{"id":"https://openalex.org/W2992858093","doi":"https://doi.org/10.1093/bib/bbz113","title":"Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer","display_name":"Identification and comprehensive characterization of lncRNAs with copy number variations and their driving transcriptional perturbed subpathways reveal functional significance for cancer","publication_year":2019,"publication_date":"2019-08-23","ids":{"openalex":"https://openalex.org/W2992858093","doi":"https://doi.org/10.1093/bib/bbz113","mag":"2992858093","pmid":"https://pubmed.ncbi.nlm.nih.gov/31792500"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbz113","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz113","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101743995","display_name":"Yanjun Xu","orcid":"https://orcid.org/0000-0002-6552-4476"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanjun Xu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000466107","display_name":"Tan Wu","orcid":"https://orcid.org/0000-0003-1746-754X"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tan Wu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100600155","display_name":"Feng Li","orcid":"https://orcid.org/0000-0003-3636-2962"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Li","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035734524","display_name":"Qun Dong","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qun Dong","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100461878","display_name":"Jingwen Wang","orcid":"https://orcid.org/0000-0002-3450-9046"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingwen Wang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059333386","display_name":"Desi Shang","orcid":"https://orcid.org/0000-0002-9141-393X"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Desi Shang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002215588","display_name":"Yingqi Xu","orcid":"https://orcid.org/0000-0001-6879-639X"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yingqi Xu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018503742","display_name":"Chunlong Zhang","orcid":"https://orcid.org/0000-0002-1164-8182"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chunlong Zhang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016343304","display_name":"Yiying Dou","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yiying Dou","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025348600","display_name":"Congxue Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Congxue Hu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102890198","display_name":"Haixiu Yang","orcid":"https://orcid.org/0000-0002-7161-1656"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haixiu Yang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021471862","display_name":"Xuan Zheng","orcid":"https://orcid.org/0000-0001-9147-2828"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuan Zheng","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100457283","display_name":"Yunpeng Zhang","orcid":"https://orcid.org/0000-0003-3547-9720"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yunpeng Zhang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100382747","display_name":"Lihua Wang","orcid":"https://orcid.org/0000-0003-2782-4010"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I4210132813","display_name":"Second Affiliated Hospital of Harbin Medical University","ror":"https://ror.org/03s8txj32","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210132813"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lihua Wang","raw_affiliation_strings":["Department of Neurology, The Second Affiliated Hospital, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurology, The Second Affiliated Hospital, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I4210132813"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100445596","display_name":"Xia Li","orcid":"https://orcid.org/0000-0002-9794-2648"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xia Li","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5100382747","https://openalex.org/A5100445596","https://openalex.org/A5100457283"],"corresponding_institution_ids":["https://openalex.org/I156144747","https://openalex.org/I4210132813"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.4572,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.57987425,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"21","issue":"6","first_page":"2153","last_page":"2166"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/copy-number-variation","display_name":"Copy-number variation","score":0.8061468601226807},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6268360614776611},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5371940732002258},{"id":"https://openalex.org/keywords/carcinogenesis","display_name":"Carcinogenesis","score":0.4840204417705536},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.46176260709762573},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3589385449886322},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3539605736732483},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.10757005214691162}],"concepts":[{"id":"https://openalex.org/C120821319","wikidata":"https://www.wikidata.org/wiki/Q1501491","display_name":"Copy-number variation","level":4,"score":0.8061468601226807},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6268360614776611},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5371940732002258},{"id":"https://openalex.org/C555283112","wikidata":"https://www.wikidata.org/wiki/Q1637543","display_name":"Carcinogenesis","level":3,"score":0.4840204417705536},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.46176260709762573},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3589385449886322},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3539605736732483},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.10757005214691162}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056915","descriptor_name":"DNA Copy Number Variations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D063646","descriptor_name":"Carcinogenesis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D063646","descriptor_name":"Carcinogenesis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D063646","descriptor_name":"Carcinogenesis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbz113","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz113","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31792500","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31792500","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3667356456","display_name":null,"funder_award_id":"61603116","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5193609024","display_name":"\u91cd\u5927\u75be\u75c5\u57fa\u56e0\u7ec4\u4e0e\u8868\u89c2\u7ec4\u6539\u53d8\u9a71\u52a8\u7684\u975e\u7f16\u7801RNA(miRNA/lncRNA)\u8c03\u63a7\u673a\u5236\u53ca\u5176\u529f\u80fd\u7814\u7a76","funder_award_id":"61873075","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5424097632","display_name":null,"funder_award_id":"31801107","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7819028244","display_name":null,"funder_award_id":"2018YFC2000100","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8992865106","display_name":"\u975e\u7f16\u7801RNA\u4ecb\u5bfc\u7684\u5168\u5c40isoform\u7f51\u7edc\u6784\u5efa\u53ca\u9057\u4f20\u6548\u5e94\u9a71\u52a8\u7684\u80bf\u7624\u9884\u540e\u901a\u8def\u533a\u57df\u548c\u6807\u5fd7\u7269\u8bc6\u522b\u7814\u7a76","funder_award_id":"31701145","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W217432650","https://openalex.org/W1865845132","https://openalex.org/W1889514258","https://openalex.org/W1966327575","https://openalex.org/W2004144597","https://openalex.org/W2006358633","https://openalex.org/W2014974052","https://openalex.org/W2019801716","https://openalex.org/W2023155906","https://openalex.org/W2034269086","https://openalex.org/W2038667694","https://openalex.org/W2042778855","https://openalex.org/W2055550188","https://openalex.org/W2067768332","https://openalex.org/W2082080058","https://openalex.org/W2087291909","https://openalex.org/W2088301374","https://openalex.org/W2096465161","https://openalex.org/W2100582962","https://openalex.org/W2103017472","https://openalex.org/W2111413836","https://openalex.org/W2112012611","https://openalex.org/W2119034410","https://openalex.org/W2119220491","https://openalex.org/W2122863289","https://openalex.org/W2123021448","https://openalex.org/W2136120736","https://openalex.org/W2138370010","https://openalex.org/W2140416663","https://openalex.org/W2140883620","https://openalex.org/W2154361640","https://openalex.org/W2157852151","https://openalex.org/W2159380507","https://openalex.org/W2165674132","https://openalex.org/W2170061976","https://openalex.org/W2270152626","https://openalex.org/W2289297923","https://openalex.org/W2397759082","https://openalex.org/W2462053388","https://openalex.org/W2510265744","https://openalex.org/W2519942994","https://openalex.org/W2604820680","https://openalex.org/W2724571272","https://openalex.org/W2746029483","https://openalex.org/W2765722748","https://openalex.org/W2774753208","https://openalex.org/W2796408191","https://openalex.org/W2888800941","https://openalex.org/W2895679848","https://openalex.org/W2899830787","https://openalex.org/W2902132324","https://openalex.org/W2908571759","https://openalex.org/W2911280075","https://openalex.org/W2924468204","https://openalex.org/W3084492169"],"related_works":["https://openalex.org/W3118014344","https://openalex.org/W2160911017","https://openalex.org/W2763474833","https://openalex.org/W2387464095","https://openalex.org/W2507940864","https://openalex.org/W1526237818","https://openalex.org/W4281746656","https://openalex.org/W2030481069","https://openalex.org/W2106650442","https://openalex.org/W2034625591"],"abstract_inverted_index":{"Numerous":[0],"studies":[1],"have":[2,67],"shown":[3],"that":[4,130],"copy":[5,42],"number":[6,43],"variation":[7,44],"(CNV)":[8],"in":[9,15,91,124,189],"lncRNA":[10],"regions":[11],"play":[12],"critical":[13],"roles":[14],"the":[16,71,119,169,210,216],"initiation":[17],"and":[18,46,62,79,83,93,107,145,151,162,185,196,200,204,215],"progression":[19],"of":[20,57,64,122,172,212,218],"cancer.":[21,58],"However,":[22],"our":[23,65],"knowledge":[24],"about":[25],"their":[26,47,186,201],"functionalities":[27,211],"is":[28],"still":[29],"limited.":[30],"Here,":[31],"we":[32,175],"firstly":[33],"provided":[34],"a":[35,80,152,177],"computational":[36],"method":[37,66,72],"to":[38,75],"identify":[39],"lncRNAs":[40],"with":[41,95],"(lncRNAs-CNV)":[45],"driving":[48,160,170,187,202],"transcriptional":[49],"perturbed":[50,111],"subpathways":[51,106,117,161,188,203],"by":[52,112],"integrating":[53],"multidimensional":[54],"omics":[55],"data":[56],"The":[59],"high":[60,89,96],"reliability":[61],"accuracy":[63],"been":[68],"demonstrated.":[69],"Then,":[70],"was":[73,85],"applied":[74],"14":[76],"cancer":[77,108,163,191],"types,":[78],"comprehensive":[81],"characterization":[82],"analysis":[84,128],"performed.":[86],"LncRNAs-CNV":[87],"had":[88],"specificity":[90],"cancers,":[92],"those":[94],"CNV":[97],"level":[98],"may":[99],"perturb":[100],"broad":[101],"biological":[102],"functions.":[103],"Some":[104],"core":[105],"hallmarks":[109,164],"widely":[110],"lncRNAs-CNV":[113,123,132,184,199],"were":[114,165],"revealed.":[115],"Moreover,":[116],"highlighted":[118],"functional":[120,131,153],"diversity":[121],"various":[125,190],"cancers.":[126],"Survival":[127],"indicated":[129],"could":[133],"be":[134],"candidate":[135],"prognostic":[136],"biomarkers":[137],"for":[138,167,182,208],"clinical":[139],"applications,":[140],"such":[141],"as":[142],"ST7-AS1,":[143],"CDKN2B-AS1":[144],"EGFR-AS1.":[146],"In":[147],"addition,":[148],"cascade":[149],"responses":[150],"crosstalk":[154],"model":[155],"among":[156],"lncRNAs-CNV,":[157],"impacted":[158],"genes,":[159],"proposed":[166],"understanding":[168],"mechanism":[171],"lncRNAs-CNV.":[173],"Finally,":[174],"developed":[176],"user-friendly":[178],"web":[179],"interface-LncCASE":[180],"(http://bio-bigdata.hrbmu.edu.cn/LncCASE/)":[181],"exploring":[183],"types.":[192],"Our":[193],"study":[194],"identified":[195],"systematically":[197],"characterized":[198],"presented":[205],"valuable":[206],"resources":[207],"investigating":[209],"non-coding":[213],"variations":[214],"mechanisms":[217],"tumorigenesis.":[219]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
