{"id":"https://openalex.org/W2125200271","doi":"https://doi.org/10.1093/bib/bbr011","title":"Old friends in new guise: repositioning of known drugs with structural bioinformatics","display_name":"Old friends in new guise: repositioning of known drugs with structural bioinformatics","publication_year":2011,"publication_date":"2011-03-26","ids":{"openalex":"https://openalex.org/W2125200271","doi":"https://doi.org/10.1093/bib/bbr011","mag":"2125200271","pmid":"https://pubmed.ncbi.nlm.nih.gov/21441562"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbr011","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbr011","pdf_url":"https://academic.oup.com/bib/article-pdf/12/4/312/663355/bbr011.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/12/4/312/663355/bbr011.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034265176","display_name":"V. Joachim Haupt","orcid":"https://orcid.org/0000-0003-0547-1285"},"institutions":[{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"V. J. Haupt","raw_affiliation_strings":["Bioinformatics Group, BIOTEC of TU Dresden, Germany"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Group, BIOTEC of TU Dresden, Germany","institution_ids":["https://openalex.org/I4210148697"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016411406","display_name":"Michael Schroeder","orcid":"https://orcid.org/0000-0003-2848-6949"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. Schroeder","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5034265176"],"corresponding_institution_ids":["https://openalex.org/I4210148697"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":15.0647,"has_fulltext":false,"cited_by_count":144,"citation_normalized_percentile":{"value":0.99505804,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"12","issue":"4","first_page":"312","last_page":"326"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11440","display_name":"Click Chemistry and Applications","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.7410122156143188},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.6910320520401001},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5935871601104736},{"id":"https://openalex.org/keywords/structural-bioinformatics","display_name":"Structural bioinformatics","score":0.5304742455482483},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4708064794540405},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.44391611218452454},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42368248105049133},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37274599075317383},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.31601008772850037},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26866623759269714},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.23129749298095703},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1806798279285431},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.13660165667533875},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.05635598301887512},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.054492175579071045}],"concepts":[{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.7410122156143188},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.6910320520401001},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5935871601104736},{"id":"https://openalex.org/C69131567","wikidata":"https://www.wikidata.org/wiki/Q2068215","display_name":"Structural bioinformatics","level":3,"score":0.5304742455482483},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4708064794540405},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.44391611218452454},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42368248105049133},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37274599075317383},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.31601008772850037},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26866623759269714},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.23129749298095703},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1806798279285431},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.13660165667533875},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.05635598301887512},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.054492175579071045},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbr011","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbr011","pdf_url":"https://academic.oup.com/bib/article-pdf/12/4/312/663355/bbr011.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21441562","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21441562","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bib/bbr011","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbr011","pdf_url":"https://academic.oup.com/bib/article-pdf/12/4/312/663355/bbr011.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2125200271.pdf","grobid_xml":"https://content.openalex.org/works/W2125200271.grobid-xml"},"referenced_works_count":107,"referenced_works":["https://openalex.org/W22857079","https://openalex.org/W96975153","https://openalex.org/W1549626617","https://openalex.org/W1587470262","https://openalex.org/W1968531209","https://openalex.org/W1968682237","https://openalex.org/W1969370763","https://openalex.org/W1969657447","https://openalex.org/W1970833175","https://openalex.org/W1971213794","https://openalex.org/W1971359651","https://openalex.org/W1972821149","https://openalex.org/W1974885771","https://openalex.org/W1976874178","https://openalex.org/W1979414133","https://openalex.org/W1979914800","https://openalex.org/W1980047995","https://openalex.org/W1984673823","https://openalex.org/W1987349557","https://openalex.org/W1991646180","https://openalex.org/W1994658365","https://openalex.org/W1996239270","https://openalex.org/W1998848097","https://openalex.org/W2003656858","https://openalex.org/W2006333161","https://openalex.org/W2008518939","https://openalex.org/W2008731781","https://openalex.org/W2009313526","https://openalex.org/W2015147525","https://openalex.org/W2015393683","https://openalex.org/W2017248899","https://openalex.org/W2019375534","https://openalex.org/W2021068722","https://openalex.org/W2033591223","https://openalex.org/W2037022423","https://openalex.org/W2039745597","https://openalex.org/W2040595595","https://openalex.org/W2042711932","https://openalex.org/W2044098591","https://openalex.org/W2044172420","https://openalex.org/W2049334204","https://openalex.org/W2055308071","https://openalex.org/W2059006070","https://openalex.org/W2062941476","https://openalex.org/W2068351024","https://openalex.org/W2068541511","https://openalex.org/W2069676201","https://openalex.org/W2070116427","https://openalex.org/W2071973715","https://openalex.org/W2074192927","https://openalex.org/W2076664894","https://openalex.org/W2076764146","https://openalex.org/W2081526643","https://openalex.org/W2083042679","https://openalex.org/W2085398335","https://openalex.org/W2085833518","https://openalex.org/W2086380285","https://openalex.org/W2087744067","https://openalex.org/W2091262011","https://openalex.org/W2093313266","https://openalex.org/W2094018942","https://openalex.org/W2094791588","https://openalex.org/W2096814387","https://openalex.org/W2096864392","https://openalex.org/W2098931556","https://openalex.org/W2101175089","https://openalex.org/W2103935383","https://openalex.org/W2104916446","https://openalex.org/W2108069034","https://openalex.org/W2108155748","https://openalex.org/W2109331600","https://openalex.org/W2110591305","https://openalex.org/W2111076982","https://openalex.org/W2112109058","https://openalex.org/W2118200955","https://openalex.org/W2120850582","https://openalex.org/W2120898782","https://openalex.org/W2121175754","https://openalex.org/W2123032501","https://openalex.org/W2126103104","https://openalex.org/W2127067710","https://openalex.org/W2130479394","https://openalex.org/W2131736388","https://openalex.org/W2133114049","https://openalex.org/W2136750916","https://openalex.org/W2138357005","https://openalex.org/W2138512826","https://openalex.org/W2138770756","https://openalex.org/W2139516171","https://openalex.org/W2140564438","https://openalex.org/W2142572836","https://openalex.org/W2144769066","https://openalex.org/W2150065588","https://openalex.org/W2150472473","https://openalex.org/W2151084213","https://openalex.org/W2152844725","https://openalex.org/W2153251136","https://openalex.org/W2154896031","https://openalex.org/W2156077095","https://openalex.org/W2159306692","https://openalex.org/W2160400421","https://openalex.org/W2170146596","https://openalex.org/W2170441710","https://openalex.org/W2283151873","https://openalex.org/W2316160054","https://openalex.org/W2322154235","https://openalex.org/W4242853598"],"related_works":["https://openalex.org/W3032892710","https://openalex.org/W4281726759","https://openalex.org/W3048847289","https://openalex.org/W2139423368","https://openalex.org/W2143411881","https://openalex.org/W2518384400","https://openalex.org/W4282967338","https://openalex.org/W2613447735","https://openalex.org/W2765741102","https://openalex.org/W4307501484"],"abstract_inverted_index":{"Developing":[0],"a":[1,6],"drug":[2],"de":[3],"novo":[4],"is":[5,24],"laborious":[7],"and":[8,26,42,52,63],"costly":[9],"endeavor.":[10],"Thus,":[11],"the":[12,19,34,67],"repositioning":[13,32],"of":[14,21,37,40,66],"already":[15],"approved":[16],"drugs":[17],"for":[18],"treatment":[20],"new":[22,43],"diseases":[23],"promising":[25],"valuable.":[27],"One":[28],"computational":[29,48],"approach":[30],"to":[31,50],"exploits":[33],"structural":[35],"similarity":[36],"binding":[38,54],"sites":[39],"known":[41],"targets.":[44],"Here,":[45],"we":[46],"review":[47,57],"methods":[49],"represent":[51],"align":[53],"sites.":[55],"We":[56],"available":[58],"tools,":[59],"present":[60],"success":[61],"stories":[62],"discuss":[64],"limits":[65],"approach.":[68]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":8},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":19},{"year":2018,"cited_by_count":13},{"year":2017,"cited_by_count":12},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":13},{"year":2014,"cited_by_count":14},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":19}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
