{"id":"https://openalex.org/W2806965771","doi":"https://doi.org/10.1093/bib/bby039","title":"Regulatory variants: from detection to predicting impact","display_name":"Regulatory variants: from detection to predicting impact","publication_year":2018,"publication_date":"2018-05-09","ids":{"openalex":"https://openalex.org/W2806965771","doi":"https://doi.org/10.1093/bib/bby039","mag":"2806965771","pmid":"https://pubmed.ncbi.nlm.nih.gov/29893792"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bby039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bby039","pdf_url":"https://academic.oup.com/bib/article-pdf/20/5/1639/33616753/bby039.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/20/5/1639/33616753/bby039.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038281376","display_name":"Elena Rojano","orcid":"https://orcid.org/0000-0002-2678-710X"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Elena Rojano","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, University of Malaga (UMA), 29010 Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, University of Malaga (UMA), 29010 Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038138862","display_name":"Pedro Seoane","orcid":"https://orcid.org/0000-0002-3020-1415"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pedro Seoane","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, University of Malaga (UMA), 29010 Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, University of Malaga (UMA), 29010 Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065049632","display_name":"Juan A. G. Ranea","orcid":"https://orcid.org/0000-0003-0327-1837"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I2801357902","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886","country_code":"ES","type":"funder","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan A G Ranea","raw_affiliation_strings":["CIBER de Enfermedades Raras, ISCIII, Madrid, Spain and Department of Molecular Biology and Biochemistry, University of Malaga (UMA), 29010 Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"CIBER de Enfermedades Raras, ISCIII, Madrid, Spain and Department of Molecular Biology and Biochemistry, University of Malaga (UMA), 29010 Malaga, Spain","institution_ids":["https://openalex.org/I82767444","https://openalex.org/I4210115082","https://openalex.org/I2801357902"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032959797","display_name":"James R. Perkins","orcid":"https://orcid.org/0000-0003-4108-096X"},"institutions":[{"id":"https://openalex.org/I4210108548","display_name":"Hospital Regional Universitario de M\u00e1laga","ror":"https://ror.org/01mqsmm97","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210108548"]},{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"James R Perkins","raw_affiliation_strings":["Research laboratory, IBIMA-Regional University Hospital of Malaga, UMA, Malaga 29009, Spain"],"affiliations":[{"raw_affiliation_string":"Research laboratory, IBIMA-Regional University Hospital of Malaga, UMA, Malaga 29009, Spain","institution_ids":["https://openalex.org/I4210108548","https://openalex.org/I4210164724"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032959797"],"corresponding_institution_ids":["https://openalex.org/I4210108548","https://openalex.org/I4210164724"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":5.3816,"has_fulltext":false,"cited_by_count":121,"citation_normalized_percentile":{"value":0.96756825,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"20","issue":"5","first_page":"1639","last_page":"1654"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9851999878883362,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9847000241279602,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.515696108341217},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4054528772830963},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3299306035041809},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20595872402191162}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.515696108341217},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4054528772830963},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3299306035041809},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20595872402191162}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012045","descriptor_name":"Regulatory Sequences, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064112","descriptor_name":"Clustered Regularly Interspaced Short Palindromic Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064112","descriptor_name":"Clustered Regularly Interspaced Short Palindromic Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064112","descriptor_name":"Clustered Regularly Interspaced Short Palindromic Repeats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bby039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bby039","pdf_url":"https://academic.oup.com/bib/article-pdf/20/5/1639/33616753/bby039.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29893792","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29893792","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:5874730","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6917219","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:riuma.uma.es:10630/34462","is_oa":false,"landing_page_url":"https://hdl.handle.net/10630/34462","pdf_url":null,"source":{"id":"https://openalex.org/S4306401385","display_name":"Repositorio Institucional de la Universidad de M\u00e1laga (University of M\u00e1laga)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I82767444","host_organization_name":"Universidad de M\u00e1laga","host_organization_lineage":["https://openalex.org/I82767444"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"VoR"}],"best_oa_location":{"id":"doi:10.1093/bib/bby039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bby039","pdf_url":"https://academic.oup.com/bib/article-pdf/20/5/1639/33616753/bby039.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.5600000023841858}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334923","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320338080","display_name":"European Social Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2806965771.pdf","grobid_xml":"https://content.openalex.org/works/W2806965771.grobid-xml"},"referenced_works_count":170,"referenced_works":["https://openalex.org/W1484811165","https://openalex.org/W1488502645","https://openalex.org/W1491459594","https://openalex.org/W1596062789","https://openalex.org/W1890772623","https://openalex.org/W1968630368","https://openalex.org/W1968998985","https://openalex.org/W1974491774","https://openalex.org/W1974915314","https://openalex.org/W1979812340","https://openalex.org/W1980991473","https://openalex.org/W1983426138","https://openalex.org/W1984574291","https://openalex.org/W1984827465","https://openalex.org/W1986223165","https://openalex.org/W1989843455","https://openalex.org/W1989919392","https://openalex.org/W1991381389","https://openalex.org/W2000645162","https://openalex.org/W2001280003","https://openalex.org/W2005055386","https://openalex.org/W2006921756","https://openalex.org/W2008185869","https://openalex.org/W2009584074","https://openalex.org/W2009935171","https://openalex.org/W2010334283","https://openalex.org/W2011582941","https://openalex.org/W2015845481","https://openalex.org/W2016839209","https://openalex.org/W2018189081","https://openalex.org/W2018838463","https://openalex.org/W2027347575","https://openalex.org/W2028522556","https://openalex.org/W2036897871","https://openalex.org/W2039705224","https://openalex.org/W2043024569","https://openalex.org/W2045791858","https://openalex.org/W2049839274","https://openalex.org/W2058659458","https://openalex.org/W2062176149","https://openalex.org/W2063322714","https://openalex.org/W2066649243","https://openalex.org/W2069294792","https://openalex.org/W2076550209","https://openalex.org/W2076834372","https://openalex.org/W2078644058","https://openalex.org/W2081652229","https://openalex.org/W2084160423","https://openalex.org/W2102119022","https://openalex.org/W2102304447","https://openalex.org/W2102891551","https://openalex.org/W2102953633","https://openalex.org/W2103441770","https://openalex.org/W2104093114","https://openalex.org/W2104474654","https://openalex.org/W2104549677","https://openalex.org/W2104816742","https://openalex.org/W2105265620","https://openalex.org/W2106077937","https://openalex.org/W2108024825","https://openalex.org/W2108128563","https://openalex.org/W2108234281","https://openalex.org/W2108797218","https://openalex.org/W2110027059","https://openalex.org/W2113534011","https://openalex.org/W2117396697","https://openalex.org/W2119180969","https://openalex.org/W2122045212","https://openalex.org/W2123411711","https://openalex.org/W2124985265","https://openalex.org/W2125439972","https://openalex.org/W2126669746","https://openalex.org/W2131016694","https://openalex.org/W2131271579","https://openalex.org/W2132677579","https://openalex.org/W2133212095","https://openalex.org/W2137704220","https://openalex.org/W2139911862","https://openalex.org/W2141820415","https://openalex.org/W2142009304","https://openalex.org/W2142878546","https://openalex.org/W2142933606","https://openalex.org/W2143625465","https://openalex.org/W2146133016","https://openalex.org/W2146539504","https://openalex.org/W2148105023","https://openalex.org/W2148114118","https://openalex.org/W2149118429","https://openalex.org/W2149992227","https://openalex.org/W2153902319","https://openalex.org/W2157035703","https://openalex.org/W2159164310","https://openalex.org/W2160995259","https://openalex.org/W2161633633","https://openalex.org/W2161815151","https://openalex.org/W2162641630","https://openalex.org/W2162778212","https://openalex.org/W2163924952","https://openalex.org/W2166898290","https://openalex.org/W2168440186","https://openalex.org/W2169710039","https://openalex.org/W2170798594","https://openalex.org/W2172896922","https://openalex.org/W2174181728","https://openalex.org/W2174602966","https://openalex.org/W2176574121","https://openalex.org/W2195359644","https://openalex.org/W2195724570","https://openalex.org/W2198606573","https://openalex.org/W2209883607","https://openalex.org/W2212528563","https://openalex.org/W2215204057","https://openalex.org/W2221712684","https://openalex.org/W2225726427","https://openalex.org/W2257370818","https://openalex.org/W2259938310","https://openalex.org/W2265889397","https://openalex.org/W2277397278","https://openalex.org/W2285722270","https://openalex.org/W2313455548","https://openalex.org/W2320983896","https://openalex.org/W2337644665","https://openalex.org/W2344602241","https://openalex.org/W2396849069","https://openalex.org/W2415245143","https://openalex.org/W2515708257","https://openalex.org/W2515982329","https://openalex.org/W2517753256","https://openalex.org/W2519244818","https://openalex.org/W2534008312","https://openalex.org/W2556805640","https://openalex.org/W2557493613","https://openalex.org/W2560222628","https://openalex.org/W2566395839","https://openalex.org/W2583377988","https://openalex.org/W2584141685","https://openalex.org/W2584258834","https://openalex.org/W2590415818","https://openalex.org/W2593758470","https://openalex.org/W2595351638","https://openalex.org/W2596417560","https://openalex.org/W2597215890","https://openalex.org/W2598066557","https://openalex.org/W2608111319","https://openalex.org/W2615612969","https://openalex.org/W2738977477","https://openalex.org/W2739458618","https://openalex.org/W2746751314","https://openalex.org/W2751322905","https://openalex.org/W2751686252","https://openalex.org/W2761275051","https://openalex.org/W2765234380","https://openalex.org/W2770178180","https://openalex.org/W2771972353","https://openalex.org/W2783098129","https://openalex.org/W2786174959","https://openalex.org/W2788665925","https://openalex.org/W2949265370","https://openalex.org/W2952525902","https://openalex.org/W3167079816","https://openalex.org/W4210343616","https://openalex.org/W4230524569","https://openalex.org/W6635813232","https://openalex.org/W6647919042","https://openalex.org/W6659577852","https://openalex.org/W6676135520","https://openalex.org/W6688387473","https://openalex.org/W6694951301","https://openalex.org/W6731467534","https://openalex.org/W6745027111"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Variants":[0],"within":[1],"non-coding":[2,93,241],"genomic":[3,242],"regions":[4,243],"can":[5,23,40,105],"greatly":[6],"affect":[7],"disease.":[8],"In":[9],"recent":[10],"years,":[11],"increasing":[12],"focus":[13],"has":[14,48,164],"been":[15,49,166],"given":[16,247],"to":[17,55,141,174,236,253,256],"these":[18,110,143],"variants,":[19,207],"and":[20,34,69,71,88,119,131,148,151,171,210,219,231,249],"how":[21,258],"they":[22,259],"alter":[24],"regulatory":[25,43,62,188,206],"elements,":[26],"such":[27,223],"as":[28],"enhancers,":[29],"transcription":[30],"factor":[31],"binding":[32],"sites":[33],"DNA":[35],"methylation":[36],"regions.":[37],"Such":[38],"variants":[39,77,94,111,189,224,239],"be":[41,106],"considered":[42],"variants.":[44],"Concurrently,":[45],"much":[46],"effort":[47],"put":[50],"into":[51],"establishing":[52],"international":[53],"consortia":[54],"undertake":[56],"large":[57],"projects":[58],"aimed":[59,198],"at":[60,199],"discovering":[61,91],"elements":[63],"in":[64,168,202,213,240],"different":[65],"tissues,":[66],"cell":[67],"lines":[68],"organisms,":[70],"probing":[72],"the":[73,101,113,116,137,203,217,262],"effects":[74],"of":[75,121,139,187,205,222,229],"genetic":[76],"on":[78,129,179,261],"regulation":[79],"by":[80,145],"measuring":[81],"gene":[82],"expression.":[83],"Here,":[84],"we":[85],"describe":[86],"methods":[87],"techniques":[89,140],"for":[90,108],"disease-associated":[92],"using":[95,112],"sequencing":[96],"technologies.":[97],"We":[98,135,183],"then":[99],"explain":[100],"computational":[102],"procedures":[103],"that":[104],"used":[107,167],"annotating":[109],"information":[114],"from":[115,225],"aforementioned":[117],"projects,":[118],"prediction":[120],"their":[122],"putative":[123],"effects,":[124],"including":[125],"potential":[126,220],"pathogenicity,":[127],"based":[128],"rule-based":[130],"machine":[132],"learning":[133],"approaches.":[134],"provide":[136],"details":[138],"validate":[142],"predictions,":[144],"mapping":[146],"chromatin-chromatin":[147],"chromatin-protein":[149],"interactions,":[150],"introduce":[152],"Clustered":[153],"Regularly":[154],"Interspaced":[155],"Short":[156],"Palindromic":[157],"Repeats-Associated":[158],"Protein":[159],"9":[160],"(CRISPR-Cas9)":[161],"technology,":[162],"which":[163],"already":[165],"this":[169],"field":[170],"is":[172,197],"likely":[173],"have":[175],"a":[176,226,246],"big":[177],"impact":[178,260],"its":[180],"future":[181],"evolution.":[182],"also":[184],"give":[185],"examples":[186],"associated":[190,244],"with":[191,245],"multiple":[192],"complex":[193],"diseases.":[194],"This":[195],"review":[196],"bioinformaticians":[200],"interested":[201,212],"characterization":[204],"molecular":[208],"biologists":[209],"geneticists":[211],"understanding":[214],"more":[215],"about":[216,238],"nature":[218],"role":[221],"functional":[227],"point":[228],"views,":[230],"clinicians":[232],"who":[233],"may":[234],"wish":[235],"learn":[237],"disease":[248],"find":[250],"out":[251],"what":[252],"do":[254],"next":[255],"uncover":[257],"underlying":[263],"mechanisms.":[264]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":22},{"year":2021,"cited_by_count":25},{"year":2020,"cited_by_count":20},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
