{"id":"https://openalex.org/W2085522429","doi":"https://doi.org/10.1093/bib/bbt087","title":"High-throughput DNA sequence data compression","display_name":"High-throughput DNA sequence data compression","publication_year":2013,"publication_date":"2013-12-03","ids":{"openalex":"https://openalex.org/W2085522429","doi":"https://doi.org/10.1093/bib/bbt087","mag":"2085522429","pmid":"https://pubmed.ncbi.nlm.nih.gov/24300111"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbt087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbt087","pdf_url":"https://academic.oup.com/bib/article-pdf/16/1/1/5040812/bbt087.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/16/1/1/5040812/bbt087.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045099279","display_name":"Zijie Zhu","orcid":"https://orcid.org/0000-0002-1031-3399"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]},{"id":"https://openalex.org/I4210145386","display_name":"National Intelligence University","ror":"https://ror.org/049sfwc36","country_code":"US","type":"education","lineage":["https://openalex.org/I4210145386"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Z. Zhu","raw_affiliation_strings":["Zexuan Zhu is an Associate Professor at the Colloge of Computer Science and Software Engineering, Shenzhen University. His research interests lie in bioinformatics and computational intelligence","College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zexuan Zhu is an Associate Professor at the Colloge of Computer Science and Software Engineering, Shenzhen University. His research interests lie in bioinformatics and computational intelligence","institution_ids":["https://openalex.org/I4210145386"]},{"raw_affiliation_string":"College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100400246","display_name":"Yong Zhang","orcid":"https://orcid.org/0000-0003-0369-2076"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]},{"id":"https://openalex.org/I4210089348","display_name":"Data Archiving and Networked Services (DANS)","ror":"https://ror.org/008pnp284","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1322597698","https://openalex.org/I2800991832","https://openalex.org/I4210089348"]}],"countries":["CN","NL"],"is_corresponding":false,"raw_author_name":"Y. Zhang","raw_affiliation_strings":["Yongpeng Zhang is a MSc student at Shenzhen University. His research interests include data compression techniques and their applications to DNA sequencing data","College of Computer Science and Software Engineering, Shenzhen University Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Yongpeng Zhang is a MSc student at Shenzhen University. His research interests include data compression techniques and their applications to DNA sequencing data","institution_ids":["https://openalex.org/I4210089348"]},{"raw_affiliation_string":"College of Computer Science and Software Engineering, Shenzhen University Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025341885","display_name":"Zhen Ji","orcid":"https://orcid.org/0000-0003-4006-7456"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Z. Ji","raw_affiliation_strings":["Zhen Ji is a Professor at the Colloge of Computer Science and Software Engineering, Shenzhen University. His research interests include bioinformatics and signal processing","College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Zhen Ji is a Professor at the Colloge of Computer Science and Software Engineering, Shenzhen University. His research interests include bioinformatics and signal processing","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011186506","display_name":"Shan He","orcid":"https://orcid.org/0000-0003-1694-1465"},"institutions":[{"id":"https://openalex.org/I1334567473","display_name":"Mind Research Network","ror":"https://ror.org/032cjfs80","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1334567473"]},{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"S. He","raw_affiliation_strings":["Shan He is a Lecturer at the School of Computer Science, the University of Birmingham. His research interests include optimisation, data mining, complex network analysis and their applications to biomedical problems","Computer Science and Software Engineering, Shenzhen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shan He is a Lecturer at the School of Computer Science, the University of Birmingham. His research interests include optimisation, data mining, complex network analysis and their applications to biomedical problems","institution_ids":["https://openalex.org/I1334567473"]},{"raw_affiliation_string":"Computer Science and Software Engineering, Shenzhen University","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083812342","display_name":"Xiao Yang","orcid":"https://orcid.org/0000-0002-5429-9162"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]},{"id":"https://openalex.org/I4210151837","display_name":"High Throughput Biology (United States)","ror":"https://ror.org/05h1bjp83","country_code":"US","type":"company","lineage":["https://openalex.org/I4210151837"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"X. Yang","raw_affiliation_strings":["Xiao Yang is a computational biologist at the Broad Institute. His current research is focused on high throughput sequencing data analysis with applications on genomics and metagenomics","Broad INstitute"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Xiao Yang is a computational biologist at the Broad Institute. His current research is focused on high throughput sequencing data analysis with applications on genomics and metagenomics","institution_ids":["https://openalex.org/I4210151837"]},{"raw_affiliation_string":"Broad INstitute","institution_ids":["https://openalex.org/I107606265"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":12.656,"has_fulltext":true,"cited_by_count":105,"citation_normalized_percentile":{"value":0.98562062,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"16","issue":"1","first_page":"1","last_page":"15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7927367091178894},{"id":"https://openalex.org/keywords/data-compression","display_name":"Data compression","score":0.6732523441314697},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.6595938205718994},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.6140109300613403},{"id":"https://openalex.org/keywords/computer-data-storage","display_name":"Computer data storage","score":0.5263612866401672},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4569336771965027},{"id":"https://openalex.org/keywords/compression","display_name":"Compression (physics)","score":0.43638160824775696},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17504063248634338},{"id":"https://openalex.org/keywords/computer-hardware","display_name":"Computer hardware","score":0.11481329798698425}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7927367091178894},{"id":"https://openalex.org/C78548338","wikidata":"https://www.wikidata.org/wiki/Q2493","display_name":"Data compression","level":2,"score":0.6732523441314697},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.6595938205718994},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.6140109300613403},{"id":"https://openalex.org/C194739806","wikidata":"https://www.wikidata.org/wiki/Q66221","display_name":"Computer data storage","level":2,"score":0.5263612866401672},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4569336771965027},{"id":"https://openalex.org/C180016635","wikidata":"https://www.wikidata.org/wiki/Q2712821","display_name":"Compression (physics)","level":2,"score":0.43638160824775696},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17504063248634338},{"id":"https://openalex.org/C9390403","wikidata":"https://www.wikidata.org/wiki/Q3966","display_name":"Computer hardware","level":1,"score":0.11481329798698425},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044962","descriptor_name":"Data Compression","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/bib/bbt087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbt087","pdf_url":"https://academic.oup.com/bib/article-pdf/16/1/1/5040812/bbt087.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24300111","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24300111","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.963.577","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.963.577","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bib.oxfordjournals.org/content/early/2013/12/03/bib.bbt087.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.968.588","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.968.588","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bib.oxfordjournals.org/content/16/1/1.full.pdf","raw_type":"text"},{"id":"pmh:oai:pure.atira.dk:Publications/4eccbf71-3c32-45eb-8344-938a68b12db2","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/4eccbf71-3c32-45eb-8344-938a68b12db2","is_oa":true,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/4eccbf71-3c32-45eb-8344-938a68b12db2","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Zhu, Z, Zhang, Y, Ji, Z, He, S & Yang, X 2015, 'High-throughput DNA sequence data compression', Briefings in Bioinformatics, vol. 16, no. 1, pp. 1-15. https://doi.org/10.1093/bib/bbt087","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/4eccbf71-3c32-45eb-8344-938a68b12db2","is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/portal/en/publications/highthroughput-dna-sequence-data-compression(4eccbf71-3c32-45eb-8344-938a68b12db2).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":{"id":"doi:10.1093/bib/bbt087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbt087","pdf_url":"https://academic.oup.com/bib/article-pdf/16/1/1/5040812/bbt087.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.41999998688697815,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G1499457473","display_name":null,"funder_award_id":"61205092","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2382822222","display_name":"\u57fa\u4e8e\u81ea\u751f\u5f0f\u591a\u76ee\u6807Memetic\u7b97\u6cd5\u7684\u9ad8\u7ef4\u6570\u636e\u7279\u5f81\u9009\u62e9\u7814\u7a76","funder_award_id":"61001185","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3653525014","display_name":null,"funder_award_id":"U1201256","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4482587577","display_name":null,"funder_award_id":"IE111069","funder_id":"https://openalex.org/F4320320006","funder_display_name":"Royal Society"},{"id":"https://openalex.org/G5801539079","display_name":null,"funder_award_id":"S2012010009545","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"},{"id":"https://openalex.org/G6364900093","display_name":"\u4ee3\u8c22\u7ec4\u5b66\u4e2d\u7684\u751f\u7269\u542f\u53d1\u5f0f\u9ad8\u7ef4\u6570\u636e\u7279\u5f81\u9009\u62e9\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61171125","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320320006","display_name":"Royal Society","ror":"https://ror.org/03wnrjx87"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321921","display_name":"Natural Science Foundation of Guangdong Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2085522429.pdf","grobid_xml":"https://content.openalex.org/works/W2085522429.grobid-xml"},"referenced_works_count":80,"referenced_works":["https://openalex.org/W105342246","https://openalex.org/W153132339","https://openalex.org/W788498898","https://openalex.org/W1496422306","https://openalex.org/W1510807444","https://openalex.org/W1547966682","https://openalex.org/W1574675314","https://openalex.org/W1929174210","https://openalex.org/W1965359119","https://openalex.org/W1967156765","https://openalex.org/W1970218893","https://openalex.org/W1970231722","https://openalex.org/W1987370597","https://openalex.org/W1996352193","https://openalex.org/W2000466469","https://openalex.org/W2001938458","https://openalex.org/W2005112508","https://openalex.org/W2010928148","https://openalex.org/W2019732294","https://openalex.org/W2020255088","https://openalex.org/W2021487990","https://openalex.org/W2024975965","https://openalex.org/W2025583382","https://openalex.org/W2032866129","https://openalex.org/W2050140640","https://openalex.org/W2051929999","https://openalex.org/W2057791956","https://openalex.org/W2060108852","https://openalex.org/W2061680337","https://openalex.org/W2065783627","https://openalex.org/W2072021854","https://openalex.org/W2092880969","https://openalex.org/W2093931624","https://openalex.org/W2096258819","https://openalex.org/W2096791516","https://openalex.org/W2099111195","https://openalex.org/W2103441770","https://openalex.org/W2105583187","https://openalex.org/W2107745473","https://openalex.org/W2108234281","https://openalex.org/W2110553099","https://openalex.org/W2110800670","https://openalex.org/W2111044311","https://openalex.org/W2112509895","https://openalex.org/W2115613939","https://openalex.org/W2117608012","https://openalex.org/W2118526609","https://openalex.org/W2124985265","https://openalex.org/W2126353995","https://openalex.org/W2126829482","https://openalex.org/W2127912200","https://openalex.org/W2128114769","https://openalex.org/W2128777897","https://openalex.org/W2131106408","https://openalex.org/W2134814259","https://openalex.org/W2136651963","https://openalex.org/W2137661542","https://openalex.org/W2137892587","https://openalex.org/W2138196010","https://openalex.org/W2138270253","https://openalex.org/W2142003566","https://openalex.org/W2143423077","https://openalex.org/W2146028503","https://openalex.org/W2147217460","https://openalex.org/W2147492358","https://openalex.org/W2155471967","https://openalex.org/W2157745386","https://openalex.org/W2159084616","https://openalex.org/W2159647614","https://openalex.org/W2159683766","https://openalex.org/W2161488606","https://openalex.org/W2163294786","https://openalex.org/W2164372370","https://openalex.org/W2165272228","https://openalex.org/W2166127198","https://openalex.org/W2166588423","https://openalex.org/W2171571559","https://openalex.org/W2911940095","https://openalex.org/W3098364857","https://openalex.org/W4233928114"],"related_works":["https://openalex.org/W1992807924","https://openalex.org/W2062427795","https://openalex.org/W2360553097","https://openalex.org/W2354642172","https://openalex.org/W2361349944","https://openalex.org/W2164030956","https://openalex.org/W2968159251","https://openalex.org/W2110800108","https://openalex.org/W2322516069","https://openalex.org/W2619217783"],"abstract_inverted_index":{"The":[0],"exponential":[1],"growth":[2],"of":[3,39,93],"high-throughput":[4],"DNA":[5],"sequence":[6],"data":[7,14,44,52,76,79,101],"has":[8],"posed":[9],"great":[10],"challenges":[11,121],"to":[12,24,34],"genomic":[13,51,100],"storage,":[15],"retrieval":[16],"and":[17,42,48,81,88,102,114,122],"transmission.":[18],"Compression":[19],"is":[20],"a":[21,64,90],"critical":[22],"tool":[23],"address":[25],"these":[26],"challenges,":[27],"where":[28],"many":[29],"methods":[30,97],"have":[31],"been":[32],"developed":[33],"reduce":[35],"the":[36,40,94,119],"storage":[37],"size":[38],"genomes":[41],"sequencing":[43],"(reads,":[45],"quality":[46],"scores":[47],"metadata).":[49],"However,":[50],"are":[53],"being":[54],"generated":[55],"faster":[56],"than":[57],"they":[58],"could":[59,73],"be":[60],"meaningfully":[61],"analyzed,":[62],"leaving":[63],"large":[65],"scope":[66],"for":[67,99,112,125],"developing":[68],"novel":[69],"compression":[70,96,107,113],"algorithms":[71],"that":[72],"directly":[74],"facilitate":[75],"analysis":[77],"beyond":[78],"transfer":[80],"storage.":[82],"In":[83],"this":[84],"article,":[85],"we":[86],"categorize":[87],"provide":[89],"comprehensive":[91],"review":[92],"existing":[95],"specialized":[98],"present":[103,118],"experimental":[104],"results":[105],"on":[106],"ratio,":[108],"memory":[109],"usage,":[110],"time":[111],"decompression.":[115],"We":[116],"further":[117],"remaining":[120],"potential":[123],"directions":[124],"future":[126],"research.":[127]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":10},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":18},{"year":2017,"cited_by_count":14},{"year":2016,"cited_by_count":13},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":7}],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-10T00:00:00"}
