{"id":"https://openalex.org/W2606847111","doi":"https://doi.org/10.1093/bib/bbx036","title":"Dynamic modeling and network approaches for omics time course data: overview of computational approaches and applications","display_name":"Dynamic modeling and network approaches for omics time course data: overview of computational approaches and applications","publication_year":2017,"publication_date":"2017-03-10","ids":{"openalex":"https://openalex.org/W2606847111","doi":"https://doi.org/10.1093/bib/bbx036","mag":"2606847111","pmid":"https://pubmed.ncbi.nlm.nih.gov/28430854"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbx036","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbx036","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103234460","display_name":"Yulan Liang","orcid":"https://orcid.org/0000-0001-6792-488X"},"institutions":[{"id":"https://openalex.org/I126744593","display_name":"University of Maryland, Baltimore","ror":"https://ror.org/04rq5mt64","country_code":"US","type":"education","lineage":["https://openalex.org/I126744593"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yulan Liang","raw_affiliation_strings":["Department of Family and Community Health, University of Maryland, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Department of Family and Community Health, University of Maryland, Baltimore, MD, USA","institution_ids":["https://openalex.org/I126744593"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018951068","display_name":"Arpad Kelemen","orcid":"https://orcid.org/0000-0001-7181-4413"},"institutions":[{"id":"https://openalex.org/I126744593","display_name":"University of Maryland, Baltimore","ror":"https://ror.org/04rq5mt64","country_code":"US","type":"education","lineage":["https://openalex.org/I126744593"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arpad Kelemen","raw_affiliation_strings":["Department of Family and Community Health, University of Maryland, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Department of Family and Community Health, University of Maryland, Baltimore, MD, USA","institution_ids":["https://openalex.org/I126744593"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5103234460"],"corresponding_institution_ids":["https://openalex.org/I126744593"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":1.6791,"has_fulltext":false,"cited_by_count":39,"citation_normalized_percentile":{"value":0.83970296,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"19","issue":"5","first_page":"1051","last_page":"1068"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6958432793617249},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.6880855560302734},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.6538293957710266},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.6443523168563843},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5140336751937866},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.4954477548599243},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.42225125432014465},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.41187068819999695},{"id":"https://openalex.org/keywords/systems-medicine","display_name":"Systems medicine","score":0.411274790763855},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4110836386680603},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2952551245689392},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22584301233291626},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1851201355457306}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6958432793617249},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.6880855560302734},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.6538293957710266},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.6443523168563843},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5140336751937866},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.4954477548599243},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.42225125432014465},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.41187068819999695},{"id":"https://openalex.org/C36415437","wikidata":"https://www.wikidata.org/wiki/Q7663871","display_name":"Systems medicine","level":3,"score":0.411274790763855},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4110836386680603},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2952551245689392},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22584301233291626},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1851201355457306},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074021","descriptor_name":"Interatrial Block","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074021","descriptor_name":"Interatrial Block","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000074021","descriptor_name":"Interatrial Block","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbx036","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbx036","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28430854","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28430854","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":153,"referenced_works":["https://openalex.org/W21197300","https://openalex.org/W51833465","https://openalex.org/W605677922","https://openalex.org/W816410171","https://openalex.org/W1577165969","https://openalex.org/W1654197422","https://openalex.org/W1658877244","https://openalex.org/W1756428283","https://openalex.org/W1768527575","https://openalex.org/W1839682376","https://openalex.org/W1963522244","https://openalex.org/W1964735403","https://openalex.org/W1967024673","https://openalex.org/W1969289662","https://openalex.org/W1973632067","https://openalex.org/W1978420707","https://openalex.org/W1987178827","https://openalex.org/W1994458586","https://openalex.org/W1998767819","https://openalex.org/W2002810210","https://openalex.org/W2003003919","https://openalex.org/W2003713758","https://openalex.org/W2004396999","https://openalex.org/W2008014943","https://openalex.org/W2012733121","https://openalex.org/W2013221974","https://openalex.org/W2020154367","https://openalex.org/W2023120194","https://openalex.org/W2023292217","https://openalex.org/W2023348596","https://openalex.org/W2028240222","https://openalex.org/W2029485495","https://openalex.org/W2037893131","https://openalex.org/W2047204673","https://openalex.org/W2049058758","https://openalex.org/W2051676319","https://openalex.org/W2052131982","https://openalex.org/W2053465831","https://openalex.org/W2053609837","https://openalex.org/W2054035764","https://openalex.org/W2056875635","https://openalex.org/W2057074436","https://openalex.org/W2058942402","https://openalex.org/W2059140245","https://openalex.org/W2060977279","https://openalex.org/W2061840149","https://openalex.org/W2062029454","https://openalex.org/W2062533676","https://openalex.org/W2065219357","https://openalex.org/W2070415280","https://openalex.org/W2070516257","https://openalex.org/W2073384202","https://openalex.org/W2073954414","https://openalex.org/W2074089196","https://openalex.org/W2076593601","https://openalex.org/W2078279629","https://openalex.org/W2080187616","https://openalex.org/W2081781433","https://openalex.org/W2082385833","https://openalex.org/W2086935182","https://openalex.org/W2089682313","https://openalex.org/W2091452373","https://openalex.org/W2095898968","https://openalex.org/W2096018935","https://openalex.org/W2098823293","https://openalex.org/W2100270478","https://openalex.org/W2101420429","https://openalex.org/W2101502746","https://openalex.org/W2102305597","https://openalex.org/W2103454055","https://openalex.org/W2103916454","https://openalex.org/W2104724027","https://openalex.org/W2105432836","https://openalex.org/W2106362845","https://openalex.org/W2108256858","https://openalex.org/W2109127150","https://openalex.org/W2109384743","https://openalex.org/W2109619915","https://openalex.org/W2110297764","https://openalex.org/W2111104903","https://openalex.org/W2113654344","https://openalex.org/W2114071920","https://openalex.org/W2115428292","https://openalex.org/W2117446654","https://openalex.org/W2117949454","https://openalex.org/W2119043225","https://openalex.org/W2120890012","https://openalex.org/W2123403527","https://openalex.org/W2124007391","https://openalex.org/W2124199927","https://openalex.org/W2125310307","https://openalex.org/W2125631472","https://openalex.org/W2125904845","https://openalex.org/W2125905177","https://openalex.org/W2127788692","https://openalex.org/W2129169687","https://openalex.org/W2134092975","https://openalex.org/W2135187880","https://openalex.org/W2135849804","https://openalex.org/W2136988691","https://openalex.org/W2137203368","https://openalex.org/W2141025089","https://openalex.org/W2142107342","https://openalex.org/W2142501768","https://openalex.org/W2142720308","https://openalex.org/W2143076232","https://openalex.org/W2144227498","https://openalex.org/W2144738674","https://openalex.org/W2146506956","https://openalex.org/W2147566730","https://openalex.org/W2148473923","https://openalex.org/W2150318080","https://openalex.org/W2151098983","https://openalex.org/W2151768167","https://openalex.org/W2153467314","https://openalex.org/W2154601808","https://openalex.org/W2156426710","https://openalex.org/W2157989234","https://openalex.org/W2158217645","https://openalex.org/W2159675211","https://openalex.org/W2161511352","https://openalex.org/W2162459693","https://openalex.org/W2163296727","https://openalex.org/W2163856173","https://openalex.org/W2165685453","https://openalex.org/W2167190345","https://openalex.org/W2167194270","https://openalex.org/W2167602547","https://openalex.org/W2169766923","https://openalex.org/W2171599819","https://openalex.org/W2204452945","https://openalex.org/W2274694171","https://openalex.org/W2283650087","https://openalex.org/W2299922160","https://openalex.org/W2301501567","https://openalex.org/W2307495662","https://openalex.org/W2311221011","https://openalex.org/W2336169222","https://openalex.org/W2339855950","https://openalex.org/W2436216983","https://openalex.org/W2471934570","https://openalex.org/W2512216892","https://openalex.org/W2611370172","https://openalex.org/W3102222172","https://openalex.org/W3104281729","https://openalex.org/W4242024146","https://openalex.org/W4388319965","https://openalex.org/W6634305704","https://openalex.org/W6642696194","https://openalex.org/W6663569582","https://openalex.org/W6671645444","https://openalex.org/W6679228494","https://openalex.org/W6858214765"],"related_works":["https://openalex.org/W2155492529","https://openalex.org/W4252504573","https://openalex.org/W4385510321","https://openalex.org/W15348386","https://openalex.org/W2314128295","https://openalex.org/W2892290702","https://openalex.org/W2170019229","https://openalex.org/W2891930115","https://openalex.org/W2606847111","https://openalex.org/W2201464266"],"abstract_inverted_index":{"Inferring":[0],"networks":[1],"and":[2,8,20,25,40,46,50,80,83,113,120,144,152,159,168,175,192,201,211],"dynamics":[3],"of":[4,35,55,59,97,146,149],"genes,":[5],"proteins,":[6],"cells":[7],"other":[9,202],"biological":[10,14,110,164],"entities":[11],"from":[12,179],"high-throughput":[13],"omics":[15,157],"data":[16,173],"is":[17,29,65],"a":[18,63,66],"central":[19],"challenging":[21],"issue":[22],"in":[23,62,213],"computational":[24,82,182],"systems":[26],"biology.":[27],"This":[28],"essential":[30],"for":[31,42,68,133,155,204],"understanding":[32],"the":[33,56,116,205],"complexity":[34],"human":[36],"health,":[37],"disease":[38,91,169],"susceptibility":[39],"pathogenesis":[41],"Predictive,":[43],"Preventive,":[44],"Personalized":[45],"Participatory":[47],"(P4)":[48],"system":[49],"precision":[51],"medicine.":[52],"The":[53,194],"delineation":[54],"possible":[57],"interactions":[58],"all":[60],"genes/proteins":[61],"genome/proteome":[64],"task":[67],"which":[69,123],"conventional":[70],"experimental":[71],"techniques":[72],"are":[73,78,186,208],"ill":[74],"suited.":[75],"Urgently":[76],"needed":[77],"rapid":[79],"inexpensive":[81],"statistical":[84,184],"methods":[85,185,207],"that":[86,99],"can":[87,100],"identify":[88],"interacting":[89],"candidate":[90],"genes":[92],"or":[93,104],"drug":[94],"targets":[95],"out":[96],"thousands":[98],"be":[101,126,130],"further":[102],"investigated":[103],"validated":[105],"by":[106],"experimentations.":[107],"Moreover,":[108,171],"identifying":[109],"dynamic":[111,150],"systems,":[112,165],"simultaneously":[114],"estimating":[115],"important":[117,131],"kinetic":[118],"structural":[119],"functional":[121],"parameters,":[122],"may":[124],"not":[125],"experimentally":[127],"accessible":[128],"could":[129],"directions":[132],"drug-disease-gene":[134],"network":[135,153],"studies.":[136],"In":[137],"this":[138],"article,":[139],"we":[140],"present":[141],"an":[142],"overview":[143],"comparison":[145],"recent":[147,196],"developments":[148],"modeling":[151],"approaches":[154],"time-course":[156],"data,":[158],"their":[160,189],"applications":[161],"to":[162,181,183],"various":[163,172],"health":[166],"conditions":[167],"statuses.":[170],"reduction":[174],"analytical":[176],"schemes":[177],"ranging":[178],"mathematical":[180],"compared":[187,206],"including":[188],"merits,":[190],"drawbacks":[191],"limitations.":[193],"most":[195],"software,":[197],"associated":[198],"web":[199],"resources":[200],"potentials":[203],"also":[209],"presented":[210],"discussed":[212],"detail.":[214]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":3}],"updated_date":"2026-03-28T08:17:26.163206","created_date":"2025-10-10T00:00:00"}
