{"id":"https://openalex.org/W2096814387","doi":"https://doi.org/10.1093/bib/bbn035","title":"Literature mining in support of drug discovery","display_name":"Literature mining in support of drug discovery","publication_year":2008,"publication_date":"2008-07-11","ids":{"openalex":"https://openalex.org/W2096814387","doi":"https://doi.org/10.1093/bib/bbn035","mag":"2096814387","pmid":"https://pubmed.ncbi.nlm.nih.gov/18820304"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbn035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbn035","pdf_url":"https://academic.oup.com/bib/article-pdf/9/6/479/598781/bbn035.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://academic.oup.com/bib/article-pdf/9/6/479/598781/bbn035.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033246609","display_name":"Pankaj Agarwal","orcid":"https://orcid.org/0000-0002-4165-9990"},"institutions":[{"id":"https://openalex.org/I188950975","display_name":"GlaxoSmithKline (United Kingdom)","ror":"https://ror.org/01xsqw823","country_code":"GB","type":"company","lineage":["https://openalex.org/I188950975"]},{"id":"https://openalex.org/I4210114143","display_name":"GlaxoSmithKline (United States)","ror":"https://ror.org/025vn3989","country_code":"US","type":"company","lineage":["https://openalex.org/I188950975","https://openalex.org/I4210114143"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"P. Agarwal","raw_affiliation_strings":["GlaxoSmithKline R&D, 709 Swedeland Road, UW2230, King of Prussia, PA 19406. Pankaj.Agarwal@gsk.com","GlaxoSmithKline R&D, 709 Swedeland Road, UW2230, King of Prussia, PA 19406"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GlaxoSmithKline R&D, 709 Swedeland Road, UW2230, King of Prussia, PA 19406. Pankaj.Agarwal@gsk.com","institution_ids":["https://openalex.org/I4210114143"]},{"raw_affiliation_string":"GlaxoSmithKline R&D, 709 Swedeland Road, UW2230, King of Prussia, PA 19406","institution_ids":["https://openalex.org/I188950975"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010900550","display_name":"David B. Searls","orcid":"https://orcid.org/0000-0001-7840-8274"},"institutions":[{"id":"https://openalex.org/I188950975","display_name":"GlaxoSmithKline (United Kingdom)","ror":"https://ror.org/01xsqw823","country_code":"GB","type":"company","lineage":["https://openalex.org/I188950975"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"D. B. Searls","raw_affiliation_strings":["GlaxoSmithKline R&D, 709 Swedeland Road, UW2230, King of Prussia, PA 19406"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"GlaxoSmithKline R&D, 709 Swedeland Road, UW2230, King of Prussia, PA 19406","institution_ids":["https://openalex.org/I188950975"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":4.1615,"has_fulltext":true,"cited_by_count":86,"citation_normalized_percentile":{"value":0.94878991,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"9","issue":"6","first_page":"479","last_page":"492"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9803000092506409,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6924795508384705},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6675763726234436},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.6559231877326965},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5557224750518799},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5038596987724304},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.4510481059551239},{"id":"https://openalex.org/keywords/scientific-literature","display_name":"Scientific literature","score":0.41467636823654175},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.24807924032211304},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1513560712337494},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.07465419173240662},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.06865796446800232}],"concepts":[{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6924795508384705},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6675763726234436},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.6559231877326965},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5557224750518799},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5038596987724304},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.4510481059551239},{"id":"https://openalex.org/C2781083858","wikidata":"https://www.wikidata.org/wiki/Q17327049","display_name":"Scientific literature","level":2,"score":0.41467636823654175},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.24807924032211304},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1513560712337494},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.07465419173240662},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.06865796446800232},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbn035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbn035","pdf_url":"https://academic.oup.com/bib/article-pdf/9/6/479/598781/bbn035.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18820304","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18820304","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bib/bbn035","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbn035","pdf_url":"https://academic.oup.com/bib/article-pdf/9/6/479/598781/bbn035.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.41999998688697815}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096814387.pdf","grobid_xml":"https://content.openalex.org/works/W2096814387.grobid-xml"},"referenced_works_count":103,"referenced_works":["https://openalex.org/W79002519","https://openalex.org/W186166080","https://openalex.org/W238734946","https://openalex.org/W1498579665","https://openalex.org/W1512170015","https://openalex.org/W1544009106","https://openalex.org/W1545364235","https://openalex.org/W1552716293","https://openalex.org/W1553011358","https://openalex.org/W1569838877","https://openalex.org/W1592870675","https://openalex.org/W1623698862","https://openalex.org/W1747861911","https://openalex.org/W1964517500","https://openalex.org/W1967494780","https://openalex.org/W1973530949","https://openalex.org/W1976316416","https://openalex.org/W1978744367","https://openalex.org/W1980395095","https://openalex.org/W1992381544","https://openalex.org/W1994306321","https://openalex.org/W1997787819","https://openalex.org/W2004941053","https://openalex.org/W2006566482","https://openalex.org/W2009685503","https://openalex.org/W2011138994","https://openalex.org/W2011726136","https://openalex.org/W2014358138","https://openalex.org/W2014849717","https://openalex.org/W2016398181","https://openalex.org/W2017252311","https://openalex.org/W2022609188","https://openalex.org/W2023736097","https://openalex.org/W2027903554","https://openalex.org/W2036370897","https://openalex.org/W2037442572","https://openalex.org/W2040022066","https://openalex.org/W2042377056","https://openalex.org/W2051871732","https://openalex.org/W2053142758","https://openalex.org/W2053673723","https://openalex.org/W2059106947","https://openalex.org/W2062163602","https://openalex.org/W2067096102","https://openalex.org/W2076282513","https://openalex.org/W2076448934","https://openalex.org/W2079691202","https://openalex.org/W2082536669","https://openalex.org/W2086300802","https://openalex.org/W2089013398","https://openalex.org/W2090112736","https://openalex.org/W2094591616","https://openalex.org/W2096525273","https://openalex.org/W2097036913","https://openalex.org/W2098201295","https://openalex.org/W2099188065","https://openalex.org/W2099369363","https://openalex.org/W2099768941","https://openalex.org/W2103397879","https://openalex.org/W2103612359","https://openalex.org/W2103776834","https://openalex.org/W2104108767","https://openalex.org/W2107005506","https://openalex.org/W2108238592","https://openalex.org/W2109179237","https://openalex.org/W2113202266","https://openalex.org/W2118096205","https://openalex.org/W2120109270","https://openalex.org/W2123112337","https://openalex.org/W2123151657","https://openalex.org/W2126276057","https://openalex.org/W2126411976","https://openalex.org/W2131449610","https://openalex.org/W2132744551","https://openalex.org/W2132773777","https://openalex.org/W2132784310","https://openalex.org/W2133993935","https://openalex.org/W2136181737","https://openalex.org/W2138675401","https://openalex.org/W2138689719","https://openalex.org/W2140407633","https://openalex.org/W2147152072","https://openalex.org/W2148395543","https://openalex.org/W2149184178","https://openalex.org/W2149942697","https://openalex.org/W2152317795","https://openalex.org/W2153508286","https://openalex.org/W2157089897","https://openalex.org/W2157272674","https://openalex.org/W2159203162","https://openalex.org/W2159583324","https://openalex.org/W2161905890","https://openalex.org/W2162243457","https://openalex.org/W2164883151","https://openalex.org/W2165125496","https://openalex.org/W2168866167","https://openalex.org/W2168905447","https://openalex.org/W2169826465","https://openalex.org/W2290195878","https://openalex.org/W2411788143","https://openalex.org/W2917431650","https://openalex.org/W4239678514","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2480711475","https://openalex.org/W2061997414","https://openalex.org/W93075631","https://openalex.org/W3123614446","https://openalex.org/W3005434123","https://openalex.org/W2126703991","https://openalex.org/W2610897791","https://openalex.org/W1481711077","https://openalex.org/W2076251662","https://openalex.org/W4366463707"],"abstract_inverted_index":{"The":[0],"drug":[1,33,85],"discovery":[2,34],"enterprise":[3],"provides":[4,72],"strong":[5],"drivers":[6],"for":[7,53],"data":[8,23,56],"integration.":[9],"While":[10],"attention":[11],"in":[12],"this":[13],"arena":[14],"has":[15],"tended":[16],"to":[17,32,47,78,84],"focus":[18],"on":[19],"integration":[20],"of":[21,44,64,76,93],"primary":[22],"from":[24],"omics":[25],"and":[26,35,50,57,67,87],"other":[27,61],"large":[28],"platform":[29],"technologies":[30],"contributing":[31],"development,":[36],"the":[37],"scientific":[38],"literature":[39,79],"remains":[40],"a":[41,73,94],"major":[42],"source":[43],"information":[45],"valuable":[46],"pharmaceutical":[48],"enterprises,":[49],"therefore":[51],"tools":[52],"mining":[54,80],"such":[55],"integrating":[58],"it":[59],"with":[60],"sources":[62],"are":[63],"vital":[65],"interest":[66],"economic":[68],"impact.":[69],"This":[70],"review":[71],"brief":[74],"overview":[75],"approaches":[77],"as":[81],"they":[82],"relate":[83],"discovery,":[86],"offers":[88],"an":[89,101],"illustrative":[90],"case":[91],"study":[92],"'lightweight'":[95],"approach":[96],"we":[97],"have":[98],"implemented":[99],"within":[100],"industrial":[102],"context.":[103]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":12},{"year":2012,"cited_by_count":6}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
