotechnology, Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100392089","display_name":"Wei Wang","orcid":"https://orcid.org/0000-0002-8180-2886"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Wang","raw_affiliation_strings":["Mathematical Sciences, Shanghai Jiao Tong University"],"affiliations":[{"raw_affiliation_string":"Mathematical Sciences, Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116337711","display_name":"Yufang Zhang","orcid":"https://orcid.org/0009-0002-8063-7695"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yufang Zhang","raw_affiliation_strings":["School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Biotechnology, Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054760686","display_name":"Xiaoqi Shan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiaoqi Shan","raw_affiliation_strings":["School of Life Sciences and Biotechnology"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Biotechnology","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080199946","display_name":"Dennis R. Salahub","orcid":"https://orcid.org/0000-0002-9848-3762"},"institutions":[{"id":"https://openalex.org/I168635309","display_name":"University of Calgary","ror":"https://ror.org/03yjb2x39","country_code":"CA","type":"education","lineage":["https://openalex.org/I168635309"]},{"id":"https://openalex.org/I2802602770","display_name":"Royal Society of Canada","ror":"https://ror.org/00xya3a34","country_code":"CA","type":"nonprofit","lineage":["https://openalex.org/I2802602770"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Dennis Russell Salahub","raw_affiliation_strings":["Department of Chemistry, University of Calgary, Fellow Royal Society of Canada"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry, University of Calgary, Fellow Royal Society of Canada","institution_ids":["https://openalex.org/I2802602770","https://openalex.org/I168635309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014672057","display_name":"Yi Xiong","orcid":"https://orcid.org/0000-0003-2910-6725"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yi Xiong","raw_affiliation_strings":["School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Biotechnology, Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041491902","display_name":"Dong\u2010Qing Wei","orcid":"https://orcid.org/0000-0003-4200-7502"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dong-Qing Wei","raw_affiliation_strings":["School of Life Sciences and Biotechnology, Shanghai Jiao Tong University"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences and Biotechnology, Shanghai Jiao Tong University","institution_ids":["https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5014672057","https://openalex.org/A5041491902"],"corresponding_institution_ids":["https://openalex.org/I183067930"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":22.5915,"has_fulltext":false,"cited_by_count":211,"citation_normalized_percentile":{"value":0.99660203,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"22","issue":"1","first_page":"451","last_page":"462"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9628999829292297,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9381999969482422,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7399052381515503},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.7191066741943359},{"id":"https://openalex.org/keywords/drugbank","display_name":"DrugBank","score":0.7134727239608765},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5966622233390808},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4946534335613251},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.4362143874168396},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.43126392364501953},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4124109148979187},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.08498546481132507}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7399052381515503},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.7191066741943359},{"id":"https://openalex.org/C155261790","wikidata":"https://www.wikidata.org/wiki/Q1122544","display_name":"DrugBank","level":3,"score":0.7134727239608765},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5966622233390808},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4946534335613251},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4362143874168396},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.43126392364501953},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4124109148979187},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.08498546481132507},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbz152","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz152","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31885041","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31885041","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","score":0.5600000023841858,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G4043378463","display_name":null,"funder_award_id":"61832019","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6060234","display_name":null,"funder_award_id":"61872094","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8237087745","display_name":null,"funder_award_id":"31601074","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8595921090","display_name":null,"funder_award_id":"2016YFA0501703","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":127,"referenced_works":["https://openalex.org/W363319864","https://openalex.org/W1971106435","https://openalex.org/W1984084871","https://openalex.org/W1987219048","https://openalex.org/W1995449922","https://openalex.org/W2012438480","https://openalex.org/W2018340784","https://openalex.org/W2020816856","https://openalex.org/W2033861767","https://openalex.org/W2033906815","https://openalex.org/W2041046391","https://openalex.org/W2048565304","https://openalex.org/W2057195902","https://openalex.org/W2066201825","https://openalex.org/W2079745490","https://openalex.org/W2100672820","https://openalex.org/W2104871495","https://openalex.org/W2106029302","https://openalex.org/W2108069034","https://openalex.org/W2109991441","https://openalex.org/W2126671570","https://openalex.org/W2127249498","https://openalex.org/W2129916980","https://openalex.org/W2135007932","https://openalex.org/W2135209350","https://openalex.org/W2139516171","https://openalex.org/W2139736926","https://openalex.org/W2144000913","https://openalex.org/W2145578524","https://openalex.org/W2148145769","https://openalex.org/W2148426707","https://openalex.org/W2152964937","https://openalex.org/W2153838454","https://openalex.org/W2154718035","https://openalex.org/W2155958387","https://openalex.org/W2161607603","https://openalex.org/W2162011385","https://openalex.org/W2165125496","https://openalex.org/W2167212630","https://openalex.org/W2170146596","https://openalex.org/W2177411254","https://openalex.org/W2178378573","https://openalex.org/W2183717576","https://openalex.org/W2184981123","https://openalex.org/W2233800101","https://openalex.org/W2256119113","https://openalex.org/W2256553158","https://openalex.org/W2259538443","https://openalex.org/W2295598076","https://openalex.org/W2295730657","https://openalex.org/W2297764176","https://openalex.org/W2302413701","https://openalex.org/W2311607323","https://openalex.org/W2336207313","https://openalex.org/W2343107734","https://openalex.org/W2405553925","https://openalex.org/W2407848977","https://openalex.org/W2417990257","https://openalex.org/W2419892062","https://openalex.org/W2471196942","https://openalex.org/W2546726420","https://openalex.org/W2558217333","https://openalex.org/W2558461040","https://openalex.org/W2558825838","https://openalex.org/W2559588208","https://openalex.org/W2563206593","https://openalex.org/W2576544908","https://openalex.org/W2588262534","https://openalex.org/W2592340788","https://openalex.org/W2592742128","https://openalex.org/W2597855421","https://openalex.org/W2607497028","https://openalex.org/W2608761935","https://openalex.org/W2609343280","https://openalex.org/W2620820557","https://openalex.org/W2623060321","https://openalex.org/W2729702682","https://openalex.org/W2729788619","https://openalex.org/W2750547662","https://openalex.org/W2751900761","https://openalex.org/W2753550436","https://openalex.org/W2753953057","https://openalex.org/W2761309784","https://openalex.org/W2770261575","https://openalex.org/W2770663710","https://openalex.org/W2785947426","https://openalex.org/W2791294996","https://openalex.org/W2793951981","https://openalex.org/W2797303008","https://openalex.org/W2805086457","https://openalex.org/W2809216727","https://openalex.org/W2809893308","https://openalex.org/W2888273069","https://openalex.org/W2888696412","https://openalex.org/W2889321024","https://openalex.org/W2891838559","https://openalex.org/W2896829849","https://openalex.org/W2899788782","https://openalex.org/W2902557437","https://openalex.org/W2902630344","https://openalex.org/W2903953910","https://openalex.org/W2904742480","https://openalex.org/W2906507107","https://openalex.org/W2911535432","https://openalex.org/W2911964244","https://openalex.org/W2912358215","https://openalex.org/W2913379687","https://openalex.org/W2914874661","https://openalex.org/W2921814376","https://openalex.org/W2938252891","https://openalex.org/W2940724395","https://openalex.org/W2946853220","https://openalex.org/W2946952196","https://openalex.org/W2951776699","https://openalex.org/W2952522777","https://openalex.org/W2963722686","https://openalex.org/W2964299987","https://openalex.org/W2967967714","https://openalex.org/W3102476541","https://openalex.org/W4301018410","https://openalex.org/W6655478935","https://openalex.org/W6686420396","https://openalex.org/W6697600683","https://openalex.org/W6698064614","https://openalex.org/W6713516400","https://openalex.org/W6754522102","https://openalex.org/W6761952644"],"related_works":["https://openalex.org/W2365158734","https://openalex.org/W2009313526","https://openalex.org/W2465211533","https://openalex.org/W2157969515","https://openalex.org/W129624489","https://openalex.org/W4387804095","https://openalex.org/W2767891136","https://openalex.org/W2137052779","https://openalex.org/W2176533785","https://openalex.org/W4394984040"],"abstract_inverted_index":{"Drug-target":[0],"interactions":[1],"(DTIs)":[2],"play":[3],"a":[4,45,61,73,157],"crucial":[5],"role":[6],"in":[7,135,143],"target-based":[8],"drug":[9],"discovery":[10],"and":[11,32,50,87,173,178,200,206],"development.":[12],"Computational":[13],"prediction":[14,41,64,69],"of":[15,26,37,47,110,118,125,163],"DTIs":[16,191],"can":[17],"effectively":[18],"complement":[19],"experimental":[20,116,148],"wet-lab":[21],"techniques":[22],"for":[23,66],"the":[24,35,38,68,88,96,104,136,144,164,179],"identification":[25],"DTIs,":[27],"which":[28,99,192],"are":[29,139,187,193,209],"typically":[30],"time-":[31],"resource-consuming.":[33],"However,":[34],"performances":[36],"current":[39],"DTI":[40,63,123],"approaches":[42],"suffer":[43],"from":[44,95],"problem":[46],"low":[48],"precision":[49],"high":[51],"false-positive":[52],"rate.":[53],"In":[54,103],"this":[55],"study,":[56],"we":[57,106],"aim":[58],"to":[59,195],"develop":[60],"novel":[62],"method":[65],"improving":[67],"performance":[70,160],"based":[71],"on":[72],"cascade":[74],"deep":[75,175],"forest":[76,172],"(CDF)":[77],"model,":[78],"named":[79],"DTI-CDF,":[80],"with":[81],"multiple":[82],"similarity-based":[83,89],"features":[84,90],"between":[85,91],"drugs":[86,127],"target":[92],"proteins":[93],"extracted":[94],"heterogeneous":[97],"graph,":[98],"contains":[100],"known":[101],"DTIs.":[102],"experiments,":[105],"built":[107],"five":[108],"replicates":[109],"10-fold":[111],"cross-validation":[112],"under":[113],"three":[114],"different":[115],"settings":[117],"data":[119,204],"sets,":[120],"namely,":[121],"corresponding":[122],"values":[124],"certain":[126],"(SD),":[128],"targets":[129],"(ST),":[130],"or":[131],"drug-target":[132],"pairs":[133],"(SP)":[134],"training":[137],"sets":[138,205],"missed":[140],"but":[141],"existed":[142],"test":[145],"sets.":[146],"The":[147,203],"results":[149],"demonstrate":[150],"that":[151,162],"our":[152],"proposed":[153],"approach":[154],"DTI-CDF":[155],"achieves":[156],"significantly":[158],"higher":[159],"than":[161],"traditional":[165],"ensemble":[166],"learning-based":[167],"methods":[168,181],"such":[169,182],"as":[170,183],"random":[171],"XGBoost,":[174],"neural":[176],"network,":[177],"state-of-the-art":[180],"DDR.":[184],"Furthermore,":[185],"there":[186],"1352":[188],"newly":[189],"predicted":[190],"proved":[194],"be":[196],"correct":[197],"by":[198],"KEGG":[199],"DrugBank":[201],"databases.":[202],"source":[207],"code":[208],"freely":[210],"available":[211],"at":[212],"https://github.com//a96123155/DTI-CDF.":[213]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":22},{"year":2024,"cited_by_count":34},{"year":2023,"cited_by_count":39},{"year":2022,"cited_by_count":40},{"year":2021,"cited_by_count":41},{"year":2020,"cited_by_count":31},{"year":2019,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
