{"id":"https://openalex.org/W2138059820","doi":"https://doi.org/10.1093/bib/bbl039","title":"Representing, storing and accessing molecular interaction data: a review of models and tools","display_name":"Representing, storing and accessing molecular interaction data: a review of models and tools","publication_year":2006,"publication_date":"2006-09-26","ids":{"openalex":"https://openalex.org/W2138059820","doi":"https://doi.org/10.1093/bib/bbl039","mag":"2138059820","pmid":"https://pubmed.ncbi.nlm.nih.gov/17132622"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbl039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbl039","pdf_url":"https://academic.oup.com/bib/article-pdf/7/4/331/448904/bbl039.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://academic.oup.com/bib/article-pdf/7/4/331/448904/bbl039.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088833677","display_name":"Lena Str\u00f6mb\u00e4ck","orcid":"https://orcid.org/0000-0001-5517-2940"},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"L. Stromback","raw_affiliation_strings":["Department of Computer and Information Science, Link\u00f6pings Universitet, Sweden. lestr@ida.liu.se","Dept. of Computer and Information Science, Link\u00f6pings universitet, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science, Link\u00f6pings Universitet, Sweden. lestr@ida.liu.se","institution_ids":["https://openalex.org/I102134673"]},{"raw_affiliation_string":"Dept. of Computer and Information Science, Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066367939","display_name":"Vaida Jakonien\u00e9","orcid":null},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]},{"id":"https://openalex.org/I172574986","display_name":"Kaunas University of Technology","ror":"https://ror.org/01me6gb93","country_code":"LT","type":"education","lineage":["https://openalex.org/I172574986"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE","LT","SE"],"is_corresponding":false,"raw_author_name":"V. Jakoniene","raw_affiliation_strings":["Sweden","Link\u00f6pings universitet and MSc degrees in mathematics and computer science from KU Leuven, Belgium","Link\u00f6pings universitet, Sweden","Kaunas University of Technology, Lithuania","Department of Computer and Information Science Link\u00f6pings universitet, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sweden","institution_ids":[]},{"raw_affiliation_string":"Link\u00f6pings universitet and MSc degrees in mathematics and computer science from KU Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]},{"raw_affiliation_string":"Kaunas University of Technology, Lithuania","institution_ids":["https://openalex.org/I172574986"]},{"raw_affiliation_string":"Department of Computer and Information Science Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049514215","display_name":"Hao Tan","orcid":"https://orcid.org/0000-0003-4013-417X"},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]},{"id":"https://openalex.org/I172574986","display_name":"Kaunas University of Technology","ror":"https://ror.org/01me6gb93","country_code":"LT","type":"education","lineage":["https://openalex.org/I172574986"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE","LT","SE"],"is_corresponding":false,"raw_author_name":"H. Tan","raw_affiliation_strings":["Link\u00f6pings universitet and MSc degrees in mathematics and computer science from KU Leuven, Belgium","Kaunas University of Technology, Lithuania","Link\u00f6pings universitet, Sweden","Sweden","Department of Computer and Information Science Link\u00f6pings universitet, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Link\u00f6pings universitet and MSc degrees in mathematics and computer science from KU Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Kaunas University of Technology, Lithuania","institution_ids":["https://openalex.org/I172574986"]},{"raw_affiliation_string":"Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]},{"raw_affiliation_string":"Sweden","institution_ids":[]},{"raw_affiliation_string":"Department of Computer and Information Science Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078158687","display_name":"Patrick Lambrix","orcid":"https://orcid.org/0000-0002-9084-0470"},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]},{"id":"https://openalex.org/I172574986","display_name":"Kaunas University of Technology","ror":"https://ror.org/01me6gb93","country_code":"LT","type":"education","lineage":["https://openalex.org/I172574986"]},{"id":"https://openalex.org/I99464096","display_name":"KU Leuven","ror":"https://ror.org/05f950310","country_code":"BE","type":"education","lineage":["https://openalex.org/I99464096"]}],"countries":["BE","LT","SE"],"is_corresponding":false,"raw_author_name":"P. Lambrix","raw_affiliation_strings":["Link\u00f6pings universitet and MSc degrees in mathematics and computer science from KU Leuven, Belgium","Link\u00f6pings universitet, Sweden","Sweden","Department of Computer and Information Science Link\u00f6pings universitet, Sweden","Kaunas University of Technology, Lithuania"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Link\u00f6pings universitet and MSc degrees in mathematics and computer science from KU Leuven, Belgium","institution_ids":["https://openalex.org/I99464096"]},{"raw_affiliation_string":"Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]},{"raw_affiliation_string":"Sweden","institution_ids":[]},{"raw_affiliation_string":"Department of Computer and Information Science Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]},{"raw_affiliation_string":"Kaunas University of Technology, Lithuania","institution_ids":["https://openalex.org/I172574986"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":null,"fwci":2.7012,"has_fulltext":true,"cited_by_count":38,"citation_normalized_percentile":{"value":0.89948559,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"7","issue":"4","first_page":"331","last_page":"338"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.8399118185043335},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7677534818649292},{"id":"https://openalex.org/keywords/data-exchange","display_name":"Data exchange","score":0.7192644476890564},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.6246160268783569},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6100864410400391},{"id":"https://openalex.org/keywords/focus","display_name":"Focus (optics)","score":0.6016335487365723},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5535476803779602},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.5086913704872131},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.4460594356060028},{"id":"https://openalex.org/keywords/external-data-representation","display_name":"External Data Representation","score":0.4416342079639435},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2700335383415222},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.2490065097808838},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.21840941905975342},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11624452471733093},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.08766481280326843},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.06621047854423523}],"concepts":[{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.8399118185043335},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7677534818649292},{"id":"https://openalex.org/C15845906","wikidata":"https://www.wikidata.org/wiki/Q1172338","display_name":"Data exchange","level":2,"score":0.7192644476890564},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.6246160268783569},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6100864410400391},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.6016335487365723},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5535476803779602},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.5086913704872131},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4460594356060028},{"id":"https://openalex.org/C116409475","wikidata":"https://www.wikidata.org/wiki/Q1385056","display_name":"External Data Representation","level":2,"score":0.4416342079639435},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2700335383415222},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.2490065097808838},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.21840941905975342},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11624452471733093},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.08766481280326843},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.06621047854423523},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbl039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbl039","pdf_url":"https://academic.oup.com/bib/article-pdf/7/4/331/448904/bbl039.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:17132622","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17132622","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:DiVA.org:liu-35521","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-35521","pdf_url":null,"source":{"id":"https://openalex.org/S4306401559","display_name":"KTH Publication Database DiVA (KTH Royal Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/bib/bbl039","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbl039","pdf_url":"https://academic.oup.com/bib/article-pdf/7/4/331/448904/bbl039.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"},{"id":"https://openalex.org/F4320326619","display_name":"National Graduate School in Computer Science","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2138059820.pdf","grobid_xml":"https://content.openalex.org/works/W2138059820.grobid-xml"},"referenced_works_count":35,"referenced_works":["https://openalex.org/W6905619","https://openalex.org/W1495660511","https://openalex.org/W1576691192","https://openalex.org/W1580159914","https://openalex.org/W1828342296","https://openalex.org/W1963861745","https://openalex.org/W1971425971","https://openalex.org/W2006933206","https://openalex.org/W2008656488","https://openalex.org/W2008896880","https://openalex.org/W2022333738","https://openalex.org/W2039386673","https://openalex.org/W2042880070","https://openalex.org/W2057252331","https://openalex.org/W2069162648","https://openalex.org/W2095766238","https://openalex.org/W2098851705","https://openalex.org/W2117364474","https://openalex.org/W2124236793","https://openalex.org/W2126434857","https://openalex.org/W2130863229","https://openalex.org/W2150908245","https://openalex.org/W2158979971","https://openalex.org/W2159675211","https://openalex.org/W2160712097","https://openalex.org/W2160751597","https://openalex.org/W2170032647","https://openalex.org/W3121656998","https://openalex.org/W4239685621","https://openalex.org/W4285719527","https://openalex.org/W6655912567","https://openalex.org/W6661332214","https://openalex.org/W6674943090","https://openalex.org/W6684036115","https://openalex.org/W6684946018"],"related_works":["https://openalex.org/W2138059820","https://openalex.org/W2150928200","https://openalex.org/W2072881356","https://openalex.org/W2138100784","https://openalex.org/W2008656488","https://openalex.org/W2011850841","https://openalex.org/W2348779292","https://openalex.org/W1533837160","https://openalex.org/W2375088348","https://openalex.org/W2045458484"],"abstract_inverted_index":{"One":[0],"important":[1,20,40],"aim":[2],"within":[3,22,45,57],"systems":[4],"biology":[5],"is":[6],"to":[7,14,65],"integrate":[8],"disparate":[9],"pieces":[10],"of":[11,16,30,38,72,85],"information,":[12],"leading":[13],"discovery":[15],"higher-level":[17],"knowledge":[18],"about":[19],"functionality":[21],"living":[23],"organisms.":[24],"This":[25],"makes":[26],"standards":[27,91],"for":[28,34,43,70,88,101],"representation":[29],"data":[31,39,73,102],"and":[32,36,77,92,104],"technology":[33],"exchange":[35,71,103],"integration":[37],"key":[41],"points":[42],"development":[44],"the":[46,54,58,62,66],"area.":[47],"In":[48,79],"this":[49],"article,":[50],"we":[51,81],"focus":[52],"on":[53,95],"recent":[55,63],"developments":[56,98],"field.":[59],"We":[60],"compare":[61],"updates":[64],"three":[67,90],"standard":[68],"representations":[69],"SBML,":[74],"PSI":[75],"MI":[76],"BioPAX.":[78],"addition,":[80],"give":[82],"an":[83],"overview":[84],"available":[86],"tools":[87],"these":[89,97],"a":[93],"discussion":[94],"how":[96],"support":[99],"possibilities":[100],"integration.":[105]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
