{"id":"https://openalex.org/W2768422310","doi":"https://doi.org/10.1093/bib/bbx158","title":"Computer-aided biomarker discovery for precision medicine: data resources, models and applications","display_name":"Computer-aided biomarker discovery for precision medicine: data resources, models and applications","publication_year":2017,"publication_date":"2017-10-28","ids":{"openalex":"https://openalex.org/W2768422310","doi":"https://doi.org/10.1093/bib/bbx158","mag":"2768422310","pmid":"https://pubmed.ncbi.nlm.nih.gov/29194464"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbx158","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbx158","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002365671","display_name":"Yuxin Lin","orcid":"https://orcid.org/0000-0001-6543-0317"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxin Lin","raw_affiliation_strings":["Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070813228","display_name":"Fuliang Qian","orcid":"https://orcid.org/0000-0002-1253-7951"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fuliang Qian","raw_affiliation_strings":["Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100737670","display_name":"Li Shen","orcid":"https://orcid.org/0000-0002-9789-9360"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Shen","raw_affiliation_strings":["Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100404373","display_name":"Feifei Chen","orcid":"https://orcid.org/0000-0002-7251-1956"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feifei Chen","raw_affiliation_strings":["Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I3923682"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004301767","display_name":"Jiajia Chen","orcid":"https://orcid.org/0000-0003-2545-2639"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiajia Chen","raw_affiliation_strings":["School of Chemistry, Biology and Material Engineering, Suzhou University of Science and Technology, China"],"affiliations":[{"raw_affiliation_string":"School of Chemistry, Biology and Material Engineering, Suzhou University of Science and Technology, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081095213","display_name":"Bairong Shen","orcid":"https://orcid.org/0000-0003-2899-1531"},"institutions":[{"id":"https://openalex.org/I3923682","display_name":"Soochow University","ror":"https://ror.org/05t8y2r12","country_code":"CN","type":"education","lineage":["https://openalex.org/I3923682"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bairong Shen","raw_affiliation_strings":["Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Center for Systems Biology, Soochow University, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I3923682"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5081095213"],"corresponding_institution_ids":["https://openalex.org/I3923682"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":2.5747,"has_fulltext":false,"cited_by_count":87,"citation_normalized_percentile":{"value":0.90513652,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"20","issue":"3","first_page":"952","last_page":"975"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.8291424512863159},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.717484176158905},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.6242935657501221},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6236034035682678},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5446391701698303},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4728032946586609},{"id":"https://openalex.org/keywords/flourishing","display_name":"Flourishing","score":0.4431770145893097},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.43271735310554504},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4230373501777649},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3650445342063904},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34886282682418823},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3478752076625824},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.21284446120262146},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18209731578826904},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.1406915783882141},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.09277084469795227}],"concepts":[{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.8291424512863159},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.717484176158905},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.6242935657501221},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6236034035682678},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5446391701698303},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4728032946586609},{"id":"https://openalex.org/C2781017355","wikidata":"https://www.wikidata.org/wiki/Q5462027","display_name":"Flourishing","level":2,"score":0.4431770145893097},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.43271735310554504},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4230373501777649},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3650445342063904},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34886282682418823},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3478752076625824},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.21284446120262146},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18209731578826904},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.1406915783882141},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.09277084469795227},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbx158","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbx158","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29194464","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29194464","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1468104968","display_name":null,"funder_award_id":"31670851","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4865473572","display_name":null,"funder_award_id":"31470821","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6987374417","display_name":null,"funder_award_id":"31400712","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7349633688","display_name":null,"funder_award_id":"91530320","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":149,"referenced_works":["https://openalex.org/W91108901","https://openalex.org/W320145043","https://openalex.org/W1578537223","https://openalex.org/W1804307181","https://openalex.org/W1849667859","https://openalex.org/W1889158580","https://openalex.org/W1892363833","https://openalex.org/W1923482230","https://openalex.org/W1940319397","https://openalex.org/W1947520875","https://openalex.org/W1956783319","https://openalex.org/W1966327575","https://openalex.org/W1973234126","https://openalex.org/W1977236339","https://openalex.org/W1980541833","https://openalex.org/W1988263223","https://openalex.org/W1990933893","https://openalex.org/W2006292671","https://openalex.org/W2008978345","https://openalex.org/W2009935171","https://openalex.org/W2020418945","https://openalex.org/W2020541351","https://openalex.org/W2030897807","https://openalex.org/W2032242566","https://openalex.org/W2033253437","https://openalex.org/W2035975685","https://openalex.org/W2036369755","https://openalex.org/W2042843450","https://openalex.org/W2044498526","https://openalex.org/W2048270152","https://openalex.org/W2058514643","https://openalex.org/W2072814794","https://openalex.org/W2080878119","https://openalex.org/W2082704080","https://openalex.org/W2082983027","https://openalex.org/W2083927153","https://openalex.org/W2084709428","https://openalex.org/W2087387762","https://openalex.org/W2089350319","https://openalex.org/W2090096246","https://openalex.org/W2096326357","https://openalex.org/W2096435311","https://openalex.org/W2098412979","https://openalex.org/W2103970959","https://openalex.org/W2105136962","https://openalex.org/W2108000084","https://openalex.org/W2113834377","https://openalex.org/W2114298461","https://openalex.org/W2115965944","https://openalex.org/W2117529508","https://openalex.org/W2117977572","https://openalex.org/W2118088736","https://openalex.org/W2119412782","https://openalex.org/W2119782683","https://openalex.org/W2119927557","https://openalex.org/W2120070589","https://openalex.org/W2122680090","https://openalex.org/W2122863289","https://openalex.org/W2123183032","https://openalex.org/W2124045889","https://openalex.org/W2124153471","https://openalex.org/W2124632458","https://openalex.org/W2128227526","https://openalex.org/W2128768066","https://openalex.org/W2128983843","https://openalex.org/W2129158737","https://openalex.org/W2129447411","https://openalex.org/W2129556256","https://openalex.org/W2130656587","https://openalex.org/W2130884900","https://openalex.org/W2132940486","https://openalex.org/W2133259578","https://openalex.org/W2133658633","https://openalex.org/W2138147014","https://openalex.org/W2138832911","https://openalex.org/W2140077863","https://openalex.org/W2141849512","https://openalex.org/W2143662314","https://openalex.org/W2145361279","https://openalex.org/W2146573461","https://openalex.org/W2151052080","https://openalex.org/W2154722286","https://openalex.org/W2154947819","https://openalex.org/W2158135353","https://openalex.org/W2162143298","https://openalex.org/W2166959941","https://openalex.org/W2167179525","https://openalex.org/W2170951627","https://openalex.org/W2173409620","https://openalex.org/W2174483798","https://openalex.org/W2174734928","https://openalex.org/W2180669271","https://openalex.org/W2204741763","https://openalex.org/W2223740898","https://openalex.org/W2227395130","https://openalex.org/W2233413639","https://openalex.org/W2237668363","https://openalex.org/W2238290008","https://openalex.org/W2263348188","https://openalex.org/W2270927656","https://openalex.org/W2280882096","https://openalex.org/W2298824325","https://openalex.org/W2300370021","https://openalex.org/W2301536592","https://openalex.org/W2329659234","https://openalex.org/W2336166162","https://openalex.org/W2342405165","https://openalex.org/W2418417957","https://openalex.org/W2502770791","https://openalex.org/W2508622936","https://openalex.org/W2514679615","https://openalex.org/W2533442061","https://openalex.org/W2533446135","https://openalex.org/W2537623931","https://openalex.org/W2547384263","https://openalex.org/W2549653752","https://openalex.org/W2557976825","https://openalex.org/W2559322763","https://openalex.org/W2559588208","https://openalex.org/W2563770120","https://openalex.org/W2564116841","https://openalex.org/W2565888045","https://openalex.org/W2567437666","https://openalex.org/W2583911935","https://openalex.org/W2590153856","https://openalex.org/W2591484772","https://openalex.org/W2592506264","https://openalex.org/W2592890838","https://openalex.org/W2594831275","https://openalex.org/W2596198811","https://openalex.org/W2600564204","https://openalex.org/W2602123787","https://openalex.org/W2602355001","https://openalex.org/W2602657459","https://openalex.org/W2603186043","https://openalex.org/W2604889034","https://openalex.org/W2605961237","https://openalex.org/W2610303631","https://openalex.org/W2617715606","https://openalex.org/W2738332719","https://openalex.org/W2748570664","https://openalex.org/W2750852689","https://openalex.org/W2754158726","https://openalex.org/W2915108429","https://openalex.org/W2963627083","https://openalex.org/W6640380249","https://openalex.org/W6678953929","https://openalex.org/W6717142295","https://openalex.org/W6727263047"],"related_works":["https://openalex.org/W2218259209","https://openalex.org/W96119380","https://openalex.org/W3023706879","https://openalex.org/W2096326357","https://openalex.org/W2108949684","https://openalex.org/W2012655824","https://openalex.org/W1965976436","https://openalex.org/W2326771431","https://openalex.org/W3177170977","https://openalex.org/W2883070899"],"abstract_inverted_index":{"Biomarkers":[0],"are":[1,88,138,160,172],"a":[2,44,96,182],"class":[3],"of":[4,32,50,66,74,125,143,205],"measurable":[5],"and":[6,16,70,116,123,157,168,179,203,212,222],"evaluable":[7],"indicators":[8],"with":[9,82,152],"the":[10,25,29,48,56,63,72,121,141,201,216],"potential":[11],"to":[12,20,27,91,102,109,196,213],"predict":[13],"disease":[14,93,113],"initiation":[15],"progression.":[17],"In":[18,53,118],"contrast":[19],"disease-associated":[21],"factors,":[22],"biomarkers":[23,104],"hold":[24],"promise":[26],"capture":[28],"changeable":[30],"signatures":[31],"biological":[33,68],"states.":[34],"With":[35],"methodological":[36],"advances,":[37],"computer-aided":[38],"biomarker":[39,79,127,155,191,210],"discovery":[40],"has":[41,60],"now":[42],"become":[43],"burgeoning":[45],"paradigm":[46],"in":[47],"field":[49],"biomedical":[51],"science.":[52],"recent":[54],"years,":[55],"'big":[57],"data'":[58],"term":[59],"accumulated":[61],"for":[62,77,112,189,209],"systematical":[64],"investigation":[65],"complex":[67],"phenomena":[69],"promoted":[71],"flourishing":[73],"computational":[75,207],"methods":[76],"systems-level":[78],"screening.":[80],"Compared":[81],"routine":[83],"wet-lab":[84],"experiments,":[85],"bioinformatics":[86,184],"approaches":[87,208],"more":[89],"efficient":[90],"decode":[92],"pathogenesis":[94],"under":[95],"holistic":[97],"framework,":[98],"which":[99],"is":[100,186],"propitious":[101],"identify":[103],"ranging":[105],"from":[106],"single":[107,130],"molecules":[108],"molecular":[110,131],"networks":[111],"diagnosis,":[114],"prognosis":[115],"therapy.":[117],"this":[119],"review,":[120],"concept":[122],"characteristics":[124],"typical":[126],"types,":[128],"e.g.":[129],"biomarkers,":[132,134,136],"module/network":[133],"cross-level":[135],"etc.,":[137],"explicated":[139],"on":[140,176],"guidance":[142],"systems":[144],"biology.":[145],"Then,":[146],"publicly":[147],"available":[148],"data":[149],"resources":[150],"together":[151],"some":[153],"well-constructed":[154],"databases":[156],"knowledge":[158],"bases":[159],"introduced.":[161],"Biomarker":[162],"identification":[163],"models":[164],"using":[165],"mathematical,":[166],"network":[167,177],"machine":[169],"learning":[170],"theories":[171],"sequentially":[173],"discussed.":[174],"Based":[175],"substructural":[178],"functional":[180],"evidences,":[181],"novel":[183],"model":[185],"particularly":[187],"highlighted":[188],"microRNA":[190],"discovery.":[192],"This":[193],"article":[194],"aims":[195],"give":[197],"deep":[198],"insights":[199],"into":[200],"advantages":[202],"challenges":[204],"current":[206],"detection,":[211],"light":[214],"up":[215],"future":[217],"wisdom":[218],"toward":[219],"precision":[220],"medicine":[221],"nation-wide":[223],"healthcare.":[224]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6}],"updated_date":"2026-03-28T08:17:26.163206","created_date":"2025-10-10T00:00:00"}
