{"id":"https://openalex.org/W7164748350","doi":"https://doi.org/10.1093/bib/bbag311","title":"Decoding disease and therapy through multiomics integration and systems analysis","display_name":"Decoding disease and therapy through multiomics integration and systems analysis","publication_year":2026,"publication_date":"2026-05-01","ids":{"openalex":"https://openalex.org/W7164748350","doi":"https://doi.org/10.1093/bib/bbag311","pmid":"https://pubmed.ncbi.nlm.nih.gov/42289048"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbag311","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbag311","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bib/bbag311","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000420932","display_name":"Mano Joseph Mathew","orcid":"https://orcid.org/0000-0002-4930-6903"},"institutions":[{"id":"https://openalex.org/I117841876","display_name":"Universit\u00e9 Paris-Panth\u00e9on-Assas","ror":"https://ror.org/04qb2qm38","country_code":"FR","type":"education","lineage":["https://openalex.org/I117841876"]},{"id":"https://openalex.org/I124158823","display_name":"Conservatoire National des Arts et M\u00e9tiers","ror":"https://ror.org/0175hh227","country_code":"FR","type":"education","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210134562"]},{"id":"https://openalex.org/I2801479458","display_name":"Engineering School of Information and Digital Technologies","ror":"https://ror.org/01h7hvj14","country_code":"FR","type":"education","lineage":["https://openalex.org/I117841876","https://openalex.org/I2801479458"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Mano Joseph Mathew","raw_affiliation_strings":["EFREI Research Lab, Universit\u00e9 Paris-Panth\u00e9on-Assas, \u00c9cole d\u2019Ing\u00e9nieurs G\u00e9n\u00e9raliste du Num\u00e9rique - EFREI Paris , 30\u201332 Avenue de la R\u00e9publique, 94800 Villejuif, Ile de France ,","Laboratoire G\u00e9nomique, Bioinformatique et Chimie Mol\u00e9culaire, EA7528, Conservatoire National des Arts et M\u00e9tiers, HESAM Universit\u00e9 , 2 Rue Cont\u00e9, 75003 Paris, Ile de France ,"],"raw_orcid":"https://orcid.org/0000-0002-4930-6903","affiliations":[{"raw_affiliation_string":"EFREI Research Lab, Universit\u00e9 Paris-Panth\u00e9on-Assas, \u00c9cole d\u2019Ing\u00e9nieurs G\u00e9n\u00e9raliste du Num\u00e9rique - EFREI Paris , 30\u201332 Avenue de la R\u00e9publique, 94800 Villejuif, Ile de France ,","institution_ids":["https://openalex.org/I117841876","https://openalex.org/I2801479458"]},{"raw_affiliation_string":"Laboratoire G\u00e9nomique, Bioinformatique et Chimie Mol\u00e9culaire, EA7528, Conservatoire National des Arts et M\u00e9tiers, HESAM Universit\u00e9 , 2 Rue Cont\u00e9, 75003 Paris, Ile de France ,","institution_ids":["https://openalex.org/I124158823","https://openalex.org/I4210113863"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5138598279","display_name":"Joyal Mathew","orcid":null},"institutions":[{"id":"https://openalex.org/I4210089758","display_name":"Anhalt University of Applied Sciences","ror":"https://ror.org/0076zct58","country_code":"DE","type":"education","lineage":["https://openalex.org/I4210089758"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Joyal Mathew","raw_affiliation_strings":["Anhalt University of Applied Sciences , Bernburger Str. 55, 06366 K\u00f6then (Anhalt), Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhalt University of Applied Sciences , Bernburger Str. 55, 06366 K\u00f6then (Anhalt), Germany","institution_ids":["https://openalex.org/I4210089758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5120178944","display_name":"Ripsy Merrin Chacko","orcid":null},"institutions":[{"id":"https://openalex.org/I124158823","display_name":"Conservatoire National des Arts et M\u00e9tiers","ror":"https://ror.org/0175hh227","country_code":"FR","type":"education","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210134562"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]},{"id":"https://openalex.org/I4210131835","display_name":"Integrative Medicine Institute","ror":"https://ror.org/03b6kz105","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210131835"]},{"id":"https://openalex.org/I4210145299","display_name":"Clinique Hartmann","ror":"https://ror.org/04z27mz17","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210145299"]}],"countries":["FR","US"],"is_corresponding":false,"raw_author_name":"Ripsy Merrin Chacko","raw_affiliation_strings":["Department of Integrative Medicine, Conservatoire National des Arts et Metiers , 292 Rue Saint-Martin, 75003 Paris, Ile de France ,","Hartmann Oncology Radiotherapy Group, Hartmann Radiotherapy Institute , 4 Rue Kl\u00e9ber, 92300 Levallois-Perret, Ile de France ,","Integrative Medicine Center, Rafael Institute , 3 Bd Bineau, 92300 Levallois-Perret, Ile de France, France","Laboratoire G\u00e9nomique, Bioinformatique et Chimie Mol\u00e9culaire, EA7528, Conservatoire National des Arts et M\u00e9tiers, HESAM Universit\u00e9 , 2 Rue Cont\u00e9, 75003 Paris, Ile de France ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Integrative Medicine, Conservatoire National des Arts et Metiers , 292 Rue Saint-Martin, 75003 Paris, Ile de France ,","institution_ids":["https://openalex.org/I124158823"]},{"raw_affiliation_string":"Hartmann Oncology Radiotherapy Group, Hartmann Radiotherapy Institute , 4 Rue Kl\u00e9ber, 92300 Levallois-Perret, Ile de France ,","institution_ids":["https://openalex.org/I4210145299"]},{"raw_affiliation_string":"Integrative Medicine Center, Rafael Institute , 3 Bd Bineau, 92300 Levallois-Perret, Ile de France, France","institution_ids":["https://openalex.org/I4210131835"]},{"raw_affiliation_string":"Laboratoire G\u00e9nomique, Bioinformatique et Chimie Mol\u00e9culaire, EA7528, Conservatoire National des Arts et M\u00e9tiers, HESAM Universit\u00e9 , 2 Rue Cont\u00e9, 75003 Paris, Ile de France ,","institution_ids":["https://openalex.org/I124158823","https://openalex.org/I4210113863"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086147416","display_name":"Jagadeesh Bayry","orcid":"https://orcid.org/0000-0003-0498-9808"},"institutions":[{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]},{"id":"https://openalex.org/I4210092322","display_name":"Centre de Recherche des Cordeliers","ror":"https://ror.org/00dmms154","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210092322"]},{"id":"https://openalex.org/I4210113248","display_name":"Indian Institute of Technology Palakkad","ror":"https://ror.org/0264cg909","country_code":"IN","type":"facility","lineage":["https://openalex.org/I4210113248"]}],"countries":["FR","IN"],"is_corresponding":false,"raw_author_name":"Jagadeesh Bayry","raw_affiliation_strings":["Department of Biological Sciences and Engineering, Indian Institute of Technology Palakkad , Kanjikode, Palakkad 678623 Kerala ,","Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale, Centre de Recherche des Cordeliers, Sorbonne Universit\u00e9, Universit\u00e9 Paris Cit\u00e9 , 15 Rue de l'\u00c9cole de M\u00e9decine, 75006 Paris, Ile de France ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences and Engineering, Indian Institute of Technology Palakkad , Kanjikode, Palakkad 678623 Kerala ,","institution_ids":["https://openalex.org/I4210113248"]},{"raw_affiliation_string":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale, Centre de Recherche des Cordeliers, Sorbonne Universit\u00e9, Universit\u00e9 Paris Cit\u00e9 , 15 Rue de l'\u00c9cole de M\u00e9decine, 75006 Paris, Ile de France ,","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210091437","https://openalex.org/I4210092322"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5138604961","display_name":"Jean-Fran\u00e7ois Zagury","orcid":null},"institutions":[{"id":"https://openalex.org/I124158823","display_name":"Conservatoire National des Arts et M\u00e9tiers","ror":"https://ror.org/0175hh227","country_code":"FR","type":"education","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210134562"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Jean-Fran\u00e7ois Zagury","raw_affiliation_strings":["Laboratoire G\u00e9nomique, Bioinformatique et Chimie Mol\u00e9culaire, EA7528, Conservatoire National des Arts et M\u00e9tiers, HESAM Universit\u00e9 , 2 Rue Cont\u00e9, 75003 Paris, Ile de France ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire G\u00e9nomique, Bioinformatique et Chimie Mol\u00e9culaire, EA7528, Conservatoire National des Arts et M\u00e9tiers, HESAM Universit\u00e9 , 2 Rue Cont\u00e9, 75003 Paris, Ile de France ,","institution_ids":["https://openalex.org/I124158823","https://openalex.org/I4210113863"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5000420932","https://openalex.org/A5138604961"],"corresponding_institution_ids":["https://openalex.org/I117841876","https://openalex.org/I124158823","https://openalex.org/I2801479458","https://openalex.org/I4210113863"],"apc_list":{"value":3885,"currency":"USD","value_usd":3885},"apc_paid":{"value":3885,"currency":"USD","value_usd":3885},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.54393969,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"27","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.12549999356269836,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.12549999356269836,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.11180000007152557,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.09560000151395798,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.6043999791145325},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.51419997215271},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.4952999949455261},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4377000033855438},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4246000051498413},{"id":"https://openalex.org/keywords/profiling","display_name":"Profiling (computer programming)","score":0.4083000123500824},{"id":"https://openalex.org/keywords/system-integration","display_name":"System integration","score":0.39879998564720154},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.37310001254081726}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6421999931335449},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6043999791145325},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.51419997215271},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.4952999949455261},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4377000033855438},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4246000051498413},{"id":"https://openalex.org/C187191949","wikidata":"https://www.wikidata.org/wiki/Q1138496","display_name":"Profiling (computer programming)","level":2,"score":0.4083000123500824},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4007999897003174},{"id":"https://openalex.org/C19527686","wikidata":"https://www.wikidata.org/wiki/Q1665453","display_name":"System integration","level":2,"score":0.39879998564720154},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.37310001254081726},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.35409998893737793},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3246999979019165},{"id":"https://openalex.org/C2988867146","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Human disease","level":3,"score":0.3003999888896942},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.29989999532699585},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2939000129699707},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.29350000619888306},{"id":"https://openalex.org/C33954974","wikidata":"https://www.wikidata.org/wiki/Q486494","display_name":"Sensor fusion","level":2,"score":0.29190000891685486},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.2904999852180481},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.28679999709129333},{"id":"https://openalex.org/C36415437","wikidata":"https://www.wikidata.org/wiki/Q7663871","display_name":"Systems medicine","level":3,"score":0.26809999346733093},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2653999924659729},{"id":"https://openalex.org/C3018799218","wikidata":"https://www.wikidata.org/wiki/Q188193","display_name":"Organ system","level":3,"score":0.2538999915122986},{"id":"https://openalex.org/C3018605307","wikidata":"https://www.wikidata.org/wiki/Q200779","display_name":"Complex disease","level":3,"score":0.251800000667572}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000628","qualifier_name":"therapy","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/bib/bbag311","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbag311","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:42289048","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42289048","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:HAL:hal-05660977v1","is_oa":true,"landing_page_url":"https://hal.science/hal-05660977","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Briefings in Bioinformatics, 2026, 27 (3), &#x27E8;10.1093/bib/bbag311&#x27E9;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13264839","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13264839/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbag311","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbag311","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":135,"referenced_works":["https://openalex.org/W1987219048","https://openalex.org/W2107665951","https://openalex.org/W2110417468","https://openalex.org/W2118258530","https://openalex.org/W2121906867","https://openalex.org/W2577454411","https://openalex.org/W2605897695","https://openalex.org/W2612519453","https://openalex.org/W2767377392","https://openalex.org/W2771094908","https://openalex.org/W2783685429","https://openalex.org/W2784057214","https://openalex.org/W2901677030","https://openalex.org/W2909472027","https://openalex.org/W2916161409","https://openalex.org/W2917207851","https://openalex.org/W2922815614","https://openalex.org/W2940627982","https://openalex.org/W2942880491","https://openalex.org/W2949908578","https://openalex.org/W2955502047","https://openalex.org/W2963276645","https://openalex.org/W2967177832","https://openalex.org/W2981690252","https://openalex.org/W2984472267","https://openalex.org/W3006500278","https://openalex.org/W3006653136","https://openalex.org/W3015030919","https://openalex.org/W3027051073","https://openalex.org/W3033962666","https://openalex.org/W3081357972","https://openalex.org/W3088521497","https://openalex.org/W3091839106","https://openalex.org/W3095239077","https://openalex.org/W3096120119","https://openalex.org/W3096294596","https://openalex.org/W3129866267","https://openalex.org/W3157087909","https://openalex.org/W3157774739","https://openalex.org/W3161185727","https://openalex.org/W3163501683","https://openalex.org/W3165369080","https://openalex.org/W3167229729","https://openalex.org/W3170986249","https://openalex.org/W3176966473","https://openalex.org/W3178383783","https://openalex.org/W3199582177","https://openalex.org/W3206271925","https://openalex.org/W3212515864","https://openalex.org/W4210368516","https://openalex.org/W4210546025","https://openalex.org/W4210587306","https://openalex.org/W4220990424","https://openalex.org/W4221072223","https://openalex.org/W4221095552","https://openalex.org/W4224035764","https://openalex.org/W4253759977","https://openalex.org/W4281663348","https://openalex.org/W4284966464","https://openalex.org/W4284976473","https://openalex.org/W4284988770","https://openalex.org/W4285587952","https://openalex.org/W4294844737","https://openalex.org/W4307715796","https://openalex.org/W4308573601","https://openalex.org/W4309409452","https://openalex.org/W4309514510","https://openalex.org/W4309849610","https://openalex.org/W4311283346","https://openalex.org/W4318825635","https://openalex.org/W4319759388","https://openalex.org/W4321378969","https://openalex.org/W4322739219","https://openalex.org/W4323294508","https://openalex.org/W4323660135","https://openalex.org/W4327569165","https://openalex.org/W4366405321","https://openalex.org/W4372331825","https://openalex.org/W4376630182","https://openalex.org/W4378212544","https://openalex.org/W4379467057","https://openalex.org/W4382632237","https://openalex.org/W4385459199","https://openalex.org/W4385475774","https://openalex.org/W4385738502","https://openalex.org/W4386468546","https://openalex.org/W4386481874","https://openalex.org/W4386496747","https://openalex.org/W4387949251","https://openalex.org/W4388665255","https://openalex.org/W4388735079","https://openalex.org/W4389410347","https://openalex.org/W4389481108","https://openalex.org/W4390954054","https://openalex.org/W4391168615","https://openalex.org/W4391359379","https://openalex.org/W4391535921","https://openalex.org/W4391926902","https://openalex.org/W4392238005","https://openalex.org/W4392802139","https://openalex.org/W4393315502","https://openalex.org/W4396891813","https://openalex.org/W4398140722","https://openalex.org/W4398175196","https://openalex.org/W4398253916","https://openalex.org/W4399389044","https://openalex.org/W4400274657","https://openalex.org/W4401344686","https://openalex.org/W4401530566","https://openalex.org/W4401585036","https://openalex.org/W4402220283","https://openalex.org/W4402552245","https://openalex.org/W4402697799","https://openalex.org/W4404046121","https://openalex.org/W4404641905","https://openalex.org/W4405803449","https://openalex.org/W4406334510","https://openalex.org/W4406931742","https://openalex.org/W4408053967","https://openalex.org/W4408591093","https://openalex.org/W4408745432","https://openalex.org/W4409393755","https://openalex.org/W4409870062","https://openalex.org/W4410840634","https://openalex.org/W4411715757","https://openalex.org/W4411858338","https://openalex.org/W4411918772","https://openalex.org/W4412047446","https://openalex.org/W4412552357","https://openalex.org/W4412654797","https://openalex.org/W4412676279","https://openalex.org/W4414014216","https://openalex.org/W4416617053","https://openalex.org/W4417274340","https://openalex.org/W7125261338"],"related_works":[],"abstract_inverted_index":{"Computational":[0],"multiomics":[1,44,65],"methods":[2],"are":[3,10,102],"based":[4],"on":[5],"machine":[6],"learning":[7],"methods,":[8],"and":[9,23,56,69,75,86,97,111],"primarily":[11],"used":[12],"for":[13,46],"classifying":[14],"patients":[15],"into":[16],"subtypes,":[17],"discovering":[18],"novel":[19],"biomarkers,":[20,85],"drug":[21],"repurposing,":[22],"advancing":[24],"precision":[25,88],"medicine.":[26],"Advances":[27],"in":[28,40,66,80,108],"high-throughput":[29],"technologies":[30],"have":[31],"enabled":[32],"comprehensive":[33],"profiling":[34],"of":[35,43,51,64,77],"multiple":[36],"molecular":[37],"layers,":[38],"resulting":[39],"the":[41,73],"emergence":[42],"approaches":[45],"a":[47],"more":[48],"accurate":[49],"understanding":[50,81],"disease":[52,82],"mechanisms,":[53,83],"therapeutic":[54],"targets,":[55],"biological":[57],"heterogeneity.":[58],"This":[59],"review":[60],"examines":[61],"current":[62],"applications":[63],"oncology,":[67],"ageing,":[68],"immune-mediated":[70],"diseases,":[71],"highlighting":[72],"strengths":[74],"challenges":[76],"integrative":[78],"models":[79],"identifying":[84],"guiding":[87],"therapies.":[89],"Integration":[90],"strategies,":[91],"from":[92],"early":[93],"to":[94,99],"late":[95],"fusion":[96],"horizontal":[98],"vertical":[100],"frameworks,":[101],"also":[103],"examined":[104],"alongside":[105],"recent":[106],"advances":[107],"computational":[109],"platforms":[110],"preprocessing":[112],"techniques.":[113]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2026-06-15T00:00:00"}
