{"id":"https://openalex.org/W2100434585","doi":"https://doi.org/10.1093/bib/bbn029","title":"Experience using web services for biological sequence analysis","display_name":"Experience using web services for biological sequence analysis","publication_year":2008,"publication_date":"2008-07-11","ids":{"openalex":"https://openalex.org/W2100434585","doi":"https://doi.org/10.1093/bib/bbn029","mag":"2100434585","pmid":"https://pubmed.ncbi.nlm.nih.gov/18621748"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbn029","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbn029","pdf_url":"https://academic.oup.com/bib/article-pdf/9/6/493/597352/bbn029.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/9/6/493/597352/bbn029.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069082993","display_name":"Heinz Stockinger","orcid":"https://orcid.org/0000-0003-4666-7719"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"H. Stockinger","raw_affiliation_strings":["Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland. Heinz.Stockinger@isb-sib.ch","Swiss Institute of Bioinformatics, Vital-IT group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland. Heinz.Stockinger@isb-sib.ch","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016694329","display_name":"Teresa K. Attwood","orcid":"https://orcid.org/0000-0003-2409-4235"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]},{"id":"https://openalex.org/I4210153232","display_name":"Associates in Neurology","ror":"https://ror.org/0517a1s55","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210153232"]}],"countries":["CH","IN","PK","US"],"is_corresponding":false,"raw_author_name":"T. Attwood","raw_affiliation_strings":["Teresa Attwood is a professor in the faculty of Life Sciences at the University of Manchester. Her research lies in the field of bioinformatics, specifically in the area of protein sequence analysis","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Teresa Attwood is a professor in the faculty of Life Sciences at the University of Manchester. Her research lies in the field of bioinformatics, specifically in the area of protein sequence analysis","institution_ids":["https://openalex.org/I4210153232"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082974776","display_name":"Shahid N. Chohan","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"S. N. Chohan","raw_affiliation_strings":["Shahid Nadeem Chohan is the chair person of the Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shahid Nadeem Chohan is the chair person of the Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065058352","display_name":"Rick Cote","orcid":"https://orcid.org/0000-0002-1573-6526"},"institutions":[{"id":"https://openalex.org/I114772536","display_name":"Software Engineering Institute","ror":"https://ror.org/01xqjjn94","country_code":"US","type":"facility","lineage":["https://openalex.org/I114772536","https://openalex.org/I74973139"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK","US"],"is_corresponding":false,"raw_author_name":"R. Cote","raw_affiliation_strings":["Richard C\u00f4t\u00e9 is a software engineer at the European Bioinformatics Institute where he develops software for various projects related to sequence annotation","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Richard C\u00f4t\u00e9 is a software engineer at the European Bioinformatics Institute where he develops software for various projects related to sequence annotation","institution_ids":["https://openalex.org/I114772536"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028454093","display_name":"Philippe Cudr\u00e9-Mauroux","orcid":"https://orcid.org/0000-0003-2588-4212"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"P. Cudre-Mauroux","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009886872","display_name":"Laurent Falquet","orcid":"https://orcid.org/0000-0001-8102-7579"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"L. Falquet","raw_affiliation_strings":["Laurent Falquet is a bioinformatician at the Swiss Institute of Bioinformatics. He manages the Swiss EMBnet node as well as training and user support","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laurent Falquet is a bioinformatician at the Swiss Institute of Bioinformatics. He manages the Swiss EMBnet node as well as training and user support","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062741293","display_name":"Pedro Fernandes","orcid":"https://orcid.org/0000-0003-2124-0241"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"P. Fernandes","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104045098","display_name":"ROBERT FINN","orcid":"https://orcid.org/0000-0001-8626-2148"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]},{"id":"https://openalex.org/I4210158820","display_name":"'s Heeren Loo","ror":"https://ror.org/05mf3wf75","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I4210158820"]}],"countries":["CH","IN","NL","PK"],"is_corresponding":false,"raw_author_name":"R. D. Finn","raw_affiliation_strings":["Robert D. Finn works at the Sanger Institute where he is project leader of the PFAM project","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Robert D. Finn works at the Sanger Institute where he is project leader of the PFAM project","institution_ids":["https://openalex.org/I4210158820"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045222260","display_name":"Taavi Hupponen","orcid":null},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"T. Hupponen","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084707312","display_name":"Eija Korpelainen","orcid":"https://orcid.org/0000-0002-4406-5602"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"E. Korpelainen","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025326086","display_name":"Alberto Labarga","orcid":"https://orcid.org/0000-0001-6781-893X"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"A. Labarga","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032302491","display_name":"Aur\u00e9lie Laugraud","orcid":"https://orcid.org/0000-0002-5606-3428"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"A. Laugraud","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082555832","display_name":"T\u00e2nia Lima","orcid":"https://orcid.org/0000-0001-7317-6697"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"T. Lima","raw_affiliation_strings":["Tania Lima is a biologist and annotator of Swiss-Prot within the Swiss Institute of Bioinformatics","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Tania Lima is a biologist and annotator of Swiss-Prot within the Swiss Institute of Bioinformatics","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025850900","display_name":"Evangelos Pafilis","orcid":"https://orcid.org/0000-0001-5079-0125"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"E. Pafilis","raw_affiliation_strings":["Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006006798","display_name":"Marco Pagni","orcid":"https://orcid.org/0000-0001-9292-9463"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"M. Pagni","raw_affiliation_strings":["Marco Pagni is a bioinformatician at the Swiss Institute of Bioinformatics where he works on topics related to sequence analysis, automated annotation, database design and management and large-scale computation","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Marco Pagni is a bioinformatician at the Swiss Institute of Bioinformatics where he works on topics related to sequence analysis, automated annotation, database design and management and large-scale computation","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081272754","display_name":"Steve Pettifer","orcid":"https://orcid.org/0000-0002-1809-5621"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210124969","display_name":"Humanitarian Institute","ror":"https://ror.org/02xe1zz23","country_code":"RU","type":"education","lineage":["https://openalex.org/I4210124969"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK","RU"],"is_corresponding":false,"raw_author_name":"S. Pettifer","raw_affiliation_strings":["Steve Pettifer is a lecturer in computer science at the University of Manchester, specialised in graphics, visualisation and human computer interfaces","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Steve Pettifer is a lecturer in computer science at the University of Manchester, specialised in graphics, visualisation and human computer interfaces","institution_ids":["https://openalex.org/I4210124969"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058953884","display_name":"Isabelle Phan","orcid":"https://orcid.org/0000-0001-6873-3401"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"I. Phan","raw_affiliation_strings":["Isabelle Phan is a bioinformatician at the Swiss Institute of Bioinformatics where she works on Swiss-Prot related topics","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Isabelle Phan is a bioinformatician at the Swiss Institute of Bioinformatics where she works on Swiss-Prot related topics","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091418824","display_name":"Nazneen Rahman","orcid":"https://orcid.org/0000-0003-4376-0440"},"institutions":[{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"nonprofit","lineage":["https://openalex.org/I12708293"]},{"id":"https://openalex.org/I16076960","display_name":"COMSATS University Islamabad","ror":"https://ror.org/00nqqvk19","country_code":"PK","type":"education","lineage":["https://openalex.org/I16076960"]},{"id":"https://openalex.org/I4210148697","display_name":"Institute of Bioinformatics","ror":"https://ror.org/04hqfvm50","country_code":"IN","type":"nonprofit","lineage":["https://openalex.org/I4210148697"]}],"countries":["CH","IN","PK"],"is_corresponding":false,"raw_author_name":"N. Rahman","raw_affiliation_strings":["Nazim Rahman is a bioinformatician at the Swiss Institute of Bioinformatics","Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","Institute of Bioinformatics","Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Nazim Rahman is a bioinformatician at the Swiss Institute of Bioinformatics","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"Department of Biosciences, COMSATS Institute of Information Technology, Islamabad","institution_ids":["https://openalex.org/I16076960"]},{"raw_affiliation_string":"Institute of Bioinformatics","institution_ids":["https://openalex.org/I4210148697"]},{"raw_affiliation_string":"Swiss Institute of Bioinformatics, Vital-IT Group, Lausanne, Switzerland","institution_ids":["https://openalex.org/I12708293"]}]}],"institutions":[],"countries_distinct_count":6,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":14.3892,"has_fulltext":true,"cited_by_count":28,"citation_normalized_percentile":{"value":0.98497305,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"9","issue":"6","first_page":"493","last_page":"505"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7756553888320923},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.7134472131729126},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.7012447714805603},{"id":"https://openalex.org/keywords/soap","display_name":"SOAP","score":0.6073122620582581},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5920560956001282},{"id":"https://openalex.org/keywords/web-standards","display_name":"Web standards","score":0.5818964838981628},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.5125765204429626},{"id":"https://openalex.org/keywords/social-semantic-web","display_name":"Social Semantic Web","score":0.4293321669101715},{"id":"https://openalex.org/keywords/data-web","display_name":"Data Web","score":0.42878878116607666},{"id":"https://openalex.org/keywords/ws-policy","display_name":"WS-Policy","score":0.42694586515426636},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3723839521408081},{"id":"https://openalex.org/keywords/web-development","display_name":"Web development","score":0.32432252168655396},{"id":"https://openalex.org/keywords/web-application-security","display_name":"Web application security","score":0.25568270683288574}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7756553888320923},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.7134472131729126},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.7012447714805603},{"id":"https://openalex.org/C17881449","wikidata":"https://www.wikidata.org/wiki/Q189620","display_name":"SOAP","level":2,"score":0.6073122620582581},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5920560956001282},{"id":"https://openalex.org/C182321512","wikidata":"https://www.wikidata.org/wiki/Q1153289","display_name":"Web standards","level":3,"score":0.5818964838981628},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.5125765204429626},{"id":"https://openalex.org/C534406577","wikidata":"https://www.wikidata.org/wiki/Q7550843","display_name":"Social Semantic Web","level":3,"score":0.4293321669101715},{"id":"https://openalex.org/C162005631","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Data Web","level":3,"score":0.42878878116607666},{"id":"https://openalex.org/C190515685","wikidata":"https://www.wikidata.org/wiki/Q749179","display_name":"WS-Policy","level":5,"score":0.42694586515426636},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3723839521408081},{"id":"https://openalex.org/C79373723","wikidata":"https://www.wikidata.org/wiki/Q386275","display_name":"Web development","level":3,"score":0.32432252168655396},{"id":"https://openalex.org/C59241245","wikidata":"https://www.wikidata.org/wiki/Q4781497","display_name":"Web application security","level":4,"score":0.25568270683288574},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017421","descriptor_name":"Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbn029","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbn029","pdf_url":"https://academic.oup.com/bib/article-pdf/9/6/493/597352/bbn029.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18621748","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18621748","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/82794228-f44d-4b72-b26b-f9a178c9c3ab","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/82794228-f44d-4b72-b26b-f9a178c9c3ab","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Stockinger, H, Attwood, T, Chohan, S N, C\u00f4t\u00e9, R, Cudr\u00e9-Mauroux, P, Falquet, L, Fernandes, P, Finn, R D, Hupponen, T, Korpelainen, E, Labarga, A, Laugraud, A, Lima, T, Pafilis, E, Pagni, M, Pettifer, S, Phan, I & Rahman, N 2008, 'Experience using web services for biological sequence analysis', Briefings in Bioinformatics, vol. 9, no. 6, pp. 493-505. https://doi.org/10.1093/bib/bbn029","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2989672","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2989672","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/82794228-f44d-4b72-b26b-f9a178c9c3ab","is_oa":false,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/experience-using-web-services-for-biological-sequence-analysis(82794228-f44d-4b72-b26b-f9a178c9c3ab).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Stockinger, H, Attwood, T, Chohan, S N, C\u00f4t\u00e9, R, Cudr\u00e9-Mauroux, P, Falquet, L, Fernandes, P, Finn, R D, Hupponen, T, Korpelainen, E, Labarga, A, Laugraud, A, Lima, T, Pafilis, E, Pagni, M, Pettifer, S, Phan, I & Rahman, N 2008, 'Experience using web services for biological sequence analysis', Briefings in Bioinformatics, vol. 9, no. 6, pp. 493-505. https://doi.org/10.1093/bib/bbn029","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbn029","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbn029","pdf_url":"https://academic.oup.com/bib/article-pdf/9/6/493/597352/bbn029.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2100434585.pdf","grobid_xml":"https://content.openalex.org/works/W2100434585.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1518754760","https://openalex.org/W1871852719","https://openalex.org/W1980160222","https://openalex.org/W1981095206","https://openalex.org/W1996902131","https://openalex.org/W2001291669","https://openalex.org/W2014719716","https://openalex.org/W2016758618","https://openalex.org/W2025002290","https://openalex.org/W2032623878","https://openalex.org/W2072229457","https://openalex.org/W2100990314","https://openalex.org/W2102789902","https://openalex.org/W2109411756","https://openalex.org/W2109615707","https://openalex.org/W2119896671","https://openalex.org/W2125745905","https://openalex.org/W2137239190","https://openalex.org/W2141824507","https://openalex.org/W2141885858","https://openalex.org/W2143020011","https://openalex.org/W2147231162","https://openalex.org/W2156206665","https://openalex.org/W2158304452","https://openalex.org/W2161062388","https://openalex.org/W2168103533","https://openalex.org/W2168514491","https://openalex.org/W2310178270","https://openalex.org/W4210323379","https://openalex.org/W4211083314"],"related_works":["https://openalex.org/W2279098064","https://openalex.org/W2111508211","https://openalex.org/W2363068772","https://openalex.org/W2183626957","https://openalex.org/W2059445287","https://openalex.org/W2113445341","https://openalex.org/W2069569467","https://openalex.org/W4297019390","https://openalex.org/W2492343894","https://openalex.org/W2287175183"],"abstract_inverted_index":{"Programmatic":[0],"access":[1],"to":[2,17],"data":[3,82],"and":[4,33,35,47,76,80],"tools":[5],"through":[6],"the":[7,26,42,52],"web":[8,11,49,87],"using":[9,48],"so-called":[10],"services":[12,50,88],"has":[13],"an":[14],"important":[15],"role":[16],"play":[18],"in":[19,51],"bioinformatics.":[20],"In":[21],"this":[22],"article,":[23],"we":[24],"discuss":[25],"most":[27],"popular":[28],"approaches":[29,63],"based":[30],"on":[31],"SOAP/WS-I":[32],"REST":[34],"describe":[36],"our,":[37],"a":[38],"cross":[39],"section":[40],"of":[41,54],"community,":[43],"experiences":[44],"with":[45,85],"providing":[46],"context":[53],"biological":[55],"sequence":[56],"analysis.":[57],"We":[58],"briefly":[59],"review":[60],"main":[61],"technological":[62],"as":[64,66],"well":[65],"best":[67],"practice":[68],"hints":[69],"that":[70],"are":[71,89],"useful":[72],"for":[73],"both":[74],"users":[75],"developers.":[77],"Finally,":[78],"syntactic":[79],"semantic":[81],"integration":[83],"issues":[84],"multiple":[86],"discussed.":[90]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
