{"id":"https://openalex.org/W2910249797","doi":"https://doi.org/10.1093/bib/bby127","title":"ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies","display_name":"ANPELA: analysis and performance assessment of the label-free quantification workflow for metaproteomic studies","publication_year":2018,"publication_date":"2018-12-07","ids":{"openalex":"https://openalex.org/W2910249797","doi":"https://doi.org/10.1093/bib/bby127","mag":"2910249797","pmid":"https://pubmed.ncbi.nlm.nih.gov/30649171"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bby127","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bby127","pdf_url":"https://academic.oup.com/bib/article-pdf/21/2/621/33399114/bby127.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/21/2/621/33399114/bby127.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101518929","display_name":"Jing Tang","orcid":"https://orcid.org/0000-0002-1491-6787"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Tang","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005927452","display_name":"Jianbo Fu","orcid":"https://orcid.org/0000-0003-3358-8106"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianbo Fu","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100658319","display_name":"Yunxia Wang","orcid":"https://orcid.org/0000-0003-1951-942X"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunxia Wang","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100374384","display_name":"Bo Li","orcid":"https://orcid.org/0000-0001-9944-0003"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Li","raw_affiliation_strings":["School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052672374","display_name":"Yinghong Li","orcid":"https://orcid.org/0000-0003-3629-519X"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yinghong Li","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044909162","display_name":"Qingxia Yang","orcid":"https://orcid.org/0000-0001-9607-7026"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingxia Yang","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110613625","display_name":"Xuejiao Cui","orcid":null},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuejiao Cui","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002772126","display_name":"Jiajun Hong","orcid":"https://orcid.org/0000-0002-2713-3917"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiajun Hong","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100347712","display_name":"Xiaofeng Li","orcid":"https://orcid.org/0000-0003-4307-7676"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofeng Li","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077700312","display_name":"Yu Chen","orcid":"https://orcid.org/0000-0002-5473-8022"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yuzong Chen","raw_affiliation_strings":["Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027345342","display_name":"Weiwei Xue","orcid":"https://orcid.org/0000-0002-3285-0574"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weiwei Xue","raw_affiliation_strings":["School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100755257","display_name":"Feng Zhu","orcid":"https://orcid.org/0000-0001-8069-0053"},"institutions":[{"id":"https://openalex.org/I158842170","display_name":"Chongqing University","ror":"https://ror.org/023rhb549","country_code":"CN","type":"education","lineage":["https://openalex.org/I158842170"]},{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Feng Zhu","raw_affiliation_strings":["College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China"],"raw_orcid":"https://orcid.org/0000-0001-8069-0053","affiliations":[{"raw_affiliation_string":"College of Pharmaceutical Sciences, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]},{"raw_affiliation_string":"School of Pharmaceutical Sciences and Collaborative Innovation Center for Brain Science, Chongqing University, Chongqing, China","institution_ids":["https://openalex.org/I158842170"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100755257"],"corresponding_institution_ids":["https://openalex.org/I158842170","https://openalex.org/I76130692"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":9.6653,"has_fulltext":false,"cited_by_count":168,"citation_normalized_percentile":{"value":0.99245621,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"21","issue":"2","first_page":"621","last_page":"636"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.989300012588501,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6413225531578064},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4858057498931885},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.08900997042655945}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6413225531578064},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4858057498931885},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.08900997042655945}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bby127","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bby127","pdf_url":"https://academic.oup.com/bib/article-pdf/21/2/621/33399114/bby127.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30649171","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30649171","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:7299298","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7299298","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bby127","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bby127","pdf_url":"https://academic.oup.com/bib/article-pdf/21/2/621/33399114/bby127.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1724776241","display_name":null,"funder_award_id":"2018YFC0910500","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G2446395889","display_name":null,"funder_award_id":"81872798","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":148,"referenced_works":["https://openalex.org/W1257453011","https://openalex.org/W1524762288","https://openalex.org/W1964267099","https://openalex.org/W1964328150","https://openalex.org/W1971887998","https://openalex.org/W1974845486","https://openalex.org/W1976394670","https://openalex.org/W1977271892","https://openalex.org/W1977812518","https://openalex.org/W1978077981","https://openalex.org/W1978542424","https://openalex.org/W1982148579","https://openalex.org/W1982499813","https://openalex.org/W1984903423","https://openalex.org/W1989532769","https://openalex.org/W1990299806","https://openalex.org/W2001321742","https://openalex.org/W2001703731","https://openalex.org/W2002264839","https://openalex.org/W2015556811","https://openalex.org/W2016636357","https://openalex.org/W2019196704","https://openalex.org/W2022873228","https://openalex.org/W2025701648","https://openalex.org/W2031653929","https://openalex.org/W2033047611","https://openalex.org/W2033173265","https://openalex.org/W2036491364","https://openalex.org/W2039380477","https://openalex.org/W2039521726","https://openalex.org/W2045117578","https://openalex.org/W2049499742","https://openalex.org/W2050758433","https://openalex.org/W2052047567","https://openalex.org/W2052388444","https://openalex.org/W2055256526","https://openalex.org/W2055325448","https://openalex.org/W2062859898","https://openalex.org/W2063546126","https://openalex.org/W2080752012","https://openalex.org/W2081697692","https://openalex.org/W2081781950","https://openalex.org/W2082376470","https://openalex.org/W2083253858","https://openalex.org/W2083637865","https://openalex.org/W2083847379","https://openalex.org/W2086894331","https://openalex.org/W2096863518","https://openalex.org/W2098900123","https://openalex.org/W2100000642","https://openalex.org/W2101847339","https://openalex.org/W2102170011","https://openalex.org/W2102307317","https://openalex.org/W2102471114","https://openalex.org/W2102521718","https://openalex.org/W2103165230","https://openalex.org/W2105851490","https://openalex.org/W2107700010","https://openalex.org/W2113416763","https://openalex.org/W2113662773","https://openalex.org/W2118993609","https://openalex.org/W2120246066","https://openalex.org/W2122383039","https://openalex.org/W2124911115","https://openalex.org/W2129587857","https://openalex.org/W2135078307","https://openalex.org/W2135581618","https://openalex.org/W2136505569","https://openalex.org/W2141091417","https://openalex.org/W2142205442","https://openalex.org/W2148702670","https://openalex.org/W2151619201","https://openalex.org/W2155752483","https://openalex.org/W2156391443","https://openalex.org/W2159375452","https://openalex.org/W2163328514","https://openalex.org/W2166876489","https://openalex.org/W2176188079","https://openalex.org/W2180723850","https://openalex.org/W2221358813","https://openalex.org/W2226446765","https://openalex.org/W2279768526","https://openalex.org/W2295190630","https://openalex.org/W2296416881","https://openalex.org/W2336392079","https://openalex.org/W2340665685","https://openalex.org/W2413753500","https://openalex.org/W2463195069","https://openalex.org/W2494736137","https://openalex.org/W2498136312","https://openalex.org/W2507722209","https://openalex.org/W2522005194","https://openalex.org/W2524808906","https://openalex.org/W2529750106","https://openalex.org/W2545189661","https://openalex.org/W2547623304","https://openalex.org/W2549871051","https://openalex.org/W2560391029","https://openalex.org/W2563720483","https://openalex.org/W2565482980","https://openalex.org/W2575885355","https://openalex.org/W2581896965","https://openalex.org/W2589227885","https://openalex.org/W2592244930","https://openalex.org/W2596895947","https://openalex.org/W2601935211","https://openalex.org/W2602236357","https://openalex.org/W2605255366","https://openalex.org/W2606953164","https://openalex.org/W2611281585","https://openalex.org/W2612407599","https://openalex.org/W2614935527","https://openalex.org/W2617446144","https://openalex.org/W2619796081","https://openalex.org/W2621142869","https://openalex.org/W2626078486","https://openalex.org/W2724833747","https://openalex.org/W2731014556","https://openalex.org/W2735061408","https://openalex.org/W2741879909","https://openalex.org/W2744921233","https://openalex.org/W2746035652","https://openalex.org/W2750786467","https://openalex.org/W2761602901","https://openalex.org/W2765961991","https://openalex.org/W2766826848","https://openalex.org/W2767039451","https://openalex.org/W2767405596","https://openalex.org/W2768511889","https://openalex.org/W2771485505","https://openalex.org/W2773610445","https://openalex.org/W2778609221","https://openalex.org/W2780398151","https://openalex.org/W2781342371","https://openalex.org/W2782593098","https://openalex.org/W2786640838","https://openalex.org/W2790234672","https://openalex.org/W2792571483","https://openalex.org/W2792790764","https://openalex.org/W2793629691","https://openalex.org/W2800627455","https://openalex.org/W2810968367","https://openalex.org/W2883427056","https://openalex.org/W2897452990","https://openalex.org/W2899433560","https://openalex.org/W2950557897","https://openalex.org/W6703015620","https://openalex.org/W6727679459"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W188202134"],"abstract_inverted_index":{"Label-free":[0],"quantification":[1,13,163],"(LFQ)":[2],"with":[3,45,131],"a":[4,30,54,76,105,146,212],"specific":[5,55,77],"and":[6,15,42,96,112,135,180,202,223,249],"sequentially":[7],"integrated":[8],"workflow":[9,57,124,222],"of":[10,33,37,53,93,100,121,140,158,172,219,227,236],"acquisition":[11],"technique,":[12],"tool":[14,117],"processing":[16,173],"method":[17],"has":[18,211,242],"emerged":[19],"as":[20,114,255],"the":[21,34,62,71,90,97,101,115,138,141,155,168,176,217,225,228,232],"popular":[22],"technique":[23],"employed":[24],"in":[25,191,247],"metaproteomic":[26,186,248],"research":[27],"to":[28,39,69,84,89,215],"provide":[29],"comprehensive":[31,147,233],"landscape":[32],"adaptive":[35],"response":[36],"microbes":[38],"external":[40],"stimuli":[41],"their":[43],"interactions":[44],"other":[46,250],"organisms":[47],"or":[48],"host":[49],"cells.":[50],"The":[51],"performance":[52,119,148,218,234],"LFQ":[56,123,143,205,221,253],"is":[58,67,82],"highly":[59],"dependent":[60],"on":[61],"studied":[63],"data.":[64],"Hence,":[65],"it":[66,81,136,241],"essential":[68],"discover":[70],"most":[72,169],"appropriate":[73],"one":[74],"for":[75,245],"data":[78,159],"set.":[79],"However,":[80],"challenging":[83],"perform":[85],"such":[86],"discovery":[87,226],"due":[88],"large":[91],"number":[92],"possible":[94],"workflows":[95],"multifaceted":[98],"nature":[99],"evaluation":[102],"criteria.":[103],"Herein,":[104],"web":[106,178],"server":[107],"ANPELA":[108,150,210],"(https://idrblab.org/anpela/)":[109],"was":[110],"developed":[111],"validated":[113],"first":[116],"enabling":[118,197],"assessment":[120,126,198],"whole":[122,220],"(collective":[125],"by":[127,145,161,231],"five":[128],"well-established":[129],"criteria":[130],"distinct":[132],"underlying":[133],"theories),":[134],"enabled":[137],"identification":[139],"optimal":[142,229],"workflow(s)":[144],"ranking.":[149],"not":[151],"only":[152],"automatically":[153],"detects":[154],"diverse":[156],"formats":[157],"generated":[160],"all":[162,237],"tools":[164],"but":[165],"also":[166],"provides":[167],"complete":[170],"set":[171],"methods":[174],"among":[175,260],"available":[177],"servers":[179],"stand-alone":[181],"tools.":[182],"Systematic":[183],"validation":[184],"using":[185,207],"benchmarks":[187],"revealed":[188],"ANPELA's":[189],"capabilities":[190],"1":[192],"discovering":[193],"well-performing":[194],"workflow(s),":[195],"(2)":[196],"from":[199],"multiple":[200],"perspectives":[201],"(3)":[203],"validating":[204],"accuracy":[206],"spiked":[208],"proteins.":[209],"unique":[213],"ability":[214],"evaluate":[216],"enables":[224],"LFQs":[230],"ranking":[235],"560":[238],"workflows.":[239],"Therefore,":[240],"great":[243],"potential":[244],"applications":[246],"studies":[251],"requiring":[252],"techniques,":[254],"many":[256],"features":[257],"are":[258],"shared":[259],"proteomic":[261],"studies.":[262]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":20},{"year":2023,"cited_by_count":24},{"year":2022,"cited_by_count":47},{"year":2021,"cited_by_count":24},{"year":2020,"cited_by_count":27},{"year":2019,"cited_by_count":23},{"year":2018,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
