{"id":"https://openalex.org/W2993893341","doi":"https://doi.org/10.1093/bib/bbz141","title":"LARMD: integration of bioinformatic resources to profile ligand-driven protein dynamics with a case on the activation of estrogen receptor","display_name":"LARMD: integration of bioinformatic resources to profile ligand-driven protein dynamics with a case on the activation of estrogen receptor","publication_year":2019,"publication_date":"2019-10-16","ids":{"openalex":"https://openalex.org/W2993893341","doi":"https://doi.org/10.1093/bib/bbz141","mag":"2993893341","pmid":"https://pubmed.ncbi.nlm.nih.gov/31799600"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbz141","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz141","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041577726","display_name":"Jing\u2010Fang Yang","orcid":"https://orcid.org/0000-0002-3507-1664"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing-Fang Yang","raw_affiliation_strings":["International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China"],"affiliations":[{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049437380","display_name":"Fan Wang","orcid":"https://orcid.org/0000-0003-2664-9214"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fan Wang","raw_affiliation_strings":["International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China"],"affiliations":[{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077700312","display_name":"Yu Chen","orcid":"https://orcid.org/0000-0002-5473-8022"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yu-Zong Chen","raw_affiliation_strings":["Department of Pharmacy, National University of Singapore, 18 Science Drive 4, Singapore 117543"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, National University of Singapore, 18 Science Drive 4, Singapore 117543","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068847247","display_name":"Ge\u2010Fei Hao","orcid":"https://orcid.org/0000-0003-4090-8411"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]},{"id":"https://openalex.org/I178232147","display_name":"Guizhou University","ror":"https://ror.org/02wmsc916","country_code":"CN","type":"education","lineage":["https://openalex.org/I178232147"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ge-Fei Hao","raw_affiliation_strings":["International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang 550025, P. R. China","International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China"],"affiliations":[{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Research and Development Center for Fine Chemicals, Guizhou University, Guiyang 550025, P. R. China","institution_ids":["https://openalex.org/I178232147"]},{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102707897","display_name":"Guang\u2010Fu Yang","orcid":"https://orcid.org/0000-0003-4384-2593"},"institutions":[{"id":"https://openalex.org/I4210151209","display_name":"Collaborative Innovation Center of Chemical Science and Engineering Tianjin","ror":"https://ror.org/0225a5s12","country_code":"CN","type":"facility","lineage":["https://openalex.org/I162868743","https://openalex.org/I205237279","https://openalex.org/I4210151209"]},{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guang-Fu Yang","raw_affiliation_strings":["Collaborative Innovation Center of Chemical Science and Engineering, Tianjing 300072, P.R.China","International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China"],"affiliations":[{"raw_affiliation_string":"Collaborative Innovation Center of Chemical Science and Engineering, Tianjing 300072, P.R.China","institution_ids":["https://openalex.org/I4210151209"]},{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University\uff0cWuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"Key Laboratory of Pesticide & Chemical Biology, Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, P.R.China","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"International Joint Research Center for Intelligent Biosensor Technology and Health, Central China Normal University,Wuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5068847247","https://openalex.org/A5102707897"],"corresponding_institution_ids":["https://openalex.org/I178232147","https://openalex.org/I40963666","https://openalex.org/I4210151209"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":20.1883,"has_fulltext":false,"cited_by_count":137,"citation_normalized_percentile":{"value":0.99586531,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"21","issue":"6","first_page":"2206","last_page":"2218"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10375","display_name":"Pharmacogenetics and Drug Metabolism","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/3004","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5969334840774536},{"id":"https://openalex.org/keywords/estrogen-receptor","display_name":"Estrogen receptor","score":0.5677826404571533},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4654698371887207},{"id":"https://openalex.org/keywords/ligand","display_name":"Ligand (biochemistry)","score":0.4555952548980713},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4371945261955261},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.4166591763496399},{"id":"https://openalex.org/keywords/agonist","display_name":"Agonist","score":0.4148324131965637},{"id":"https://openalex.org/keywords/g-protein-coupled-receptor","display_name":"G protein-coupled receptor","score":0.4121250510215759},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.40741217136383057},{"id":"https://openalex.org/keywords/signal-transduction","display_name":"Signal transduction","score":0.3807477056980133},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.37433919310569763},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3399626612663269},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2923022508621216},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.2099563479423523},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.14588534832000732},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09774219989776611},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.07858681678771973}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5969334840774536},{"id":"https://openalex.org/C84606932","wikidata":"https://www.wikidata.org/wiki/Q416496","display_name":"Estrogen receptor","level":4,"score":0.5677826404571533},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4654698371887207},{"id":"https://openalex.org/C116569031","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Ligand (biochemistry)","level":3,"score":0.4555952548980713},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4371945261955261},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.4166591763496399},{"id":"https://openalex.org/C2778938600","wikidata":"https://www.wikidata.org/wiki/Q389934","display_name":"Agonist","level":3,"score":0.4148324131965637},{"id":"https://openalex.org/C135285700","wikidata":"https://www.wikidata.org/wiki/Q38173","display_name":"G protein-coupled receptor","level":3,"score":0.4121250510215759},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.40741217136383057},{"id":"https://openalex.org/C62478195","wikidata":"https://www.wikidata.org/wiki/Q828130","display_name":"Signal transduction","level":2,"score":0.3807477056980133},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.37433919310569763},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3399626612663269},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2923022508621216},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.2099563479423523},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.14588534832000732},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09774219989776611},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.07858681678771973},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D047628","descriptor_name":"Estrogen Receptor alpha","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047628","descriptor_name":"Estrogen Receptor alpha","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047628","descriptor_name":"Estrogen Receptor alpha","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047628","descriptor_name":"Estrogen Receptor alpha","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D047628","descriptor_name":"Estrogen Receptor alpha","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D047628","descriptor_name":"Estrogen Receptor alpha","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D047629","descriptor_name":"Estrogen Receptor beta","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047629","descriptor_name":"Estrogen Receptor beta","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047629","descriptor_name":"Estrogen Receptor beta","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D047629","descriptor_name":"Estrogen Receptor beta","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D047629","descriptor_name":"Estrogen Receptor beta","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D047629","descriptor_name":"Estrogen Receptor beta","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbz141","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz141","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31799600","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31799600","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmid:31996905","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31996905","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7733190081","display_name":null,"funder_award_id":"2017YFD0200501","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8055502062","display_name":null,"funder_award_id":"21772059, 91853127, and 31960548","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":107,"referenced_works":["https://openalex.org/W1637465330","https://openalex.org/W1966677073","https://openalex.org/W1974635207","https://openalex.org/W1976499671","https://openalex.org/W1977258623","https://openalex.org/W1978159078","https://openalex.org/W1979898922","https://openalex.org/W1983104192","https://openalex.org/W1989573061","https://openalex.org/W1997477098","https://openalex.org/W2000326956","https://openalex.org/W2007268492","https://openalex.org/W2012443018","https://openalex.org/W2019109910","https://openalex.org/W2019465613","https://openalex.org/W2023125910","https://openalex.org/W2024762727","https://openalex.org/W2025190578","https://openalex.org/W2027408247","https://openalex.org/W2028231353","https://openalex.org/W2034329390","https://openalex.org/W2037535298","https://openalex.org/W2038532826","https://openalex.org/W2042526895","https://openalex.org/W2042757390","https://openalex.org/W2048822589","https://openalex.org/W2052459433","https://openalex.org/W2053599146","https://openalex.org/W2054429963","https://openalex.org/W2062244421","https://openalex.org/W2063115321","https://openalex.org/W2066926304","https://openalex.org/W2067484324","https://openalex.org/W2067763399","https://openalex.org/W2067963143","https://openalex.org/W2070359441","https://openalex.org/W2073353512","https://openalex.org/W2073883348","https://openalex.org/W2076949721","https://openalex.org/W2083369329","https://openalex.org/W2083426370","https://openalex.org/W2086895013","https://openalex.org/W2093221728","https://openalex.org/W2101766243","https://openalex.org/W2102211745","https://openalex.org/W2103420861","https://openalex.org/W2104293738","https://openalex.org/W2104420868","https://openalex.org/W2105779105","https://openalex.org/W2107268733","https://openalex.org/W2112154906","https://openalex.org/W2112315506","https://openalex.org/W2118233996","https://openalex.org/W2122576346","https://openalex.org/W2123681603","https://openalex.org/W2125624687","https://openalex.org/W2127821584","https://openalex.org/W2128688106","https://openalex.org/W2130541969","https://openalex.org/W2132262459","https://openalex.org/W2133620840","https://openalex.org/W2137822079","https://openalex.org/W2137825366","https://openalex.org/W2137974866","https://openalex.org/W2139942857","https://openalex.org/W2142868265","https://openalex.org/W2147752484","https://openalex.org/W2147988069","https://openalex.org/W2147993766","https://openalex.org/W2149302140","https://openalex.org/W2149801992","https://openalex.org/W2149830121","https://openalex.org/W2150981663","https://openalex.org/W2151888740","https://openalex.org/W2154319440","https://openalex.org/W2165414288","https://openalex.org/W2165565773","https://openalex.org/W2167240118","https://openalex.org/W2218941725","https://openalex.org/W2252607141","https://openalex.org/W2321640944","https://openalex.org/W2332712348","https://openalex.org/W2334874683","https://openalex.org/W2342674011","https://openalex.org/W2345718491","https://openalex.org/W2345719659","https://openalex.org/W2404280981","https://openalex.org/W2411580022","https://openalex.org/W2479741218","https://openalex.org/W2524455268","https://openalex.org/W2540491215","https://openalex.org/W2544136853","https://openalex.org/W2582743722","https://openalex.org/W2605604484","https://openalex.org/W2619817401","https://openalex.org/W2728165287","https://openalex.org/W2770896051","https://openalex.org/W2791374058","https://openalex.org/W2794971458","https://openalex.org/W2801697388","https://openalex.org/W2835938797","https://openalex.org/W2896914402","https://openalex.org/W2913905751","https://openalex.org/W3105581675","https://openalex.org/W6636641735","https://openalex.org/W6661018541","https://openalex.org/W7075630220"],"related_works":["https://openalex.org/W3011298851","https://openalex.org/W4224216382","https://openalex.org/W3195483439","https://openalex.org/W2169619547","https://openalex.org/W2444295418","https://openalex.org/W416861399","https://openalex.org/W4310603295","https://openalex.org/W4391340242","https://openalex.org/W3156551585","https://openalex.org/W2171194536"],"abstract_inverted_index":{"Protein":[0],"dynamics":[1,23,62],"is":[2,33,63,82],"central":[3],"to":[4,25,36,49,67,74,88,92,110,140,215,223],"all":[5],"biological":[6,14],"processes,":[7],"including":[8],"signal":[9],"transduction,":[10],"cellular":[11],"regulation":[12],"and":[13,59,94,116,122,155,167,189,222],"catalysis.":[15],"Among":[16],"them,":[17],"in-depth":[18],"exploration":[19],"of":[20,29,43,85,152,158,172,182,195,220],"ligand-driven":[21,96,126],"protein":[22,30,61,97,127,221],"contributes":[24],"an":[26],"optimal":[27],"understanding":[28],"function,":[31],"which":[32,144],"particularly":[34],"relevant":[35],"drug":[37],"discovery.":[38],"Hence,":[39],"a":[40,83,112,138,146,211],"wide":[41],"range":[42],"computational":[44,200],"tools":[45,109],"have":[46],"been":[47],"designed":[48],"investigate":[50,93],"the":[51,68,150,170,175,193,205,217],"important":[52],"dynamic":[53,218],"information":[54],"in":[55,102,149,160,169],"proteins.":[56],"However,":[57],"performing":[58],"analyzing":[60],"still":[64],"challenging":[65],"due":[66],"complicated":[69],"operation":[70],"steps,":[71],"giving":[72],"rise":[73],"great":[75],"difficulty,":[76],"especially":[77,180],"for":[78,124,178],"nonexperts.":[79],"Moreover,":[80],"there":[81],"lack":[84],"web":[86],"protocol":[87,214],"provide":[89],"online":[90,213],"facility":[91],"visualize":[95],"dynamics.":[98,128],"To":[99,129],"this":[100,103],"end,":[101],"study,":[104],"we":[105],"integrated":[106],"several":[107],"bioinformatic":[108],"develop":[111],"protocol,":[113],"named":[114],"Ligand":[115],"Receptor":[117],"Molecular":[118],"Dynamics":[119],"(LARMD,":[120],"http://chemyang.ccnu.edu.cn/ccb/server/LARMD/":[121],"http://agroda.gzu.edu.cn:9999/ccb/server/LARMD/),":[123],"profiling":[125],"be":[130],"specific,":[131],"estrogen":[132],"receptor":[133],"(ER)":[134],"was":[135],"used":[136],"as":[137],"case":[139],"reveal":[141],"ER\u03b2-selective":[142],"mechanism,":[143],"plays":[145],"vital":[147],"role":[148],"treatment":[151],"inflammatory":[153],"diseases":[154],"many":[156],"types":[157],"cancers":[159],"clinical":[161],"practice.":[162],"Two":[163],"different":[164],"residues":[165],"(Ile373/Met421":[166],"Met336/Leu384)":[168],"pocket":[171],"ER\u03b2/ER\u03b1":[173],"were":[174,202],"significant":[176],"determinants":[177],"selectivity,":[179],"Met336":[181],"ER\u03b2.":[183],"The":[184],"helix":[185,187],"H8,":[186],"H11":[188],"H7-H8":[190],"loop":[191],"influenced":[192],"migration":[194],"selective":[196],"agonist":[197],"(WAY-244).":[198],"These":[199],"results":[201],"consistent":[203],"with":[204],"experimental":[206],"results.":[207],"Therefore,":[208],"LARMD":[209],"provides":[210],"user-friendly":[212],"study":[216],"property":[219],"design":[224],"new":[225],"ligand":[226],"or":[227],"site-directed":[228],"mutagenesis.":[229]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":11},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":23},{"year":2021,"cited_by_count":47},{"year":2020,"cited_by_count":31}],"updated_date":"2026-03-04T09:10:02.777135","created_date":"2019-12-13T00:00:00"}
