{"id":"https://openalex.org/W2086886740","doi":"https://doi.org/10.1093/bib/bbn022","title":"Biodiversity informatics: the challenge of linking data and the role of shared identifiers","display_name":"Biodiversity informatics: the challenge of linking data and the role of shared identifiers","publication_year":2008,"publication_date":"2008-04-24","ids":{"openalex":"https://openalex.org/W2086886740","doi":"https://doi.org/10.1093/bib/bbn022","mag":"2086886740","pmid":"https://pubmed.ncbi.nlm.nih.gov/18445641"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbn022","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbn022","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068055706","display_name":"Roderic Page","orcid":"https://orcid.org/0000-0002-7101-9767"},"institutions":[{"id":"https://openalex.org/I7882870","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53","country_code":"GB","type":"education","lineage":["https://openalex.org/I7882870"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"R. D. M. Page","raw_affiliation_strings":["Division of Environmental and Evolutional Biology, Institute of Biomedical and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK. r.page@bio.gla.ac.uk","Division of Environmental and Evolutional Biology, Institute of Biomedical and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Environmental and Evolutional Biology, Institute of Biomedical and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK. r.page@bio.gla.ac.uk","institution_ids":["https://openalex.org/I7882870"]},{"raw_affiliation_string":"Division of Environmental and Evolutional Biology, Institute of Biomedical and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK","institution_ids":["https://openalex.org/I7882870"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5068055706"],"corresponding_institution_ids":["https://openalex.org/I7882870"],"apc_list":{"value":3885,"currency":"USD","value_usd":3885},"apc_paid":null,"fwci":7.8271,"has_fulltext":false,"cited_by_count":111,"citation_normalized_percentile":{"value":0.97685551,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"9","issue":"5","first_page":"345","last_page":"354"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12640","display_name":"Environmental DNA in Biodiversity Studies","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10487","display_name":"Plant and animal studies","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.9247497320175171},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.6743596792221069},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.593584418296814},{"id":"https://openalex.org/keywords/unique-identifier","display_name":"Unique identifier","score":0.5234997868537903},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.4668850004673004},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.45903491973876953},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4154145121574402},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.38049501180648804},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.34083178639411926},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13296952843666077}],"concepts":[{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.9247497320175171},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.6743596792221069},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.593584418296814},{"id":"https://openalex.org/C119839945","wikidata":"https://www.wikidata.org/wiki/Q6545185","display_name":"Unique identifier","level":3,"score":0.5234997868537903},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.4668850004673004},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.45903491973876953},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4154145121574402},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.38049501180648804},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.34083178639411926},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13296952843666077},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/bib/bbn022","is_oa":false,"landing_page_url":"https://doi.org/10.1093/bib/bbn022","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:18445641","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18445641","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:aura.abdn.ac.uk:2164/2834","is_oa":false,"landing_page_url":"http://hdl.handle.net/2164/2834","pdf_url":null,"source":{"id":"https://openalex.org/S4306400966","display_name":"Aberdeen University Research Archive (Aberdeen University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I195460627","host_organization_name":"University of Aberdeen","host_organization_lineage":["https://openalex.org/I195460627"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Patent"},{"id":"pmh:oai:aura.abdn.ac.uk:2164/2837","is_oa":false,"landing_page_url":"http://www.abdn.ac.uk","pdf_url":null,"source":{"id":"https://openalex.org/S4306400966","display_name":"Aberdeen University Research Archive (Aberdeen University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I195460627","host_organization_name":"University of Aberdeen","host_organization_lineage":["https://openalex.org/I195460627"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book"},{"id":"pmh:oai:eprints.gla.ac.uk:41538","is_oa":false,"landing_page_url":"https://eprints.gla.ac.uk/41538/","pdf_url":null,"source":{"id":"https://openalex.org/S4210235606","display_name":"ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam)","issn_l":"2622-8912","issn":["2622-8912","2622-8920"],"is_oa":false,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Articles"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4699999988079071,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G8938397741","display_name":null,"funder_award_id":"BB/C004310/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W210390897","https://openalex.org/W1430534423","https://openalex.org/W1530608603","https://openalex.org/W1854214752","https://openalex.org/W1967383767","https://openalex.org/W2004499212","https://openalex.org/W2045050245","https://openalex.org/W2055043387","https://openalex.org/W2063007776","https://openalex.org/W2082587083","https://openalex.org/W2095942334","https://openalex.org/W2117077912","https://openalex.org/W2133964953","https://openalex.org/W2135394410","https://openalex.org/W2136199500","https://openalex.org/W2138621811","https://openalex.org/W2138850128","https://openalex.org/W2152644728","https://openalex.org/W2156682604","https://openalex.org/W2156892696","https://openalex.org/W2161661053","https://openalex.org/W2169752264","https://openalex.org/W2174637581","https://openalex.org/W2208492110","https://openalex.org/W4236236547"],"related_works":["https://openalex.org/W2158231814","https://openalex.org/W2413568490","https://openalex.org/W1913624564","https://openalex.org/W3130054399","https://openalex.org/W4301062032","https://openalex.org/W2343500026","https://openalex.org/W2319837024","https://openalex.org/W2033159440","https://openalex.org/W2390627310","https://openalex.org/W2413664130"],"abstract_inverted_index":{"A":[0],"major":[1],"challenge":[2],"facing":[3],"biodiversity":[4,113],"informatics":[5],"is":[6,62,120],"integrating":[7],"data":[8],"stored":[9],"in":[10,27,58,90],"widely":[11],"distributed":[12],"databases.":[13,29,92,114],"Initial":[14],"efforts":[15],"have":[16,33],"relied":[17],"on":[18,112],"taxonomic":[19,31,48,67],"names":[20,32],"as":[21,35,78,132],"the":[22,44,72,103,108,143],"shared":[23,129],"identifier":[24],"linking":[25],"records":[26],"different":[28,91],"However,":[30],"limitations":[34],"identifiers,":[36,76],"being":[37],"neither":[38],"stable":[39],"nor":[40],"globally":[41,127],"unique,":[42,128],"and":[43,49,81,125,137,142],"pace":[45],"of":[46,56,74,95,110,145],"molecular":[47],"phylogenetic":[50],"research":[51],"means":[52],"that":[53,147],"a":[54,121],"lot":[55],"information":[57],"public":[59],"sequence":[60],"databases":[61],"not":[63],"linked":[64],"to":[65,85,106,117,123],"formal":[66],"names.":[68],"This":[69],"review":[70],"explores":[71],"use":[73],"other":[75],"such":[77],"specimen":[79],"codes":[80],"GenBank":[82],"accession":[83],"numbers,":[84],"link":[86,148],"otherwise":[87],"disconnected":[88],"facts":[89],"The":[93,115],"structure":[94],"these":[96],"links":[97],"can":[98],"also":[99],"be":[100],"exploited":[101],"using":[102],"PageRank":[104],"algorithm":[105],"rank":[107],"results":[109],"searches":[111],"key":[116],"rich":[118],"integration":[119],"commitment":[122],"deploy":[124],"reuse":[126],"identifiers":[130],"[such":[131],"Digital":[133],"Object":[134],"Identifiers":[135,140],"(DOIs)":[136],"Life":[138],"Science":[139],"(LSIDs)],":[141],"implementation":[144],"services":[146],"those":[149],"identifiers.":[150]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":8}],"updated_date":"2026-08-27T14:10:00.468798","created_date":"2025-10-10T00:00:00"}
