{"id":"https://openalex.org/W2778160167","doi":"https://doi.org/10.1093/bib/bbx143","title":"Bioinformatics for precision oncology","display_name":"Bioinformatics for precision oncology","publication_year":2017,"publication_date":"2017-12-07","ids":{"openalex":"https://openalex.org/W2778160167","doi":"https://doi.org/10.1093/bib/bbx143","mag":"2778160167","pmid":"https://pubmed.ncbi.nlm.nih.gov/29272324"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbx143","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbx143","pdf_url":"https://academic.oup.com/bib/article-pdf/20/3/778/28847264/bbx143.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/20/3/778/28847264/bbx143.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054504245","display_name":"Jochen Singer","orcid":"https://orcid.org/0000-0003-0001-8625"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Jochen Singer","raw_affiliation_strings":["Department of Biosystems Science and Engineering of ETH Zurich in Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biosystems Science and Engineering of ETH Zurich in Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066422713","display_name":"Anja Irmisch","orcid":"https://orcid.org/0000-0001-9820-1844"},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]},{"id":"https://openalex.org/I4210100468","display_name":"University Hospital of Zurich","ror":"https://ror.org/01462r250","country_code":"CH","type":"funder","lineage":["https://openalex.org/I4210100468"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Anja Irmisch","raw_affiliation_strings":["Department of Dermatology at the University of Zurich Hospital in Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Dermatology at the University of Zurich Hospital in Zurich, Switzerland","institution_ids":["https://openalex.org/I4210100468","https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006162777","display_name":"Hans\u2010Joachim Ruscheweyh","orcid":"https://orcid.org/0000-0001-7473-6086"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Hans-Joachim Ruscheweyh","raw_affiliation_strings":["Department of Biosystems Science and Engineering of ETH Zurich in Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biosystems Science and Engineering of ETH Zurich in Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005041697","display_name":"Franziska Singer","orcid":"https://orcid.org/0000-0002-6017-1595"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Franziska Singer","raw_affiliation_strings":["ETH Zurich in Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"ETH Zurich in Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078378799","display_name":"Nora C. Toussaint","orcid":"https://orcid.org/0000-0001-7911-7647"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Nora C Toussaint","raw_affiliation_strings":["ETH Zurich in Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"ETH Zurich in Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031480514","display_name":"Mitchell P. Levesque","orcid":"https://orcid.org/0000-0001-5902-9420"},"institutions":[{"id":"https://openalex.org/I4210100468","display_name":"University Hospital of Zurich","ror":"https://ror.org/01462r250","country_code":"CH","type":"funder","lineage":["https://openalex.org/I4210100468"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Mitchell P Levesque","raw_affiliation_strings":["University of Zurich Hospital in Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"University of Zurich Hospital in Zurich, Switzerland","institution_ids":["https://openalex.org/I4210100468","https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085494082","display_name":"Daniel J. Stekhoven","orcid":"https://orcid.org/0000-0003-3163-3161"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Daniel J Stekhoven","raw_affiliation_strings":["ETH Zurich in Zurich, Switzerland"],"affiliations":[{"raw_affiliation_string":"ETH Zurich in Zurich, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035497488","display_name":"Niko Beerenwinkel","orcid":"https://orcid.org/0000-0002-0573-6119"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Niko Beerenwinkel","raw_affiliation_strings":["Department of Biosystems Science and Engineering of ETH Zurich in Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biosystems Science and Engineering of ETH Zurich in Basel, Switzerland","institution_ids":["https://openalex.org/I35440088"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5035497488"],"corresponding_institution_ids":["https://openalex.org/I35440088"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.4252,"has_fulltext":false,"cited_by_count":75,"citation_normalized_percentile":{"value":0.79984983,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"20","issue":"3","first_page":"778","last_page":"788"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8113038539886475},{"id":"https://openalex.org/keywords/prognostics","display_name":"Prognostics","score":0.6904746890068054},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.616223156452179},{"id":"https://openalex.org/keywords/precision-oncology","display_name":"Precision oncology","score":0.6025990843772888},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.5642103552818298},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.48059794306755066},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.4747736155986786},{"id":"https://openalex.org/keywords/radiation-oncology","display_name":"Radiation oncology","score":0.45722830295562744},{"id":"https://openalex.org/keywords/clinical-trial","display_name":"Clinical trial","score":0.44066762924194336},{"id":"https://openalex.org/keywords/molecular-oncology","display_name":"Molecular oncology","score":0.43526801466941833},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.4316387176513672},{"id":"https://openalex.org/keywords/clinical-oncology","display_name":"Clinical Oncology","score":0.4211830496788025},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.41801419854164124},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41320011019706726},{"id":"https://openalex.org/keywords/medical-physics","display_name":"Medical physics","score":0.3554195761680603},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.35469454526901245},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3271653354167938},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.20871567726135254},{"id":"https://openalex.org/keywords/radiation-therapy","display_name":"Radiation therapy","score":0.19991761445999146},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.1850053369998932},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.16417503356933594},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15455836057662964},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.12432786822319031}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8113038539886475},{"id":"https://openalex.org/C129364497","wikidata":"https://www.wikidata.org/wiki/Q3042561","display_name":"Prognostics","level":2,"score":0.6904746890068054},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.616223156452179},{"id":"https://openalex.org/C3020497934","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision oncology","level":3,"score":0.6025990843772888},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.5642103552818298},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.48059794306755066},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.4747736155986786},{"id":"https://openalex.org/C2992520072","wikidata":"https://www.wikidata.org/wiki/Q180507","display_name":"Radiation oncology","level":3,"score":0.45722830295562744},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.44066762924194336},{"id":"https://openalex.org/C2777362581","wikidata":"https://www.wikidata.org/wiki/Q10881532","display_name":"Molecular oncology","level":4,"score":0.43526801466941833},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.4316387176513672},{"id":"https://openalex.org/C2776598537","wikidata":"https://www.wikidata.org/wiki/Q1812651","display_name":"Clinical Oncology","level":3,"score":0.4211830496788025},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.41801419854164124},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41320011019706726},{"id":"https://openalex.org/C19527891","wikidata":"https://www.wikidata.org/wiki/Q1120908","display_name":"Medical physics","level":1,"score":0.3554195761680603},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.35469454526901245},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3271653354167938},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.20871567726135254},{"id":"https://openalex.org/C509974204","wikidata":"https://www.wikidata.org/wiki/Q180507","display_name":"Radiation therapy","level":2,"score":0.19991761445999146},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1850053369998932},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.16417503356933594},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15455836057662964},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.12432786822319031},{"id":"https://openalex.org/C29537977","wikidata":"https://www.wikidata.org/wiki/Q188941","display_name":"Cell cycle","level":3,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008495","descriptor_name":"Medical Oncology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbx143","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbx143","pdf_url":"https://academic.oup.com/bib/article-pdf/20/3/778/28847264/bbx143.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29272324","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29272324","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/235394","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/235394","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics, 20 (3)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:6585151","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6585151","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"doi:10.3929/ethz-b-000235394","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000235394","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1093/bib/bbx143","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbx143","pdf_url":"https://academic.oup.com/bib/article-pdf/20/3/778/28847264/bbx143.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5699999928474426,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[{"id":"https://openalex.org/G6199569106","display_name":null,"funder_award_id":"633974","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"}],"funders":[{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2778160167.pdf","grobid_xml":"https://content.openalex.org/works/W2778160167.grobid-xml"},"referenced_works_count":120,"referenced_works":["https://openalex.org/W1544712555","https://openalex.org/W1578830280","https://openalex.org/W1740929737","https://openalex.org/W1791160312","https://openalex.org/W1846586690","https://openalex.org/W1871496359","https://openalex.org/W1919257374","https://openalex.org/W1926851645","https://openalex.org/W1967940883","https://openalex.org/W1983426138","https://openalex.org/W1984068087","https://openalex.org/W2012151892","https://openalex.org/W2018838463","https://openalex.org/W2025884426","https://openalex.org/W2036509237","https://openalex.org/W2036897871","https://openalex.org/W2041993682","https://openalex.org/W2044433401","https://openalex.org/W2063280109","https://openalex.org/W2076647600","https://openalex.org/W2080660780","https://openalex.org/W2082426444","https://openalex.org/W2083289048","https://openalex.org/W2087588809","https://openalex.org/W2089213295","https://openalex.org/W2089335658","https://openalex.org/W2089708180","https://openalex.org/W2094122486","https://openalex.org/W2096460732","https://openalex.org/W2097438318","https://openalex.org/W2098746581","https://openalex.org/W2099377894","https://openalex.org/W2101412130","https://openalex.org/W2103441770","https://openalex.org/W2104816742","https://openalex.org/W2104885590","https://openalex.org/W2106410630","https://openalex.org/W2106578986","https://openalex.org/W2108234281","https://openalex.org/W2109218597","https://openalex.org/W2110417468","https://openalex.org/W2110430166","https://openalex.org/W2111350087","https://openalex.org/W2114104545","https://openalex.org/W2118151336","https://openalex.org/W2119180969","https://openalex.org/W2121413434","https://openalex.org/W2122732537","https://openalex.org/W2122959041","https://openalex.org/W2123507520","https://openalex.org/W2127250774","https://openalex.org/W2128542677","https://openalex.org/W2129415103","https://openalex.org/W2130116522","https://openalex.org/W2131039280","https://openalex.org/W2131271579","https://openalex.org/W2133339454","https://openalex.org/W2134526812","https://openalex.org/W2136482257","https://openalex.org/W2138207763","https://openalex.org/W2138601221","https://openalex.org/W2140729960","https://openalex.org/W2146005104","https://openalex.org/W2146290346","https://openalex.org/W2149441684","https://openalex.org/W2150056019","https://openalex.org/W2150575159","https://openalex.org/W2152061559","https://openalex.org/W2154139219","https://openalex.org/W2154397429","https://openalex.org/W2154866190","https://openalex.org/W2155943701","https://openalex.org/W2163082258","https://openalex.org/W2165293958","https://openalex.org/W2168133698","https://openalex.org/W2168440186","https://openalex.org/W2169353806","https://openalex.org/W2169456326","https://openalex.org/W2170551349","https://openalex.org/W2170855681","https://openalex.org/W2177763304","https://openalex.org/W2179438025","https://openalex.org/W2192272998","https://openalex.org/W2195304377","https://openalex.org/W2202954603","https://openalex.org/W2248907500","https://openalex.org/W2256016639","https://openalex.org/W2263137078","https://openalex.org/W2269040222","https://openalex.org/W2304422002","https://openalex.org/W2345879537","https://openalex.org/W2419528132","https://openalex.org/W2477057044","https://openalex.org/W2503515884","https://openalex.org/W2513047692","https://openalex.org/W2517179206","https://openalex.org/W2528483409","https://openalex.org/W2553830626","https://openalex.org/W2557397534","https://openalex.org/W2559034752","https://openalex.org/W2564365886","https://openalex.org/W2566723262","https://openalex.org/W2567652848","https://openalex.org/W2573450018","https://openalex.org/W2583911935","https://openalex.org/W2587992857","https://openalex.org/W2591662301","https://openalex.org/W2591733518","https://openalex.org/W2601380465","https://openalex.org/W2601520864","https://openalex.org/W2603352569","https://openalex.org/W2605897695","https://openalex.org/W2607211817","https://openalex.org/W2614443510","https://openalex.org/W2748728020","https://openalex.org/W2899401372","https://openalex.org/W4210702584","https://openalex.org/W4239818044","https://openalex.org/W4255085073","https://openalex.org/W6743097901"],"related_works":["https://openalex.org/W2082652567","https://openalex.org/W4230391164","https://openalex.org/W2064864216","https://openalex.org/W2901592949","https://openalex.org/W1955136089","https://openalex.org/W2342728964","https://openalex.org/W4246115338","https://openalex.org/W2799557439","https://openalex.org/W4311222817","https://openalex.org/W4400619084"],"abstract_inverted_index":{"Molecular":[0],"profiling":[1,117],"of":[2,21,29,41,64,74,97,114,123,184],"tumor":[3,100,151,177],"biopsies":[4],"plays":[5],"an":[6],"increasingly":[7],"important":[8],"role":[9],"not":[10],"only":[11],"in":[12,17,71,142,149],"cancer":[13,22,155],"research,":[14],"but":[15],"also":[16],"the":[18,27,61,72,84,95,103,111,120,176,182],"clinical":[19,75,125,132,144,185],"management":[20],"patients.":[23],"Multi-omics":[24],"approaches":[25],"hold":[26],"promise":[28,40],"improving":[30],"diagnostics,":[31],"prognostics":[32],"and":[33,50,53,67,83,90,102,127,157,164],"personalized":[34],"treatment.":[35],"To":[36],"deliver":[37],"on":[38],"this":[39],"precision":[42],"oncology,":[43,76],"appropriate":[44],"bioinformatics":[45,65,105],"methods":[46,66],"for":[47,86],"managing,":[48],"integrating":[49],"analyzing":[51],"large":[52],"complex":[54],"data":[55,118],"are":[56],"necessary.":[57],"Here,":[58],"we":[59],"discuss":[60],"specific":[62,104],"requirements":[63],"software":[68,188],"that":[69,107],"arise":[70],"setting":[73],"owing":[77],"to":[78,119,130,137,168,189],"a":[79,98,124],"stricter":[80],"regulatory":[81],"environment":[82],"need":[85],"rapid,":[87],"highly":[88],"reproducible":[89],"robust":[91],"procedures.":[92],"We":[93,161],"describe":[94],"workflow":[96],"molecular":[99,116,150,191],"board":[101],"support":[106,187],"it":[108],"requires,":[109],"from":[110],"primary":[112],"analysis":[113],"raw":[115],"automatic":[121],"generation":[122],"report":[126],"its":[128],"delivery":[129],"decision-making":[131],"oncologists.":[133],"Such":[134],"workflows":[135],"have":[136],"various":[138],"degrees":[139],"been":[140],"implemented":[141],"many":[143],"trials,":[145],"as":[146,148,179,181],"well":[147,180],"boards":[152],"at":[153],"specialized":[154],"centers":[156],"university":[158],"hospitals":[159],"worldwide.":[160],"review":[162],"these":[163],"more":[165],"recent":[166],"efforts":[167],"include":[169],"other":[170],"high-dimensional":[171],"multi-omics":[172],"patient":[173],"profiles":[174],"into":[175,193],"board,":[178],"state":[183],"decision":[186],"translate":[190],"findings":[192],"treatment":[194],"recommendations.":[195]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":19},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
