{"id":"https://openalex.org/W2283435117","doi":"https://doi.org/10.1093/bib/bbv059","title":"Computational analysis of protein interaction networks for infectious diseases","display_name":"Computational analysis of protein interaction networks for infectious diseases","publication_year":2015,"publication_date":"2015-08-10","ids":{"openalex":"https://openalex.org/W2283435117","doi":"https://doi.org/10.1093/bib/bbv059","mag":"2283435117","pmid":"https://pubmed.ncbi.nlm.nih.gov/26261187"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbv059","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbv059","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012287683","display_name":"Archana Pan","orcid":"https://orcid.org/0000-0002-3568-7047"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Archana Pan","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059498160","display_name":"Chandrajit Lahiri","orcid":"https://orcid.org/0000-0002-9783-7741"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chandrajit Lahiri","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004073228","display_name":"Anjana Rajendiran","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anjana Rajendiran","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5039064405","display_name":"Buvaneswari Shanmugham","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Buvaneswari Shanmugham","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3885,"currency":"USD","value_usd":3885},"apc_paid":null,"fwci":2.0814,"has_fulltext":false,"cited_by_count":50,"citation_normalized_percentile":{"value":0.87484142,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"17","issue":"3","first_page":"517","last_page":"526"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biomedicine","display_name":"Biomedicine","score":0.6969967484474182},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5161069631576538},{"id":"https://openalex.org/keywords/modularity","display_name":"Modularity (biology)","score":0.5066724419593811},{"id":"https://openalex.org/keywords/interaction-network","display_name":"Interaction network","score":0.49008476734161377},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4403052031993866},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3868985176086426},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3843819200992584},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3248816132545471},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2831125855445862},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08069565892219543}],"concepts":[{"id":"https://openalex.org/C66782513","wikidata":"https://www.wikidata.org/wiki/Q864601","display_name":"Biomedicine","level":2,"score":0.6969967484474182},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5161069631576538},{"id":"https://openalex.org/C2779478453","wikidata":"https://www.wikidata.org/wiki/Q6889748","display_name":"Modularity (biology)","level":2,"score":0.5066724419593811},{"id":"https://openalex.org/C55105296","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interaction network","level":3,"score":0.49008476734161377},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4403052031993866},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3868985176086426},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3843819200992584},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3248816132545471},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2831125855445862},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08069565892219543},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbv059","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbv059","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26261187","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26261187","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:eprints.sunway.edu.my:903","is_oa":false,"landing_page_url":"http://eprints.sunway.edu.my/903/1/Chandrajit%20Computational%20analysis%20of%20protein%20interaction%20Pre-Print.pdf","pdf_url":"http://eprints.sunway.edu.my/903/1/Chandrajit%20Computational%20analysis%20of%20protein%20interaction%20Pre-Print.pdf","source":{"id":"https://openalex.org/S4306400337","display_name":"Sunway Institutional Repository (Sunway University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I84339108","host_organization_name":"Sunway University","host_organization_lineage":["https://openalex.org/I84339108"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:europepmc.org:6068332","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7110031","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:bib:17/3/517","is_oa":false,"landing_page_url":"http://bib.oxfordjournals.org/cgi/content/short/17/3/517","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.6700000166893005}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":112,"referenced_works":["https://openalex.org/W108107911","https://openalex.org/W606701410","https://openalex.org/W1486817521","https://openalex.org/W1759780789","https://openalex.org/W1783384641","https://openalex.org/W1964109037","https://openalex.org/W1965202162","https://openalex.org/W1965410913","https://openalex.org/W1966421023","https://openalex.org/W1968574388","https://openalex.org/W1970913835","https://openalex.org/W1973762522","https://openalex.org/W1978372651","https://openalex.org/W1980922062","https://openalex.org/W1985213868","https://openalex.org/W1986708244","https://openalex.org/W1989991095","https://openalex.org/W1990593099","https://openalex.org/W1995117714","https://openalex.org/W1999154602","https://openalex.org/W2001699795","https://openalex.org/W2008317118","https://openalex.org/W2008553530","https://openalex.org/W2008867268","https://openalex.org/W2009884897","https://openalex.org/W2012852001","https://openalex.org/W2013502943","https://openalex.org/W2015086187","https://openalex.org/W2019822789","https://openalex.org/W2030675030","https://openalex.org/W2031950455","https://openalex.org/W2032243072","https://openalex.org/W2037036397","https://openalex.org/W2040411864","https://openalex.org/W2040941311","https://openalex.org/W2042210880","https://openalex.org/W2046163764","https://openalex.org/W2048299923","https://openalex.org/W2051230054","https://openalex.org/W2054111091","https://openalex.org/W2056148391","https://openalex.org/W2057328278","https://openalex.org/W2063616585","https://openalex.org/W2065304353","https://openalex.org/W2065769502","https://openalex.org/W2072780819","https://openalex.org/W2074443723","https://openalex.org/W2077997913","https://openalex.org/W2082199132","https://openalex.org/W2083978969","https://openalex.org/W2088062845","https://openalex.org/W2088422296","https://openalex.org/W2090148127","https://openalex.org/W2090766471","https://openalex.org/W2095867585","https://openalex.org/W2099147305","https://openalex.org/W2100699132","https://openalex.org/W2101998831","https://openalex.org/W2105924489","https://openalex.org/W2106278308","https://openalex.org/W2107055030","https://openalex.org/W2107340752","https://openalex.org/W2108166665","https://openalex.org/W2109174354","https://openalex.org/W2109715166","https://openalex.org/W2110211303","https://openalex.org/W2111320933","https://openalex.org/W2111795091","https://openalex.org/W2112090702","https://openalex.org/W2112555761","https://openalex.org/W2115048111","https://openalex.org/W2116988471","https://openalex.org/W2119043225","https://openalex.org/W2121277457","https://openalex.org/W2122863289","https://openalex.org/W2123634400","https://openalex.org/W2123733630","https://openalex.org/W2124166542","https://openalex.org/W2124463526","https://openalex.org/W2125910575","https://openalex.org/W2127351311","https://openalex.org/W2129482581","https://openalex.org/W2130687290","https://openalex.org/W2130790725","https://openalex.org/W2135688535","https://openalex.org/W2136850043","https://openalex.org/W2138312771","https://openalex.org/W2141012957","https://openalex.org/W2144656637","https://openalex.org/W2147874847","https://openalex.org/W2148606255","https://openalex.org/W2149310258","https://openalex.org/W2149500566","https://openalex.org/W2150420891","https://openalex.org/W2152653671","https://openalex.org/W2155019453","https://openalex.org/W2159675211","https://openalex.org/W2160103276","https://openalex.org/W2161604082","https://openalex.org/W2163485494","https://openalex.org/W2165210037","https://openalex.org/W2165253681","https://openalex.org/W2166043581","https://openalex.org/W2168637722","https://openalex.org/W2168708357","https://openalex.org/W2171403830","https://openalex.org/W2171631429","https://openalex.org/W2314293749","https://openalex.org/W3103071483","https://openalex.org/W4237572013","https://openalex.org/W4240943811","https://openalex.org/W6665125074"],"related_works":["https://openalex.org/W2017899917","https://openalex.org/W2481322495","https://openalex.org/W2898682754","https://openalex.org/W2889841093","https://openalex.org/W2365236913","https://openalex.org/W3194374240","https://openalex.org/W1972837291","https://openalex.org/W2798603412","https://openalex.org/W2094392347","https://openalex.org/W2015410041"],"abstract_inverted_index":{"Infectious":[0],"diseases":[1],"caused":[2],"by":[3],"pathogens,":[4],"including":[5],"viruses,":[6],"bacteria":[7],"and":[8,26,50,93,103,110],"parasites,":[9],"pose":[10],"a":[11],"serious":[12],"threat":[13],"to":[14,48,56,78,83,89,122,129],"human":[15],"health":[16],"worldwide.":[17],"Frequent":[18],"changes":[19],"in":[20,87],"the":[21,27,36,42,57,71,85,97,104,123],"pattern":[22],"of":[23,29,44,60,70,96],"infection":[24],"mechanisms":[25],"emergence":[28],"multidrug-resistant":[30],"strains":[31],"among":[32],"pathogens":[33],"have":[34],"weakened":[35],"current":[37],"treatment":[38],"regimen.":[39],"This":[40,117],"necessitates":[41],"development":[43],"new":[45],"therapeutic":[46],"interventions":[47],"prevent":[49],"control":[51],"such":[52,134],"diseases.":[53,91,136],"To":[54],"cater":[55],"need,":[58],"analysis":[59,95],"protein":[61,112],"interaction":[62,113],"networks":[63],"(PINs)":[64],"has":[65],"gained":[66],"importance":[67],"as":[68],"one":[69],"promising":[72],"strategies.":[73],"The":[74],"present":[75],"review":[76],"aims":[77],"discuss":[79],"various":[80],"computational":[81],"approaches":[82],"analyse":[84],"PINs":[86],"context":[88],"infectious":[90,135],"Topology":[92],"modularity":[94],"network":[98],"with":[99],"their":[100],"biological":[101],"relevance,":[102],"scenario":[105],"till":[106],"date":[107],"about":[108],"host-pathogen":[109],"intra-pathogenic":[111],"studies":[114],"were":[115],"delineated.":[116],"would":[118],"provide":[119],"useful":[120],"insights":[121],"research":[124],"community,":[125],"thereby":[126],"enabling":[127],"them":[128],"design":[130],"novel":[131],"biomedicine":[132],"against":[133]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":3}],"updated_date":"2026-08-26T07:47:46.906454","created_date":"2025-10-10T00:00:00"}
