{"id":"https://openalex.org/W2336865608","doi":"https://doi.org/10.1093/bib/bbw032","title":"Development of a cloud-based Bioinformatics Training Platform","display_name":"Development of a cloud-based Bioinformatics Training Platform","publication_year":2016,"publication_date":"2016-04-15","ids":{"openalex":"https://openalex.org/W2336865608","doi":"https://doi.org/10.1093/bib/bbw032","mag":"2336865608","pmid":"https://pubmed.ncbi.nlm.nih.gov/27084333"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbw032","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbw032","pdf_url":"https://academic.oup.com/bib/article-pdf/18/3/537/25408954/bbw032.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/18/3/537/25408954/bbw032.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059942694","display_name":"Jerico Revote","orcid":"https://orcid.org/0000-0002-0381-3600"},"institutions":[{"id":"https://openalex.org/I4210138205","display_name":"Bioplatforms Australia","ror":"https://ror.org/042gz1a70","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I4210138205"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jerico Revote","raw_affiliation_strings":["Bioplatforms Australia, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Bioplatforms Australia, Sydney, Australia","institution_ids":["https://openalex.org/I4210138205"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088788062","display_name":"Nathan S. Watson\u2010Haigh","orcid":"https://orcid.org/0000-0002-7935-6151"},"institutions":[{"id":"https://openalex.org/I4210138205","display_name":"Bioplatforms Australia","ror":"https://ror.org/042gz1a70","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I4210138205"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Nathan S. Watson-Haigh","raw_affiliation_strings":["Bioplatforms Australia, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Bioplatforms Australia, Sydney, Australia","institution_ids":["https://openalex.org/I4210138205"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032598087","display_name":"Steve Quenette","orcid":"https://orcid.org/0000-0002-0368-7341"},"institutions":[{"id":"https://openalex.org/I4210138205","display_name":"Bioplatforms Australia","ror":"https://ror.org/042gz1a70","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I4210138205"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Steve Quenette","raw_affiliation_strings":["Bioplatforms Australia, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Bioplatforms Australia, Sydney, Australia","institution_ids":["https://openalex.org/I4210138205"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007952068","display_name":"Blair Bethwaite","orcid":null},"institutions":[{"id":"https://openalex.org/I4210138205","display_name":"Bioplatforms Australia","ror":"https://ror.org/042gz1a70","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I4210138205"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Blair Bethwaite","raw_affiliation_strings":["Bioplatforms Australia, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Bioplatforms Australia, Sydney, Australia","institution_ids":["https://openalex.org/I4210138205"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043315317","display_name":"Annette McGrath","orcid":"https://orcid.org/0000-0002-1765-7039"},"institutions":[{"id":"https://openalex.org/I4210138205","display_name":"Bioplatforms Australia","ror":"https://ror.org/042gz1a70","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I4210138205"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Annette McGrath","raw_affiliation_strings":["Bioplatforms Australia, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Bioplatforms Australia, Sydney, Australia","institution_ids":["https://openalex.org/I4210138205"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091517487","display_name":"Catherine A. Shang","orcid":"https://orcid.org/0000-0002-5116-4668"},"institutions":[{"id":"https://openalex.org/I4210138205","display_name":"Bioplatforms Australia","ror":"https://ror.org/042gz1a70","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I4210138205"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Catherine A. Shang","raw_affiliation_strings":["Bioplatforms Australia, Sydney, Australia"],"affiliations":[{"raw_affiliation_string":"Bioplatforms Australia, Sydney, Australia","institution_ids":["https://openalex.org/I4210138205"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5091517487"],"corresponding_institution_ids":["https://openalex.org/I4210138205"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.6962,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.73731519,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"18","issue":"3","first_page":"bbw032","last_page":"bbw032"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.853035569190979},{"id":"https://openalex.org/keywords/training","display_name":"Training (meteorology)","score":0.6826016306877136},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.601865291595459},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5834024548530579},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.5134454965591431},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.47795963287353516},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.35637664794921875},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34085771441459656},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3248494267463684},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12356528639793396},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11021694540977478},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.07026222348213196},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.06894102692604065},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.05131104588508606}],"concepts":[{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.853035569190979},{"id":"https://openalex.org/C2777211547","wikidata":"https://www.wikidata.org/wiki/Q17141490","display_name":"Training (meteorology)","level":2,"score":0.6826016306877136},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.601865291595459},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5834024548530579},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.5134454965591431},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.47795963287353516},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.35637664794921875},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34085771441459656},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3248494267463684},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12356528639793396},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11021694540977478},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.07026222348213196},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.06894102692604065},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.05131104588508606},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C153294291","wikidata":"https://www.wikidata.org/wiki/Q25261","display_name":"Meteorology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001315","descriptor_name":"Australia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014495","descriptor_name":"Universities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014495","descriptor_name":"Universities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014495","descriptor_name":"Universities","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbw032","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbw032","pdf_url":"https://academic.oup.com/bib/article-pdf/18/3/537/25408954/bbw032.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27084333","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27084333","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:digital.library.adelaide.edu.au:2440/98797","is_oa":true,"landing_page_url":"http://hdl.handle.net/2440/98797","pdf_url":null,"source":{"id":"https://openalex.org/S4306401835","display_name":"Adelaide Research & Scholarship (AR&S) (University of Adelaide)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5681781","host_organization_name":"The University of Adelaide","host_organization_lineage":["https://openalex.org/I5681781"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dx.doi.org/10.1093/bib/bbw032","raw_type":"Journal article"},{"id":"pmh:oai:europepmc.org:4283568","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5429016","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbw032","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbw032","pdf_url":"https://academic.oup.com/bib/article-pdf/18/3/537/25408954/bbw032.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.6299999952316284}],"awards":[],"funders":[{"id":"https://openalex.org/F4320316785","display_name":"VMware","ror":null},{"id":"https://openalex.org/F4320320386","display_name":"Commonwealth Scientific and Industrial Research Organisation","ror":"https://ror.org/03qn8fb07"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2336865608.pdf","grobid_xml":"https://content.openalex.org/works/W2336865608.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W2097288488","https://openalex.org/W2109401902","https://openalex.org/W2136482257","https://openalex.org/W2308864345"],"related_works":["https://openalex.org/W4244478748","https://openalex.org/W4223488648","https://openalex.org/W230091440","https://openalex.org/W2134969820","https://openalex.org/W2251605416","https://openalex.org/W4389340727","https://openalex.org/W4205786897","https://openalex.org/W3150465815","https://openalex.org/W2802581102","https://openalex.org/W2494640179"],"abstract_inverted_index":{"The":[0,23,46,99],"Bioinformatics":[1],"Training":[2],"Platform":[3],"(BTP)":[4],"has":[5,91],"been":[6,92,113],"developed":[7],"to":[8,11,16,39,50,59,115],"provide":[9,51],"access":[10],"the":[12,76,87,89,126],"computational":[13],"infrastructure":[14],"required":[15],"deliver":[17],"sophisticated":[18],"hands-on":[19],"bioinformatics":[20,72,78],"training":[21,38,73,79,110],"courses.":[22],"BTP":[24,47,100],"is":[25,30,101],"a":[26,68],"cloud-based":[27],"solution":[28],"that":[29],"in":[31],"active":[32],"use":[33],"for":[34,71],"delivering":[35,60],"next-generation":[36],"sequencing":[37],"Australian":[40],"researchers":[41],"at":[42,62,119],"geographically":[43],"dispersed":[44],"locations.":[45],"was":[48],"built":[49],"an":[52,102],"easy,":[53],"accessible,":[54],"consistent":[55],"and":[56,65,104],"cost-effective":[57],"approach":[58],"workshops":[61,111],"host":[63],"universities":[64],"organizations":[66],"with":[67,95],"high":[69],"demand":[70],"but":[74],"lacking":[75],"dedicated":[77],"suites":[80],"required.":[81],"To":[82,107],"support":[83],"broad":[84],"uptake":[85],"of":[86],"BTP,":[88],"platform":[90],"made":[93],"compatible":[94],"multiple":[96],"cloud":[97],"infrastructures.":[98],"open-source":[103],"open-access":[105],"resource.":[106],"date,":[108],"20":[109],"have":[112],"delivered":[114],"over":[116,120],"700":[117],"trainees":[118],"10":[121],"venues":[122],"across":[123],"Australia":[124],"using":[125],"BTP.":[127]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
