{"id":"https://openalex.org/W2968441471","doi":"https://doi.org/10.1093/bib/bbz073","title":"Location deviations of DNA functional elements affected SNP mapping in the published databases and references","display_name":"Location deviations of DNA functional elements affected SNP mapping in the published databases and references","publication_year":2019,"publication_date":"2019-06-01","ids":{"openalex":"https://openalex.org/W2968441471","doi":"https://doi.org/10.1093/bib/bbz073","mag":"2968441471","pmid":"https://pubmed.ncbi.nlm.nih.gov/31392334"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbz073","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz073","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055535195","display_name":"Hewei Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hewei Zheng","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028817139","display_name":"Xueying Zhao","orcid":"https://orcid.org/0000-0003-0857-2823"},"institutions":[{"id":"https://openalex.org/I1302978242","display_name":"Academy of Medical Sciences","ror":"https://ror.org/00c489v88","country_code":"GB","type":"nonprofit","lineage":["https://openalex.org/I1302978242"]},{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I4210147887","display_name":"Institute of Hematology & Blood Diseases Hospital","ror":"https://ror.org/04n16t016","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210147887"]}],"countries":["CN","GB"],"is_corresponding":false,"raw_author_name":"Xueying Zhao","raw_affiliation_strings":["Institute of Hematology and Blood Diseases Hospital, Chinese Academy of Medical Sciences"],"affiliations":[{"raw_affiliation_string":"Institute of Hematology and Blood Diseases Hospital, Chinese Academy of Medical Sciences","institution_ids":["https://openalex.org/I4210147887","https://openalex.org/I1302978242","https://openalex.org/I200296433"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058731393","display_name":"Hong Wang","orcid":"https://orcid.org/0000-0001-6649-649X"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Hong Wang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, P R China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, P R China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033280910","display_name":"Yu Ding","orcid":"https://orcid.org/0000-0003-1246-2563"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Ding","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100682886","display_name":"Xiaoyan Lu","orcid":"https://orcid.org/0000-0003-2534-8575"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoyan Lu","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004403062","display_name":"Guosi Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guosi Zhang","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100686590","display_name":"Jiaxin Yang","orcid":"https://orcid.org/0000-0003-3139-7373"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiaxin Yang","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037204529","display_name":"Lianzong Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lianzong Wang","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115594786","display_name":"Haotian Zhang","orcid":"https://orcid.org/0009-0008-1415-6221"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haotian Zhang","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074576528","display_name":"Yu Bai","orcid":"https://orcid.org/0000-0002-8237-9514"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Bai","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100336756","display_name":"Jing Li","orcid":"https://orcid.org/0000-0001-5697-9527"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Li","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110966342","display_name":"Jingqi Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingqi Wu","raw_affiliation_strings":["Harbin Medical University and Wenzhou Medical University"],"affiliations":[{"raw_affiliation_string":"Harbin Medical University and Wenzhou Medical University","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014679656","display_name":"Yongshuai Jiang","orcid":"https://orcid.org/0000-0002-7163-6554"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yongshuai Jiang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, P. R. China"],"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, P. R. China","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034047362","display_name":"Liangde Xu","orcid":"https://orcid.org/0000-0003-0965-9955"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]},{"id":"https://openalex.org/I4210086973","display_name":"Affiliated Eye Hospital of Wenzhou Medical College","ror":"https://ror.org/000sxmx78","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210086973"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Liangde Xu","raw_affiliation_strings":["School of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou 325027, and Training Center for Students Innovation and Entrepreneurship Education, Harbin Medical University, Harbin 150081, P. R. China"],"affiliations":[{"raw_affiliation_string":"School of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou 325027, and Training Center for Students Innovation and Entrepreneurship Education, Harbin Medical University, Harbin 150081, P. R. China","institution_ids":["https://openalex.org/I4210086973","https://openalex.org/I27781120","https://openalex.org/I156144747"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5014679656","https://openalex.org/A5034047362","https://openalex.org/A5058731393"],"corresponding_institution_ids":["https://openalex.org/I156144747","https://openalex.org/I27781120","https://openalex.org/I4210086973"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.3426,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.59588484,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":93,"max":96},"biblio":{"volume":"21","issue":"4","first_page":"1293","last_page":"1301"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.6547673344612122},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6015530824661255},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.5893667340278625},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5541441440582275},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.5228074789047241},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5061179995536804},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.49164873361587524},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.47236472368240356},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.45739731192588806},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4186440110206604},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3328063488006592},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3099300265312195}],"concepts":[{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.6547673344612122},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6015530824661255},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.5893667340278625},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5541441440582275},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.5228074789047241},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5061179995536804},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.49164873361587524},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.47236472368240356},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.45739731192588806},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4186440110206604},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3328063488006592},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3099300265312195}],"mesh":[{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbz073","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbz073","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31392334","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31392334","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1302754586","display_name":null,"funder_award_id":"31801098","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4517684671","display_name":null,"funder_award_id":"91746113","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5109417356","display_name":null,"funder_award_id":"RC2013QN004112","funder_id":"https://openalex.org/F4320326687","funder_display_name":"Harbin Science and Technology Bureau"},{"id":"https://openalex.org/G5717381257","display_name":null,"funder_award_id":"31501062","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320326687","display_name":"Harbin Science and Technology Bureau","ror":"https://ror.org/03qdcb993"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W1509222088","https://openalex.org/W1513515886","https://openalex.org/W1958673254","https://openalex.org/W1973234126","https://openalex.org/W2020391744","https://openalex.org/W2052218386","https://openalex.org/W2058401000","https://openalex.org/W2066255572","https://openalex.org/W2074386860","https://openalex.org/W2090705041","https://openalex.org/W2092328174","https://openalex.org/W2100428244","https://openalex.org/W2102236737","https://openalex.org/W2111843859","https://openalex.org/W2112192177","https://openalex.org/W2114907022","https://openalex.org/W2122232025","https://openalex.org/W2122719226","https://openalex.org/W2125040336","https://openalex.org/W2131581981","https://openalex.org/W2159733098","https://openalex.org/W2168783124","https://openalex.org/W2170551349","https://openalex.org/W2200223817","https://openalex.org/W2247766769","https://openalex.org/W2329659234","https://openalex.org/W2336973027","https://openalex.org/W2338137842","https://openalex.org/W2502770791","https://openalex.org/W2576046690","https://openalex.org/W2580314844","https://openalex.org/W2589683837","https://openalex.org/W2616754551","https://openalex.org/W2773532330","https://openalex.org/W2799620190","https://openalex.org/W2811451736","https://openalex.org/W2900426420","https://openalex.org/W2914256318","https://openalex.org/W2922076381","https://openalex.org/W4242712751","https://openalex.org/W6630856392","https://openalex.org/W6751269055","https://openalex.org/W6760928807"],"related_works":["https://openalex.org/W2921363728","https://openalex.org/W2279684808","https://openalex.org/W1969895229","https://openalex.org/W3217304749","https://openalex.org/W2066142713","https://openalex.org/W2894932706","https://openalex.org/W2108497208","https://openalex.org/W2767606877","https://openalex.org/W2133994800","https://openalex.org/W2289136766"],"abstract_inverted_index":{"The":[0],"recent":[1],"extensive":[2],"application":[3],"of":[4,13,16,25,30,39,87,98,108],"next-generation":[5],"sequencing":[6],"has":[7,37],"led":[8],"to":[9,77,100],"the":[10,23,28,47,53,83,96,106,118],"rapid":[11],"accumulation":[12],"multiple":[14],"types":[15],"data":[17],"for":[18,121],"functional":[19,122],"DNA":[20,55,123],"elements.":[21],"With":[22],"advent":[24],"precision":[26],"medicine,":[27],"fine-mapping":[29],"risk":[31],"loci":[32],"based":[33],"on":[34,82,95],"these":[35,75],"elements":[36,76,124],"become":[38],"paramount":[40],"importance.":[41],"In":[42],"this":[43],"study,":[44],"we":[45],"obtained":[46],"human":[48],"reference":[49],"genome":[50],"(GRCh38)":[51],"and":[52,63,138],"main":[54],"sequence":[56,89,142],"elements,":[57],"including":[58],"protein-coding":[59],"genes,":[60],"miRNAs,":[61],"lncRNAs":[62],"single":[64],"nucleotide":[65],"polymorphism":[66],"flanking":[67],"sequences,":[68],"from":[69],"different":[70],"repositories.":[71],"We":[72],"then":[73],"realigned":[74],"identify":[78],"their":[79],"exact":[80],"locations":[81,91],"genome.":[84],"Overall,":[85],"5%-20%":[86],"all":[88],"element":[90,145],"deviated":[92],"among":[93,127],"databases,":[94],"scale":[97],"kilobase-pair":[99],"megabase-pair.":[101],"These":[102],"deviations":[103],"even":[104],"affected":[105],"selection":[107],"genome-wide":[109],"association":[110],"study":[111],"risk-associated":[112],"genes.":[113],"Our":[114],"results":[115],"implied":[116],"that":[117],"location":[119],"information":[120],"may":[125],"deviate":[126],"public":[128],"databases.":[129],"Researchers":[130],"should":[131,139],"take":[132],"care":[133],"when":[134],"using":[135],"cross-database":[136],"sources":[137],"perform":[140],"pilot":[141],"alignments":[143],"before":[144],"location-based":[146],"studies.":[147]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
