{"id":"https://openalex.org/W4416910635","doi":"https://doi.org/10.1093/bib/bbaf640","title":"Systematic identification and characterization of virus lncRNAs suggests extensive structural mimicry of host lncRNAs","display_name":"Systematic identification and characterization of virus lncRNAs suggests extensive structural mimicry of host lncRNAs","publication_year":2025,"publication_date":"2025-11-01","ids":{"openalex":"https://openalex.org/W4416910635","doi":"https://doi.org/10.1093/bib/bbaf640","pmid":"https://pubmed.ncbi.nlm.nih.gov/41324603"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf640","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf640","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bib/bbaf640","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023236133","display_name":"Ping Fu","orcid":"https://orcid.org/0000-0002-3061-5925"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ping Fu","raw_affiliation_strings":["Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","State Key Laboratory of Chemo/Biosensing and Chemometrics, Longping Agricultural College, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha 410082 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","institution_ids":["https://openalex.org/I16609230"]},{"raw_affiliation_string":"State Key Laboratory of Chemo/Biosensing and Chemometrics, Longping Agricultural College, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha 410082 ,","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071269489","display_name":"Zena Cai","orcid":null},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]},{"id":"https://openalex.org/I4210166238","display_name":"Hunan Provincial Maternal and Child Health Hospital","ror":"https://ror.org/05szwcv45","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210166238"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zena Cai","raw_affiliation_strings":["Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","Department of Medical Genetics, Hunan Provincial Maternal and Child Health Care Hospital , No. 53 Xiangchun Road, Kaifu District, Changsha 410028 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","institution_ids":["https://openalex.org/I16609230"]},{"raw_affiliation_string":"Department of Medical Genetics, Hunan Provincial Maternal and Child Health Care Hospital , No. 53 Xiangchun Road, Kaifu District, Changsha 410028 ,","institution_ids":["https://openalex.org/I4210166238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073338915","display_name":"Ruina You","orcid":null},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ruina You","raw_affiliation_strings":["Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101610321","display_name":"Lei Deng","orcid":"https://orcid.org/0000-0003-2246-0801"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Deng","raw_affiliation_strings":["Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043788863","display_name":"Zhaoyong Li","orcid":"https://orcid.org/0000-0002-1502-4027"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaoyong Li","raw_affiliation_strings":["Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047497779","display_name":"Zhichao Miao","orcid":"https://orcid.org/0000-0002-5777-9815"},"institutions":[{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhichao Miao","raw_affiliation_strings":["GMU-GIBH Joint School of Life Sciences, The Guangdong-Hong Kong-Macau Joint Laboratory for Cell Fate Regulation and Diseases, Guangzhou National Laboratory, Guangzhou Medical University , No. 190 Kaiyuan Road, Guangzhou Science Park, Luogang District, Guangzhou 510530 ,"],"raw_orcid":"https://orcid.org/0000-0002-5777-9815","affiliations":[{"raw_affiliation_string":"GMU-GIBH Joint School of Life Sciences, The Guangdong-Hong Kong-Macau Joint Laboratory for Cell Fate Regulation and Diseases, Guangzhou National Laboratory, Guangzhou Medical University , No. 190 Kaiyuan Road, Guangzhou Science Park, Luogang District, Guangzhou 510530 ,","institution_ids":["https://openalex.org/I92039509"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037335167","display_name":"Yousong Peng","orcid":"https://orcid.org/0000-0002-5482-9506"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yousong Peng","raw_affiliation_strings":["Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,"],"raw_orcid":"https://orcid.org/0000-0002-5482-9506","affiliations":[{"raw_affiliation_string":"Bioinformatics Center, College of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan Research Center of the Basic Discipline for Cell Signaling, Hunan University , No. 27 Tianma Road, Yuelu District, Changsha, 410082 ,","institution_ids":["https://openalex.org/I16609230"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.41184177,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"26","issue":"6","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.7217000126838684,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.7217000126838684,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.04610000178217888,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.038600001484155655,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/vesicular-stomatitis-virus","display_name":"Vesicular stomatitis virus","score":0.699400007724762},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.640500009059906},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6123999953269958},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5468000173568726},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5372999906539917},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.5325999855995178},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.46709999442100525},{"id":"https://openalex.org/keywords/novel-virus","display_name":"Novel virus","score":0.40450000762939453},{"id":"https://openalex.org/keywords/molecular-mimicry","display_name":"Molecular mimicry","score":0.39890000224113464}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8238999843597412},{"id":"https://openalex.org/C2779057330","wikidata":"https://www.wikidata.org/wiki/Q162762","display_name":"Vesicular stomatitis virus","level":3,"score":0.699400007724762},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.640500009059906},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6123999953269958},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6111999750137329},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5468000173568726},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5372999906539917},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.5325999855995178},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.46709999442100525},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4259999990463257},{"id":"https://openalex.org/C2781031778","wikidata":"https://www.wikidata.org/wiki/Q16000255","display_name":"Novel virus","level":4,"score":0.40450000762939453},{"id":"https://openalex.org/C2777119779","wikidata":"https://www.wikidata.org/wiki/Q963278","display_name":"Molecular mimicry","level":3,"score":0.39890000224113464},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.3808000087738037},{"id":"https://openalex.org/C2779174946","wikidata":"https://www.wikidata.org/wiki/Q751911","display_name":"RNA virus","level":4,"score":0.38029998540878296},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.35740000009536743},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3391999900341034},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.33149999380111694},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3089999854564667},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.30630001425743103},{"id":"https://openalex.org/C75934600","wikidata":"https://www.wikidata.org/wiki/Q419245","display_name":"Ribonucleoprotein","level":4,"score":0.30300000309944153},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.2953000068664551},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.29190000891685486},{"id":"https://openalex.org/C7863114","wikidata":"https://www.wikidata.org/wiki/Q192627","display_name":"Mimicry","level":2,"score":0.2849000096321106},{"id":"https://openalex.org/C2777546802","wikidata":"https://www.wikidata.org/wiki/Q834390","display_name":"Influenza A virus","level":3,"score":0.2793000042438507},{"id":"https://openalex.org/C194993378","wikidata":"https://www.wikidata.org/wiki/Q427087","display_name":"Non-coding RNA","level":4,"score":0.27709999680519104},{"id":"https://openalex.org/C121050878","wikidata":"https://www.wikidata.org/wiki/Q5135020","display_name":"Cloning (programming)","level":2,"score":0.2766999900341034},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.2711000144481659},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2581000030040741}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1093/bib/bbaf640","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf640","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41324603","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41324603","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf640","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf640","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4776858495","display_name":null,"funder_award_id":"2024JJ2015","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"},{"id":"https://openalex.org/G6246526634","display_name":null,"funder_award_id":"32370700","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7181850838","display_name":null,"funder_award_id":"32170651","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322843","display_name":"Natural Science Foundation of\u00a0Hunan Province","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":65,"referenced_works":["https://openalex.org/W319663821","https://openalex.org/W1975765143","https://openalex.org/W1984621241","https://openalex.org/W2029228478","https://openalex.org/W2032183472","https://openalex.org/W2038591366","https://openalex.org/W2048194168","https://openalex.org/W2054776071","https://openalex.org/W2055043387","https://openalex.org/W2061548680","https://openalex.org/W2086561953","https://openalex.org/W2094276973","https://openalex.org/W2103760949","https://openalex.org/W2120456037","https://openalex.org/W2139687548","https://openalex.org/W2141152740","https://openalex.org/W2148440912","https://openalex.org/W2154825888","https://openalex.org/W2162105224","https://openalex.org/W2162547088","https://openalex.org/W2321969122","https://openalex.org/W2540381357","https://openalex.org/W2597872331","https://openalex.org/W2600714175","https://openalex.org/W2615786037","https://openalex.org/W2638860981","https://openalex.org/W2746147763","https://openalex.org/W2750107048","https://openalex.org/W2789843538","https://openalex.org/W2898440040","https://openalex.org/W2901196346","https://openalex.org/W2949317881","https://openalex.org/W2951579118","https://openalex.org/W2957663557","https://openalex.org/W2963269831","https://openalex.org/W2988190876","https://openalex.org/W3017559929","https://openalex.org/W3035730162","https://openalex.org/W3100348855","https://openalex.org/W3121624986","https://openalex.org/W3137047737","https://openalex.org/W3137907801","https://openalex.org/W3175752499","https://openalex.org/W3199282695","https://openalex.org/W3209800503","https://openalex.org/W3212112960","https://openalex.org/W3214124483","https://openalex.org/W3216955846","https://openalex.org/W4200231397","https://openalex.org/W4206112501","https://openalex.org/W4298151952","https://openalex.org/W4308765700","https://openalex.org/W4309095774","https://openalex.org/W4321996598","https://openalex.org/W4380028528","https://openalex.org/W4386035419","https://openalex.org/W4386102838","https://openalex.org/W4386863937","https://openalex.org/W4389953588","https://openalex.org/W4390617624","https://openalex.org/W4392059585","https://openalex.org/W4405153032","https://openalex.org/W4407028386","https://openalex.org/W4408194530","https://openalex.org/W4408328169"],"related_works":[],"abstract_inverted_index":{"Virus":[0],"long":[1],"noncoding":[2],"RNAs":[3],"(vlncRNAs)":[4],"play":[5],"crucial":[6],"roles":[7],"in":[8],"viral":[9,26],"infections,":[10],"yet":[11],"their":[12],"identification":[13],"and":[14,37,89,123,128,143,151],"characterization":[15],"remain":[16],"limited.":[17],"This":[18],"study":[19,133],"identified":[20,127],"5,053":[21],"novel":[22,60],"vlncRNAs":[23,45,53,68,81,108,142],"across":[24],"25":[25],"species":[27],"using":[28],"third-generation":[29],"sequencing,":[30],"with":[31,85],"two":[32],"from":[33,47,69],"Influenza":[34],"A":[35],"virus":[36,40],"Vesicular":[38],"stomatitis":[39],"validated":[41],"by":[42],"RT-qPCR.":[43],"Most":[44],"originated":[46],"dsDNA":[48],"viruses.":[49],"Only":[50],"~1%":[51],"of":[52,66,112,147,153],"have":[54],"annotated":[55],"RNA":[56,61],"families,":[57],"suggesting":[58],"many":[59],"structures.":[62],"Interestingly,":[63],"a":[64,110,135],"total":[65],"772":[67],"15":[70],"human":[71,75],"viruses":[72],"structurally":[73],"mimicked":[74],"lncRNAs":[76],"(hlncRNAs),":[77],"while":[78],"only":[79],"seven":[80],"shared":[82],"sequence":[83],"similarities":[84],"hlncRNAs.":[86],"These":[87],"vlncRNA":[88],"hlncRNAs":[90],"bound":[91],"to":[92,100,121],"similar":[93],"miRNAs,":[94],"potentially":[95],"acting":[96],"as":[97],"miRNA":[98],"sponges":[99],"promote":[101],"essential":[102],"life":[103],"processes.":[104],"Splicing":[105],"analysis":[106],"showed":[107],"had":[109],"prevalence":[111],"alternative":[113],"first":[114],"exon.":[115],"Finally,":[116],"we":[117],"developed":[118],"vlncRNAbase":[119],"(http://computationalbiology.cn/vlncRNAbase/#/)":[120],"store":[122],"organize":[124],"the":[125,132,148,154],"newly":[126],"known":[129],"vlncRNAs.":[130],"Overall,":[131],"provides":[134],"valuable":[136],"resource":[137],"for":[138],"further":[139],"investigation":[140],"into":[141],"deepens":[144],"our":[145],"understanding":[146],"diversity,":[149],"structure,":[150],"function":[152],"molecule.":[155]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-12-02T00:00:00"}
