{"id":"https://openalex.org/W2513880868","doi":"https://doi.org/10.1093/bib/bbw071","title":"A protein network descriptor server and its use in studying protein, disease, metabolic and drug targeted networks","display_name":"A protein network descriptor server and its use in studying protein, disease, metabolic and drug targeted networks","publication_year":2016,"publication_date":"2016-08-19","ids":{"openalex":"https://openalex.org/W2513880868","doi":"https://doi.org/10.1093/bib/bbw071","mag":"2513880868","pmid":"https://pubmed.ncbi.nlm.nih.gov/27542402"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbw071","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbw071","pdf_url":"https://academic.oup.com/bib/article-pdf/18/6/1057/25603430/bbw071.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/18/6/1057/25603430/bbw071.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100364153","display_name":"Peng Zhang","orcid":"https://orcid.org/0000-0002-6129-567X"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I37574244","display_name":"Sichuan Agricultural University","ror":"https://ror.org/0388c3403","country_code":"CN","type":"education","lineage":["https://openalex.org/I37574244"]}],"countries":["CN","SG"],"is_corresponding":false,"raw_author_name":"Peng Zhang","raw_affiliation_strings":["College of Science, Sichuan Agricultural University, Yaan, P. R. China","Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Science, Sichuan Agricultural University, Yaan, P. R. China","institution_ids":["https://openalex.org/I37574244"]},{"raw_affiliation_string":"Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061697130","display_name":"Lin Tao","orcid":"https://orcid.org/0000-0001-7494-4758"},"institutions":[{"id":"https://openalex.org/I37574244","display_name":"Sichuan Agricultural University","ror":"https://ror.org/0388c3403","country_code":"CN","type":"education","lineage":["https://openalex.org/I37574244"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Tao","raw_affiliation_strings":["College of Science, Sichuan Agricultural University, Yaan, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Science, Sichuan Agricultural University, Yaan, P. R. China","institution_ids":["https://openalex.org/I37574244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061507364","display_name":"Xian Zeng","orcid":"https://orcid.org/0000-0002-1397-554X"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Xian Zeng","raw_affiliation_strings":["Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017826971","display_name":"Qin Chu","orcid":"https://orcid.org/0000-0002-2434-0611"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chu Qin","raw_affiliation_strings":["Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020114794","display_name":"Shangying Chen","orcid":"https://orcid.org/0000-0003-3036-0798"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Shangying Chen","raw_affiliation_strings":["Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100755257","display_name":"Feng Zhu","orcid":"https://orcid.org/0000-0001-8069-0053"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Zhu","raw_affiliation_strings":["College of Chemistry, Sichuan University, Chengdu, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Chemistry, Sichuan University, Chengdu, P. R. China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026549253","display_name":"Zerong Li","orcid":"https://orcid.org/0000-0003-1712-7158"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4391768003","display_name":"State Key Laboratory of Biotherapy","ror":"https://ror.org/00x43yy22","country_code":null,"type":"facility","lineage":["https://openalex.org/I24185976","https://openalex.org/I4391768003"]},{"id":"https://openalex.org/I74837319","display_name":"Jiangxi Agricultural University","ror":"https://ror.org/00dc7s858","country_code":"CN","type":"education","lineage":["https://openalex.org/I74837319"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zerong Li","raw_affiliation_strings":["Molecular Medicine Research Center, State Key Laboratory of Biotherapy, West China Hospital, West China School of Medicine, Sichuan University, Chengdu, P. R. China","Key Lab of Agricultural Products Processing and Quality Control of Nanchang City, Jiangxi Agricultural University, Nanchang, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Molecular Medicine Research Center, State Key Laboratory of Biotherapy, West China Hospital, West China School of Medicine, Sichuan University, Chengdu, P. R. China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4391768003"]},{"raw_affiliation_string":"Key Lab of Agricultural Products Processing and Quality Control of Nanchang City, Jiangxi Agricultural University, Nanchang, P. R. China","institution_ids":["https://openalex.org/I74837319"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111707517","display_name":"Yuyang Jiang","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Yuyang Jiang","raw_affiliation_strings":["The Ministry-Province Jointly Constructed Base for State Key Lab, Shenzhen Technology and Engineering Lab for Personalized Cancer Diagnostics and Therapeutics, and Shenzhen Kivita Innovative Drug Discovery Institute, Tsinghua University Shenzhen Graduate School, Shenzhen, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Ministry-Province Jointly Constructed Base for State Key Lab, Shenzhen Technology and Engineering Lab for Personalized Cancer Diagnostics and Therapeutics, and Shenzhen Kivita Innovative Drug Discovery Institute, Tsinghua University Shenzhen Graduate School, Shenzhen, P.R. China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100652326","display_name":"Weiping Chen","orcid":"https://orcid.org/0000-0002-0459-0605"},"institutions":[{"id":"https://openalex.org/I74837319","display_name":"Jiangxi Agricultural University","ror":"https://ror.org/00dc7s858","country_code":"CN","type":"education","lineage":["https://openalex.org/I74837319"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Weiping Chen","raw_affiliation_strings":["Key Lab of Agricultural Products Processing and Quality Control of Nanchang City, Jiangxi Agricultural University, Nanchang, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Lab of Agricultural Products Processing and Quality Control of Nanchang City, Jiangxi Agricultural University, Nanchang, P. R. China","institution_ids":["https://openalex.org/I74837319"]}]},{"author_position":"last","author":{"id":null,"display_name":"Yu-Zong Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Yu-Zong Chen","raw_affiliation_strings":["Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Drug Design Group, Department of Pharmacy, National University of Singapore, Singapore","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5100652326","https://openalex.org/A5111707517"],"corresponding_institution_ids":["https://openalex.org/I165932596","https://openalex.org/I74837319"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":5.7674,"has_fulltext":true,"cited_by_count":52,"citation_normalized_percentile":{"value":0.96248641,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"18","issue":"6","first_page":"bbw071","last_page":"bbw071"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.7214655876159668},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.605906069278717},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5830925107002258},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5583963394165039},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5079212784767151},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.4434528350830078},{"id":"https://openalex.org/keywords/enhanced-data-rates-for-gsm-evolution","display_name":"Enhanced Data Rates for GSM Evolution","score":0.43859755992889404},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.416363000869751},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3824835419654846},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33219701051712036},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.27290117740631104},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.25842761993408203},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.24305859208106995},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19387668371200562},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15420043468475342},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12748077511787415},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08627855777740479}],"concepts":[{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.7214655876159668},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.605906069278717},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5830925107002258},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5583963394165039},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5079212784767151},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.4434528350830078},{"id":"https://openalex.org/C162307627","wikidata":"https://www.wikidata.org/wiki/Q204833","display_name":"Enhanced Data Rates for GSM Evolution","level":2,"score":0.43859755992889404},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.416363000869751},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3824835419654846},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33219701051712036},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.27290117740631104},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.25842761993408203},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.24305859208106995},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19387668371200562},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15420043468475342},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12748077511787415},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08627855777740479},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbw071","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbw071","pdf_url":"https://academic.oup.com/bib/article-pdf/18/6/1057/25603430/bbw071.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27542402","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27542402","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:5072891","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5862332","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbw071","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbw071","pdf_url":"https://academic.oup.com/bib/article-pdf/18/6/1057/25603430/bbw071.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2030905204","display_name":null,"funder_award_id":"81325021","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4341659953","display_name":null,"funder_award_id":"CQDXWL-2012-Z003","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G520719582","display_name":null,"funder_award_id":"CDJZR14-46-88-01","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G7268608698","display_name":null,"funder_award_id":"2013CB967204","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7688524232","display_name":null,"funder_award_id":"81202459","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2513880868.pdf","grobid_xml":"https://content.openalex.org/works/W2513880868.grobid-xml"},"referenced_works_count":115,"referenced_works":["https://openalex.org/W106879616","https://openalex.org/W118100147","https://openalex.org/W229097380","https://openalex.org/W595642978","https://openalex.org/W1485881041","https://openalex.org/W1490161904","https://openalex.org/W1520184440","https://openalex.org/W1544009106","https://openalex.org/W1965302838","https://openalex.org/W1967570846","https://openalex.org/W1969909621","https://openalex.org/W1971425971","https://openalex.org/W1971937094","https://openalex.org/W1973743008","https://openalex.org/W1974944535","https://openalex.org/W1977176813","https://openalex.org/W1984828008","https://openalex.org/W1985241583","https://openalex.org/W1989978129","https://openalex.org/W1994803330","https://openalex.org/W2000417339","https://openalex.org/W2002653466","https://openalex.org/W2004824191","https://openalex.org/W2010768245","https://openalex.org/W2014517538","https://openalex.org/W2015266772","https://openalex.org/W2018045523","https://openalex.org/W2032968787","https://openalex.org/W2033591223","https://openalex.org/W2035914845","https://openalex.org/W2039378089","https://openalex.org/W2043570667","https://openalex.org/W2043764521","https://openalex.org/W2044514479","https://openalex.org/W2046594601","https://openalex.org/W2047693963","https://openalex.org/W2049827003","https://openalex.org/W2051427941","https://openalex.org/W2057498577","https://openalex.org/W2059008558","https://openalex.org/W2059883798","https://openalex.org/W2060464767","https://openalex.org/W2060705109","https://openalex.org/W2062533676","https://openalex.org/W2066447707","https://openalex.org/W2070704205","https://openalex.org/W2074370114","https://openalex.org/W2082340690","https://openalex.org/W2083045667","https://openalex.org/W2085968965","https://openalex.org/W2090386832","https://openalex.org/W2090496852","https://openalex.org/W2091613287","https://openalex.org/W2095387858","https://openalex.org/W2095403534","https://openalex.org/W2096173332","https://openalex.org/W2097289205","https://openalex.org/W2099551325","https://openalex.org/W2100463963","https://openalex.org/W2101181377","https://openalex.org/W2101315310","https://openalex.org/W2104376129","https://openalex.org/W2105666627","https://openalex.org/W2105713372","https://openalex.org/W2109278577","https://openalex.org/W2112090702","https://openalex.org/W2113951828","https://openalex.org/W2119114096","https://openalex.org/W2120607558","https://openalex.org/W2120850582","https://openalex.org/W2120920194","https://openalex.org/W2122863289","https://openalex.org/W2122880567","https://openalex.org/W2125910575","https://openalex.org/W2129620576","https://openalex.org/W2131848047","https://openalex.org/W2132022337","https://openalex.org/W2134672568","https://openalex.org/W2141297641","https://openalex.org/W2143893259","https://openalex.org/W2145465608","https://openalex.org/W2147814423","https://openalex.org/W2149055390","https://openalex.org/W2150318080","https://openalex.org/W2152800101","https://openalex.org/W2154897810","https://openalex.org/W2155019453","https://openalex.org/W2156721528","https://openalex.org/W2156737316","https://openalex.org/W2157825442","https://openalex.org/W2159440599","https://openalex.org/W2159675211","https://openalex.org/W2159911786","https://openalex.org/W2163480486","https://openalex.org/W2164298117","https://openalex.org/W2165198854","https://openalex.org/W2166468869","https://openalex.org/W2167592961","https://openalex.org/W2167822639","https://openalex.org/W2169528473","https://openalex.org/W2170682402","https://openalex.org/W2171599819","https://openalex.org/W2171707538","https://openalex.org/W2186179725","https://openalex.org/W2260075228","https://openalex.org/W2263739890","https://openalex.org/W2322675392","https://openalex.org/W2326091185","https://openalex.org/W2739999456","https://openalex.org/W3098217834","https://openalex.org/W4246087521","https://openalex.org/W4249920046","https://openalex.org/W4299823775","https://openalex.org/W6676698813","https://openalex.org/W6686802963"],"related_works":["https://openalex.org/W2480711475","https://openalex.org/W2061997414","https://openalex.org/W1587522533","https://openalex.org/W1996411829","https://openalex.org/W1984523482","https://openalex.org/W2121182182","https://openalex.org/W2791017844","https://openalex.org/W2092688629","https://openalex.org/W2044905153","https://openalex.org/W2561730314"],"abstract_inverted_index":{"The":[0,134],"genetic,":[1],"proteomic,":[2],"disease":[3,14,26,64],"and":[4,16,27,38,98,107,125,128,157],"pharmacological":[5],"studies":[6,32],"have":[7,52],"generated":[8],"rich":[9],"data":[10],"in":[11,49,76,89,148],"protein":[12],"interaction,":[13],"regulation":[15],"drug":[17,28],"activities":[18],"useful":[19,73],"for":[20,57,93],"systems-level":[21],"study":[22],"of":[23,71,101,136,164],"the":[24,36,39,45,59,77,95,137,150],"biological,":[25],"therapeutic":[29],"processes.":[30],"These":[31],"are":[33],"facilitated":[34],"by":[35,144],"established":[37],"emerging":[40],"computational":[41],"methods.":[42],"More":[43],"recently,":[44],"network":[46,74,87,140],"descriptors":[47,88,141],"developed":[48],"other":[50],"disciplines":[51],"become":[53],"more":[54],"increasingly":[55],"used":[56],"studying":[58,149],"protein-protein,":[60,151],"gene":[61,152,154],"regulation,":[62],"metabolic,":[63],"networks.":[65,133,159],"There":[66],"is":[67,142,161],"an":[68],"inadequate":[69],"coverage":[70],"these":[72],"features":[75],"public":[78],"web":[79,91],"servers.":[80],"We":[81],"therefore":[82],"introduced":[83],"upto":[84],"313":[85],"literature-reported":[86,146],"PROFEAT":[90,138,160],"server,":[92],"describing":[94],"topological,":[96],"connectivity":[97],"complexity":[99],"characteristics":[100],"undirected":[102,110,115,120],"unweighted":[103,130],"(uniform":[104],"binding":[105,113,123],"constants":[106,124],"molecular":[108,118,126],"levels),":[109,119],"edge-weighted":[111],"(varying":[112,117,122],"constants),":[114],"node-weighted":[116],"edge-node-weighted":[121],"levels)":[127],"directed":[129],"(oriented":[131],"process)":[132],"usefulness":[135],"computed":[139],"illustrated":[143],"their":[145],"applications":[147],"regulatory,":[153],"co-expression,":[155],"protein-drug":[156],"metabolic":[158],"accessible":[162],"free":[163],"charge":[165],"at":[166],"http://bidd2.nus.edu.sg/cgi-bin/profeat2016/main.cgi.":[167]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":3}],"updated_date":"2026-05-23T08:51:43.019350","created_date":"2025-10-10T00:00:00"}
