{"id":"https://openalex.org/W2146985413","doi":"https://doi.org/10.1093/bib/bbs052","title":"Assessing protein conformational sampling methods based on bivariate lag-distributions of backbone angles","display_name":"Assessing protein conformational sampling methods based on bivariate lag-distributions of backbone angles","publication_year":2012,"publication_date":"2012-08-27","ids":{"openalex":"https://openalex.org/W2146985413","doi":"https://doi.org/10.1093/bib/bbs052","mag":"2146985413","pmid":"https://pubmed.ncbi.nlm.nih.gov/22926831"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbs052","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbs052","pdf_url":"https://academic.oup.com/bib/article-pdf/14/6/724/469301/bbs052.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/14/6/724/469301/bbs052.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010793158","display_name":"Mehdi Maadooliat","orcid":"https://orcid.org/0000-0002-5408-2676"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]}],"countries":["SA"],"is_corresponding":true,"raw_author_name":"M. Maadooliat","raw_affiliation_strings":["Mathematical and Computer Sciences and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia, xin.gao@kaust.edu.sa. Jianhua Z. Huang, Department of Statistics, 447 Blocker Building, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 (USA), E-mail: jianhua@stat.tamu.edu","King Abdullah University of Science and Technology, Jeddah, Saudi Arabia"],"affiliations":[{"raw_affiliation_string":"Mathematical and Computer Sciences and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia, xin.gao@kaust.edu.sa. Jianhua Z. Huang, Department of Statistics, 447 Blocker Building, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 (USA), E-mail: jianhua@stat.tamu.edu","institution_ids":[]},{"raw_affiliation_string":"King Abdullah University of Science and Technology, Jeddah, Saudi Arabia","institution_ids":["https://openalex.org/I71920554"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100618900","display_name":"Xin Gao","orcid":"https://orcid.org/0000-0002-7108-3574"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["SA","US"],"is_corresponding":false,"raw_author_name":"X. Gao","raw_affiliation_strings":["Mathematical and Computer Sciences and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia,","Institute of Applied Mathematics and Computational Science (IAMCS)-King Abdullah University of Science","Department of Statistics, 447 Blocker Building, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 (USA"],"affiliations":[{"raw_affiliation_string":"Mathematical and Computer Sciences and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia,","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"Institute of Applied Mathematics and Computational Science (IAMCS)-King Abdullah University of Science","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"Department of Statistics, 447 Blocker Building, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 (USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101462938","display_name":"Jianhua Z. Huang","orcid":"https://orcid.org/0000-0002-7735-3002"},"institutions":[{"id":"https://openalex.org/I71920554","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38","country_code":"SA","type":"education","lineage":["https://openalex.org/I71920554"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["SA","US"],"is_corresponding":false,"raw_author_name":"J. Z. Huang","raw_affiliation_strings":["Department of Statistics, 447 Blocker Building, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 (USA","Institute of Applied Mathematics and Computational Science (IAMCS)-King Abdullah University of Science","Mathematical and Computer Sciences and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia,"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, 447 Blocker Building, Texas A&M University, 3143 TAMU, College Station, TX 77843-3143 (USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Institute of Applied Mathematics and Computational Science (IAMCS)-King Abdullah University of Science","institution_ids":["https://openalex.org/I71920554"]},{"raw_affiliation_string":"Mathematical and Computer Sciences and Engineering Division, 4700 King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia,","institution_ids":["https://openalex.org/I71920554"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5010793158"],"corresponding_institution_ids":["https://openalex.org/I71920554"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":0.6723,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.69532926,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"14","issue":"6","first_page":"724","last_page":"736"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9926000237464905,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dihedral-angle","display_name":"Dihedral angle","score":0.7788338661193848},{"id":"https://openalex.org/keywords/nonparametric-statistics","display_name":"Nonparametric statistics","score":0.5746434926986694},{"id":"https://openalex.org/keywords/bivariate-analysis","display_name":"Bivariate analysis","score":0.562420129776001},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5604121685028076},{"id":"https://openalex.org/keywords/parametric-statistics","display_name":"Parametric statistics","score":0.5457512736320496},{"id":"https://openalex.org/keywords/sampling","display_name":"Sampling (signal processing)","score":0.5181766748428345},{"id":"https://openalex.org/keywords/singular-value-decomposition","display_name":"Singular value decomposition","score":0.49552595615386963},{"id":"https://openalex.org/keywords/joint-probability-distribution","display_name":"Joint probability distribution","score":0.46778973937034607},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.46176403760910034},{"id":"https://openalex.org/keywords/lag","display_name":"Lag","score":0.4555682837963104},{"id":"https://openalex.org/keywords/distribution","display_name":"Distribution (mathematics)","score":0.4110623896121979},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.31829556822776794},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.19831332564353943},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.1299569308757782},{"id":"https://openalex.org/keywords/mathematical-analysis","display_name":"Mathematical analysis","score":0.12427258491516113},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.1020246148109436},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.09066459536552429}],"concepts":[{"id":"https://openalex.org/C89025888","wikidata":"https://www.wikidata.org/wiki/Q911907","display_name":"Dihedral angle","level":4,"score":0.7788338661193848},{"id":"https://openalex.org/C102366305","wikidata":"https://www.wikidata.org/wiki/Q1097688","display_name":"Nonparametric statistics","level":2,"score":0.5746434926986694},{"id":"https://openalex.org/C64341305","wikidata":"https://www.wikidata.org/wiki/Q4919225","display_name":"Bivariate analysis","level":2,"score":0.562420129776001},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5604121685028076},{"id":"https://openalex.org/C117251300","wikidata":"https://www.wikidata.org/wiki/Q1849855","display_name":"Parametric statistics","level":2,"score":0.5457512736320496},{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.5181766748428345},{"id":"https://openalex.org/C22789450","wikidata":"https://www.wikidata.org/wiki/Q420904","display_name":"Singular value decomposition","level":2,"score":0.49552595615386963},{"id":"https://openalex.org/C18653775","wikidata":"https://www.wikidata.org/wiki/Q1333358","display_name":"Joint probability distribution","level":2,"score":0.46778973937034607},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.46176403760910034},{"id":"https://openalex.org/C75778745","wikidata":"https://www.wikidata.org/wiki/Q342626","display_name":"Lag","level":2,"score":0.4555682837963104},{"id":"https://openalex.org/C110121322","wikidata":"https://www.wikidata.org/wiki/Q865811","display_name":"Distribution (mathematics)","level":2,"score":0.4110623896121979},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.31829556822776794},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.19831332564353943},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.1299569308757782},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.12427258491516113},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.1020246148109436},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.09066459536552429},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.0},{"id":"https://openalex.org/C112887158","wikidata":"https://www.wikidata.org/wiki/Q169324","display_name":"Hydrogen bond","level":3,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbs052","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbs052","pdf_url":"https://academic.oup.com/bib/article-pdf/14/6/724/469301/bbs052.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22926831","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22926831","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:epublications.marquette.edu:mscs_fac-1156","is_oa":false,"landing_page_url":"https://epublications.marquette.edu/mscs_fac/156","pdf_url":null,"source":{"id":"https://openalex.org/S4306401682","display_name":"e-Publications@Marquette (Marquette University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I102461120","host_organization_name":"Marquette University","host_organization_lineage":["https://openalex.org/I102461120"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Mathematics, Statistics and Computer Science Faculty Research and Publications","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3888108","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3888108","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmh:oai:repository.kaust.edu.sa:10754/562280","is_oa":false,"landing_page_url":"http://hdl.handle.net/10754/562280","pdf_url":null,"source":{"id":"https://openalex.org/S4306401596","display_name":"King Abdullah University of Science and Technology Repository (King Abdullah University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I71920554","host_organization_name":"King Abdullah University of Science and Technology","host_organization_lineage":["https://openalex.org/I71920554"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbs052","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbs052","pdf_url":"https://academic.oup.com/bib/article-pdf/14/6/724/469301/bbs052.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1431898071","display_name":"A new approach of statistical modeling and analysis of massive spatial data sets","funder_award_id":"1007618","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5402984013","display_name":"Statistical Methods for Complex Functional Data","funder_award_id":"0907170","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7345907321","display_name":null,"funder_award_id":"GRP-CF-2011-19-P-Gao-Huang","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G7900597298","display_name":null,"funder_award_id":"KUS-CI-016-04","funder_id":"https://openalex.org/F4320322320","funder_display_name":"King Abdullah University of Science and Technology"},{"id":"https://openalex.org/G8487555798","display_name":null,"funder_award_id":"CA57030","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320322320","display_name":"King Abdullah University of Science and Technology","ror":"https://ror.org/01q3tbs38"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2146985413.pdf","grobid_xml":"https://content.openalex.org/works/W2146985413.grobid-xml"},"referenced_works_count":66,"referenced_works":["https://openalex.org/W1490138956","https://openalex.org/W1508596864","https://openalex.org/W1513618424","https://openalex.org/W1606011614","https://openalex.org/W1632044512","https://openalex.org/W1969621320","https://openalex.org/W1970197953","https://openalex.org/W1972949070","https://openalex.org/W1975403846","https://openalex.org/W1985225270","https://openalex.org/W1989777815","https://openalex.org/W1997182337","https://openalex.org/W1998318250","https://openalex.org/W1998757880","https://openalex.org/W2004461664","https://openalex.org/W2019138789","https://openalex.org/W2020230520","https://openalex.org/W2022713619","https://openalex.org/W2024035237","https://openalex.org/W2026648849","https://openalex.org/W2037312364","https://openalex.org/W2043304335","https://openalex.org/W2045777307","https://openalex.org/W2048918663","https://openalex.org/W2049902088","https://openalex.org/W2052056634","https://openalex.org/W2056568469","https://openalex.org/W2061095207","https://openalex.org/W2062957518","https://openalex.org/W2067190679","https://openalex.org/W2073758233","https://openalex.org/W2074421756","https://openalex.org/W2076916984","https://openalex.org/W2082667898","https://openalex.org/W2089035513","https://openalex.org/W2089554835","https://openalex.org/W2092640018","https://openalex.org/W2097744604","https://openalex.org/W2105961968","https://openalex.org/W2106976556","https://openalex.org/W2109801072","https://openalex.org/W2114441129","https://openalex.org/W2117020466","https://openalex.org/W2119619424","https://openalex.org/W2121876872","https://openalex.org/W2129942405","https://openalex.org/W2130479394","https://openalex.org/W2133578061","https://openalex.org/W2135484509","https://openalex.org/W2144417432","https://openalex.org/W2145149019","https://openalex.org/W2145268834","https://openalex.org/W2152655599","https://openalex.org/W2152811165","https://openalex.org/W2153191110","https://openalex.org/W2154106236","https://openalex.org/W2155039674","https://openalex.org/W2155201844","https://openalex.org/W2161151688","https://openalex.org/W2166912610","https://openalex.org/W2168337765","https://openalex.org/W3103426803","https://openalex.org/W3199104097","https://openalex.org/W3200464911","https://openalex.org/W3201413583","https://openalex.org/W4241935390"],"related_works":["https://openalex.org/W2383655479","https://openalex.org/W4235062529","https://openalex.org/W2117322591","https://openalex.org/W2152457604","https://openalex.org/W1978117141","https://openalex.org/W3003594144","https://openalex.org/W2026215830","https://openalex.org/W2769554013","https://openalex.org/W2588282541","https://openalex.org/W1972880882"],"abstract_inverted_index":{"Despite":[0],"considerable":[1],"progress":[2],"in":[3,17,96],"the":[4,13,33,52,59,80,86,107,111,116,119,133,143,147,151,167,171,183,186,189,209],"past":[5],"decades,":[6],"protein":[7,38,60,87],"structure":[8],"prediction":[9,129],"remains":[10],"one":[11],"of":[12,37,48,51,70,94,110,118,142,170,185,188,211],"major":[14],"unsolved":[15],"problems":[16],"computational":[18],"biology.":[19],"Angular-sampling-based":[20],"methods":[21,72,138],"have":[22],"been":[23],"extensively":[24],"studied":[25],"recently":[26],"due":[27],"to":[28,31,84,104,205,225],"their":[29],"ability":[30],"capture":[32],"continuous":[34],"conformational":[35],"space":[36],"structures.":[39],"The":[40],"literature":[41],"has":[42],"focused":[43],"on":[44],"using":[45,139,156,177,191],"a":[46,67,91,97,128,157,178,196,218],"variety":[47],"parametric":[49],"models":[50],"sequential":[53],"dependencies":[54],"between":[55],"angle":[56],"pairs":[57],"along":[58],"chains.":[61],"In":[62],"this":[63],"article,":[64],"we":[65,198,216],"present":[66],"thorough":[68],"review":[69],"angular-sampling-based":[71],"by":[73,127],"assessing":[74],"three":[75],"main":[76,148],"questions:":[77],"What":[78,89,114],"is":[79,90,115],"best":[81],"distribution":[82,109,169],"type":[83],"model":[85,99,134,213],"angles?":[88,112],"reasonable":[92],"number":[93],"components":[95],"mixture":[98],"that":[100,123,221],"should":[101,124],"be":[102,125,154,223],"considered":[103,126],"accurately":[105],"parameterize":[106],"joint":[108,168],"and":[113,181,202,207],"order":[117],"local":[120],"sequence-structure":[121],"dependency":[122],"method?":[130],"We":[131],"assess":[132],"fits":[135],"for":[136],"different":[137,175,212],"bivariate":[140],"lag-distributions":[141],"dihedral/planar":[144,172],"angles.":[145],"Moreover,":[146],"information":[149],"across":[150],"lags":[152,176],"can":[153,222],"extracted":[155],"technique":[158],"called":[159],"Lag":[160],"singular":[161,192],"value":[162,193],"decomposition":[163],"(LagSVD),":[164],"which":[165],"considers":[166],"angles":[173,190],"over":[174],"nonparametric":[179],"approach":[180],"monitors":[182],"behavior":[184],"lag-distribution":[187],"decomposition.":[194],"As":[195],"result,":[197],"developed":[199,217],"graphical":[200],"tools":[201],"numerical":[203],"measurements":[204],"compare":[206],"evaluate":[208],"performance":[210],"fits.":[214],"Furthermore,":[215],"web-tool":[219],"(http://www.stat.tamu.edu/\u223cmadoliat/LagSVD)":[220],"used":[224],"produce":[226],"informative":[227],"animations.":[228]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":3}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
