{"id":"https://openalex.org/W2150577353","doi":"https://doi.org/10.1093/bib/bbs034","title":"Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?","display_name":"Data mining in the Life Sciences with Random Forest: a walk in the park or lost in the jungle?","publication_year":2012,"publication_date":"2012-07-10","ids":{"openalex":"https://openalex.org/W2150577353","doi":"https://doi.org/10.1093/bib/bbs034","mag":"2150577353","pmid":"https://pubmed.ncbi.nlm.nih.gov/22786785"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbs034","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbs034","pdf_url":"https://academic.oup.com/bib/article-pdf/14/3/315/709597/bbs034.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/14/3/315/709597/bbs034.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018538550","display_name":"Wouter G. Touw","orcid":"https://orcid.org/0000-0002-0407-3923"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"W. G. Touw","raw_affiliation_strings":["Radboud University of Nijmegen, the Netherlands","Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Radboud University of Nijmegen, the Netherlands","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040732518","display_name":"Jumamurat R. Bayjanov","orcid":"https://orcid.org/0000-0002-0637-9950"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]},{"id":"https://openalex.org/I4210121370","display_name":"Next Generation Technology (United States)","ror":"https://ror.org/02hswyz47","country_code":"US","type":"company","lineage":["https://openalex.org/I4210121370"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"J. R. Bayjanov","raw_affiliation_strings":["Jumamurat Bayjanov is a postdoctoral researcher at the Radboud University Medical Centre, the Netherlands. He is involved in analyzing next-generation sequence data and developing machine-learning tools","Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jumamurat Bayjanov is a postdoctoral researcher at the Radboud University Medical Centre, the Netherlands. He is involved in analyzing next-generation sequence data and developing machine-learning tools","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210121370"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079662264","display_name":"Lex Overmars","orcid":null},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"L. Overmars","raw_affiliation_strings":["Lex Overmars is a PhD student at the Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre. His research focuses on the analysis of prokaryotic regulatory elements","Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lex Overmars is a PhD student at the Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre. His research focuses on the analysis of prokaryotic regulatory elements","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037534812","display_name":"Lisa I. Backus","orcid":"https://orcid.org/0000-0001-8058-8366"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I200966471","display_name":"Prudential Financial (United States)","ror":"https://ror.org/05fy6my48","country_code":"US","type":"company","lineage":["https://openalex.org/I200966471"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"L. Backus","raw_affiliation_strings":["Lennart Backus is developing phylogenomics techniques for sequence-based prediction of microbial interactions at the Radboud University Medical Centre in a PhD project funded by TI Food and Nutrition","Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lennart Backus is developing phylogenomics techniques for sequence-based prediction of microbial interactions at the Radboud University Medical Centre in a PhD project funded by TI Food and Nutrition","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I200966471","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089395125","display_name":"Jos Boekhorst","orcid":"https://orcid.org/0000-0002-4807-7838"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"J. Boekhorst","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063076124","display_name":"Michiel Wels","orcid":null},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"M. Wels","raw_affiliation_strings":["Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024324359","display_name":"Sacha A. F. T. van Hijum","orcid":"https://orcid.org/0000-0003-0741-2991"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]},{"id":"https://openalex.org/I2802934949","display_name":"Radboud University Medical Center","ror":"https://ror.org/05wg1m734","country_code":"NL","type":"funder","lineage":["https://openalex.org/I2802934949"]},{"id":"https://openalex.org/I4210109357","display_name":"Radboud Institute for Molecular Life Sciences","ror":"https://ror.org/01yb10j39","country_code":"NL","type":"facility","lineage":["https://openalex.org/I145872427","https://openalex.org/I4210109357"]},{"id":"https://openalex.org/I4210143578","display_name":"Genomics England","ror":"https://ror.org/04rxxfz69","country_code":"GB","type":"other","lineage":["https://openalex.org/I1311074006","https://openalex.org/I4210143578"]}],"countries":["GB","NL"],"is_corresponding":false,"raw_author_name":"S. A. F. T. van Hijum","raw_affiliation_strings":["Sacha van Hijum is a senior scientist bioinformatics at NIZO food research and group leader of the bacterial genomics group, Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics research at the bacterial genomics group focuses on establishing the relation between microbial consortia and health","Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","the Radboud University Medical Centre, the Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sacha van Hijum is a senior scientist bioinformatics at NIZO food research and group leader of the bacterial genomics group, Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics research at the bacterial genomics group focuses on establishing the relation between microbial consortia and health","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210143578"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics at the Radboud University Medical Centre. Bioinformatics","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949"]},{"raw_affiliation_string":"Sciences at the Radboud University of Nijmegen, the Netherlands. He specializes in","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"the Radboud University Medical Centre, the Netherlands","institution_ids":["https://openalex.org/I145872427","https://openalex.org/I2802934949","https://openalex.org/I4210109357"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3885,"currency":"USD","value_usd":3885},"apc_paid":{"value":3885,"currency":"USD","value_usd":3885},"fwci":9.1062,"has_fulltext":true,"cited_by_count":462,"citation_normalized_percentile":{"value":0.98750959,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"14","issue":"3","first_page":"315","last_page":"326"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/jungle","display_name":"Jungle","score":0.9838384985923767},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.6275850534439087},{"id":"https://openalex.org/keywords/random-walk","display_name":"Random walk","score":0.5829858779907227},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.39600226283073425},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.39456358551979065},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35439160466194153},{"id":"https://openalex.org/keywords/forestry","display_name":"Forestry","score":0.3255980610847473},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2312757670879364},{"id":"https://openalex.org/keywords/archaeology","display_name":"Archaeology","score":0.22665706276893616},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.15826073288917542},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.14612874388694763}],"concepts":[{"id":"https://openalex.org/C2776410375","wikidata":"https://www.wikidata.org/wiki/Q191086","display_name":"Jungle","level":2,"score":0.9838384985923767},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.6275850534439087},{"id":"https://openalex.org/C121194460","wikidata":"https://www.wikidata.org/wiki/Q856741","display_name":"Random walk","level":2,"score":0.5829858779907227},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.39600226283073425},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.39456358551979065},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35439160466194153},{"id":"https://openalex.org/C97137747","wikidata":"https://www.wikidata.org/wiki/Q38112","display_name":"Forestry","level":1,"score":0.3255980610847473},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2312757670879364},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.22665706276893616},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15826073288917542},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.14612874388694763}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbs034","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbs034","pdf_url":"https://academic.oup.com/bib/article-pdf/14/3/315/709597/bbs034.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22786785","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22786785","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2656448","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3659301","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:repository.ubn.ru.nl:2066/119255","is_oa":false,"landing_page_url":"http://hdl.handle.net/2066/119255","pdf_url":null,"source":{"id":"https://openalex.org/S4306401067","display_name":"Radboud Repository (Radboud University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145872427","host_organization_name":"Radboud University Nijmegen","host_organization_lineage":["https://openalex.org/I145872427"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article / Letter to editor"}],"best_oa_location":{"id":"doi:10.1093/bib/bbs034","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbs034","pdf_url":"https://academic.oup.com/bib/article-pdf/14/3/315/709597/bbs034.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.550000011920929,"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production"},{"score":0.5,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2150577353.pdf","grobid_xml":"https://content.openalex.org/works/W2150577353.grobid-xml"},"referenced_works_count":112,"referenced_works":["https://openalex.org/W273955616","https://openalex.org/W1498436455","https://openalex.org/W1520812622","https://openalex.org/W1539593569","https://openalex.org/W1554944419","https://openalex.org/W1594031697","https://openalex.org/W1599871777","https://openalex.org/W1600199800","https://openalex.org/W1606766780","https://openalex.org/W1678356000","https://openalex.org/W1797956629","https://openalex.org/W1817561967","https://openalex.org/W1875061881","https://openalex.org/W1967320885","https://openalex.org/W1971042695","https://openalex.org/W1975990978","https://openalex.org/W1978005360","https://openalex.org/W1978486653","https://openalex.org/W1990932448","https://openalex.org/W1993601578","https://openalex.org/W1995341919","https://openalex.org/W1997107638","https://openalex.org/W1997875345","https://openalex.org/W2001619934","https://openalex.org/W2001710803","https://openalex.org/W2008667922","https://openalex.org/W2009374545","https://openalex.org/W2012219352","https://openalex.org/W2014841186","https://openalex.org/W2022441134","https://openalex.org/W2023098599","https://openalex.org/W2031494645","https://openalex.org/W2032230795","https://openalex.org/W2034489756","https://openalex.org/W2035778775","https://openalex.org/W2037306412","https://openalex.org/W2040870580","https://openalex.org/W2041032262","https://openalex.org/W2044863747","https://openalex.org/W2045031658","https://openalex.org/W2046649434","https://openalex.org/W2047774682","https://openalex.org/W2049738506","https://openalex.org/W2053088580","https://openalex.org/W2053355118","https://openalex.org/W2057545775","https://openalex.org/W2057847565","https://openalex.org/W2058498750","https://openalex.org/W2058646847","https://openalex.org/W2061574900","https://openalex.org/W2062403173","https://openalex.org/W2064099652","https://openalex.org/W2067186215","https://openalex.org/W2068873381","https://openalex.org/W2071391537","https://openalex.org/W2078769511","https://openalex.org/W2079591220","https://openalex.org/W2083551126","https://openalex.org/W2086099578","https://openalex.org/W2087347434","https://openalex.org/W2091374137","https://openalex.org/W2096279453","https://openalex.org/W2098740506","https://openalex.org/W2100827857","https://openalex.org/W2101298000","https://openalex.org/W2103979596","https://openalex.org/W2108028755","https://openalex.org/W2108723074","https://openalex.org/W2112081648","https://openalex.org/W2112269540","https://openalex.org/W2114973325","https://openalex.org/W2115380778","https://openalex.org/W2117460135","https://openalex.org/W2118737745","https://openalex.org/W2119821739","https://openalex.org/W2119842880","https://openalex.org/W2120204563","https://openalex.org/W2121907028","https://openalex.org/W2122600131","https://openalex.org/W2122893222","https://openalex.org/W2123427204","https://openalex.org/W2123998733","https://openalex.org/W2126218947","https://openalex.org/W2128207034","https://openalex.org/W2131822674","https://openalex.org/W2133138357","https://openalex.org/W2135893370","https://openalex.org/W2136204986","https://openalex.org/W2137219016","https://openalex.org/W2139070508","https://openalex.org/W2139639280","https://openalex.org/W2140407975","https://openalex.org/W2141270567","https://openalex.org/W2143481518","https://openalex.org/W2143544846","https://openalex.org/W2144327682","https://openalex.org/W2144587714","https://openalex.org/W2145786566","https://openalex.org/W2145835338","https://openalex.org/W2152447806","https://openalex.org/W2152905639","https://openalex.org/W2153921000","https://openalex.org/W2154298141","https://openalex.org/W2155770902","https://openalex.org/W2164050575","https://openalex.org/W2165118109","https://openalex.org/W2171558600","https://openalex.org/W2911964244","https://openalex.org/W2964057329","https://openalex.org/W3085162807","https://openalex.org/W4246259708","https://openalex.org/W4249977334"],"related_works":["https://openalex.org/W604776852","https://openalex.org/W2156795617","https://openalex.org/W1524104001","https://openalex.org/W1900808973","https://openalex.org/W4239404776","https://openalex.org/W4239501966","https://openalex.org/W1561523934","https://openalex.org/W2059082536","https://openalex.org/W3122613655","https://openalex.org/W2808045821"],"abstract_inverted_index":{"In":[0,89],"the":[1,15,40,82,90,131,178,190,193,196,204,206,220],"Life":[2,91],"Sciences":[3],"'omics'":[4],"data":[5,19,87,179,230],"is":[6,75,94],"increasingly":[7],"generated":[8],"by":[9,189],"different":[10,65,165],"high-throughput":[11],"technologies.":[12],"Often":[13],"only":[14],"integration":[16],"of":[17,84,109,128,130,139,151,158,167,195,203,208],"these":[18,85,183],"allows":[20],"uncovering":[21],"biological":[22,221],"insights":[23,222],"that":[24,153,217,223],"can":[25,172,224],"be":[26,146,175,225],"experimentally":[27],"validated":[28],"or":[29,117,212],"mechanistically":[30],"modelled,":[31],"i.e.":[32],"sophisticated":[33],"computational":[34],"approaches":[35],"are":[36,122,184],"required":[37],"to":[38,63,205],"extract":[39],"complex":[41,228],"non-linear":[42],"trends":[43],"present":[44],"in":[45,59,173],"omics":[46,114,229],"data.":[47],"Classification":[48],"techniques":[49],"allow":[50,218],"training":[51],"a":[52,76,101,126,137,149,155,164],"model":[53],"based":[54],"on":[55,107],"variables":[56,110,116,121],"(e.g.":[57,67],"SNPs":[58],"genetic":[60],"association":[61],"studies)":[62],"separate":[64],"classes":[66],"healthy":[68],"subjects":[69],"versus":[70],"patients).":[71],"Random":[72],"Forest":[73],"(RF)":[74],"versatile":[77],"classification":[78,98,197],"algorithm":[79,191],"suited":[80],"for":[81,111,125,148,163],"analysis":[83],"large":[86],"sets.":[88],"Sciences,":[92],"RF":[93,97,181,215],"popular":[95],"because":[96],"models":[99],"have":[100,154],"high-prediction":[102],"accuracy":[103],"and":[104],"provide":[105],"information":[106],"importance":[108],"classification.":[112],"For":[113,134],"data,":[115],"conditional":[118,170],"relations":[119],"between":[120],"typically":[123],"important":[124,147,162],"subset":[127,150,166],"samples":[129],"same":[132],"class.":[133],"example:":[135],"within":[136],"class":[138],"cancer":[140],"patients":[141,152],"certain":[142],"SNP":[143],"combinations":[144],"may":[145],"specific":[156],"subtype":[157],"cancer,":[159],"but":[160],"not":[161],"patients.":[168],"These":[169],"relationships":[171],"principle":[174],"uncovered":[176],"from":[177,227],"with":[180],"as":[182],"implicitly":[185],"taken":[186],"into":[187],"account":[188],"during":[192],"creation":[194],"model.":[198],"This":[199],"review":[200],"details":[201],"some":[202],"best":[207],"our":[209],"knowledge":[210],"rarely":[211],"never":[213],"used":[214],"properties":[216],"maximizing":[219],"extracted":[226],"sets":[231],"using":[232],"RF.":[233]},"counts_by_year":[{"year":2026,"cited_by_count":20},{"year":2025,"cited_by_count":34},{"year":2024,"cited_by_count":29},{"year":2023,"cited_by_count":30},{"year":2022,"cited_by_count":71},{"year":2021,"cited_by_count":42},{"year":2020,"cited_by_count":40},{"year":2019,"cited_by_count":39},{"year":2018,"cited_by_count":31},{"year":2017,"cited_by_count":29},{"year":2016,"cited_by_count":24},{"year":2015,"cited_by_count":22},{"year":2014,"cited_by_count":30},{"year":2013,"cited_by_count":19},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-28T12:50:07.497085","created_date":"2016-06-24T00:00:00"}
