{"id":"https://openalex.org/W4415614805","doi":"https://doi.org/10.1093/bib/bbaf553","title":"Spatial transcriptomics: a bibliometric analysis with large language model on English literatures","display_name":"Spatial transcriptomics: a bibliometric analysis with large language model on English literatures","publication_year":2025,"publication_date":"2025-08-31","ids":{"openalex":"https://openalex.org/W4415614805","doi":"https://doi.org/10.1093/bib/bbaf553","pmid":"https://pubmed.ncbi.nlm.nih.gov/41139313"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf553","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf553","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bib/bbaf553","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101981433","display_name":"Huiyang Li","orcid":"https://orcid.org/0000-0003-0717-0419"},"institutions":[{"id":"https://openalex.org/I2802534033","display_name":"Tianjin Medical University General Hospital","ror":"https://ror.org/003sav965","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802534033"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Huiyang Li","raw_affiliation_strings":["Department of Gynecology and Obstetrics, Tianjin Medical University General Hospital , Tianjin ,","Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital , Tianjin ,","Department of Gynecology and Obstetrics, Tianjin Medical University General Hospital, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gynecology and Obstetrics, Tianjin Medical University General Hospital , Tianjin ,","institution_ids":["https://openalex.org/I2802534033"]},{"raw_affiliation_string":"Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital , Tianjin ,","institution_ids":["https://openalex.org/I2802534033"]},{"raw_affiliation_string":"Department of Gynecology and Obstetrics, Tianjin Medical University General Hospital, Tianjin, China","institution_ids":["https://openalex.org/I2802534033"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088657878","display_name":"Haixiao Wu","orcid":"https://orcid.org/0000-0002-2699-466X"},"institutions":[{"id":"https://openalex.org/I2802573037","display_name":"Tianjin Medical University Cancer Institute and Hospital","ror":"https://ror.org/0152hn881","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802573037"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haixiao Wu","raw_affiliation_strings":["Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer , Tianjin ,","Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer , Tianjin ,","institution_ids":["https://openalex.org/I2802573037"]},{"raw_affiliation_string":"Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, China","institution_ids":["https://openalex.org/I2802573037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026964697","display_name":"Wenjuan Ma","orcid":"https://orcid.org/0000-0002-7739-4891"},"institutions":[{"id":"https://openalex.org/I2802573037","display_name":"Tianjin Medical University Cancer Institute and Hospital","ror":"https://ror.org/0152hn881","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802573037"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjuan Ma","raw_affiliation_strings":["Department of Breast Imaging, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital , Tianjin ,","Department of Breast Imaging, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Breast Imaging, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital , Tianjin ,","institution_ids":["https://openalex.org/I2802573037"]},{"raw_affiliation_string":"Department of Breast Imaging, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin Medical University Cancer Institute and Hospital, Tianjin, China","institution_ids":["https://openalex.org/I2802573037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5114909666","display_name":"Shu Li","orcid":null},"institutions":[{"id":"https://openalex.org/I12411659","display_name":"Tianjin University of Traditional Chinese Medicine","ror":"https://ror.org/05dfcz246","country_code":"CN","type":"education","lineage":["https://openalex.org/I12411659"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shu Li","raw_affiliation_strings":["Department of Public Service Management, School of Management, Tianjin University of Traditional Chinese Medicine , Tianjin ,","Department of Public Service Management, School of Management, Tianjin University of Traditional Chinese Medicine, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Public Service Management, School of Management, Tianjin University of Traditional Chinese Medicine , Tianjin ,","institution_ids":["https://openalex.org/I12411659"]},{"raw_affiliation_string":"Department of Public Service Management, School of Management, Tianjin University of Traditional Chinese Medicine, Tianjin, China","institution_ids":["https://openalex.org/I12411659"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071808310","display_name":"Jun Cai","orcid":"https://orcid.org/0000-0003-2733-9373"},"institutions":[{"id":"https://openalex.org/I2802573037","display_name":"Tianjin Medical University Cancer Institute and Hospital","ror":"https://ror.org/0152hn881","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802573037"]},{"id":"https://openalex.org/I4210105139","display_name":"Tianjin Institute of Pharmaceutical Research (China)","ror":"https://ror.org/01g9y2x13","country_code":"CN","type":"company","lineage":["https://openalex.org/I4210105139"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Cai","raw_affiliation_strings":["Department of Cancer Pharmacology, Tianjin Institute of Medical and Pharmaceutical Sciences, Tianjin Medicine and Health Research Center , Tianjin ,","Department of Cancer Pharmacology, Tianjin Institute of Medical and Pharmaceutical Sciences, Tianjin Medicine and Health Research Center, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cancer Pharmacology, Tianjin Institute of Medical and Pharmaceutical Sciences, Tianjin Medicine and Health Research Center , Tianjin ,","institution_ids":["https://openalex.org/I4210105139","https://openalex.org/I2802573037"]},{"raw_affiliation_string":"Department of Cancer Pharmacology, Tianjin Institute of Medical and Pharmaceutical Sciences, Tianjin Medicine and Health Research Center, Tianjin, China","institution_ids":["https://openalex.org/I4210105139","https://openalex.org/I2802573037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004037625","display_name":"Yile Lin","orcid":"https://orcid.org/0000-0003-1836-4059"},"institutions":[{"id":"https://openalex.org/I17877952","display_name":"Sechenov University","ror":"https://ror.org/02yqqv993","country_code":"RU","type":"education","lineage":["https://openalex.org/I17877952"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Yile Lin","raw_affiliation_strings":["I.M. Sechenov First Moscow State Medical University (Sechenov University) , Moscow ,","I.M. Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"I.M. Sechenov First Moscow State Medical University (Sechenov University) , Moscow ,","institution_ids":["https://openalex.org/I17877952"]},{"raw_affiliation_string":"I.M. Sechenov First Moscow State Medical University (Sechenov University), Moscow, Russia","institution_ids":["https://openalex.org/I17877952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100405906","display_name":"Jin Zhang","orcid":"https://orcid.org/0000-0001-7009-8865"},"institutions":[{"id":"https://openalex.org/I2802573037","display_name":"Tianjin Medical University Cancer Institute and Hospital","ror":"https://ror.org/0152hn881","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802573037"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin Zhang","raw_affiliation_strings":["Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer , Tianjin ,","Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer , Tianjin ,","institution_ids":["https://openalex.org/I2802573037"]},{"raw_affiliation_string":"Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, China","institution_ids":["https://openalex.org/I2802573037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101757479","display_name":"Yingmei Wang","orcid":"https://orcid.org/0000-0001-9883-5054"},"institutions":[{"id":"https://openalex.org/I2802534033","display_name":"Tianjin Medical University General Hospital","ror":"https://ror.org/003sav965","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802534033"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yingmei Wang","raw_affiliation_strings":["Department of Gynecology and Obstetrics, Tianjin Medical University General Hospital , Tianjin ,","Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital , Tianjin ,","Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Gynecology and Obstetrics, Tianjin Medical University General Hospital , Tianjin ,","institution_ids":["https://openalex.org/I2802534033"]},{"raw_affiliation_string":"Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital , Tianjin ,","institution_ids":["https://openalex.org/I2802534033"]},{"raw_affiliation_string":"Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital, Tianjin, China","institution_ids":["https://openalex.org/I2802534033"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100460086","display_name":"Chao Zhang","orcid":"https://orcid.org/0000-0001-7096-8488"},"institutions":[{"id":"https://openalex.org/I2802573037","display_name":"Tianjin Medical University Cancer Institute and Hospital","ror":"https://ror.org/0152hn881","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2802573037"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chao Zhang","raw_affiliation_strings":["Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer , Tianjin ,","Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, China"],"raw_orcid":"https://orcid.org/0000-0001-7096-8488","affiliations":[{"raw_affiliation_string":"Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin\u2019s Clinical Research Center for Cancer , Tianjin ,","institution_ids":["https://openalex.org/I2802573037"]},{"raw_affiliation_string":"Department of Bone and Soft Tissue Tumor, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin's Clinical Research Center for Cancer, Tianjin, China","institution_ids":["https://openalex.org/I2802573037"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5101981433"],"corresponding_institution_ids":["https://openalex.org/I2802534033"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.2422218,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"26","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9093000292778015,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9093000292778015,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13410","display_name":"Immune responses and vaccinations","score":0.016200000420212746,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.011699999682605267,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bibliometrics","display_name":"Bibliometrics","score":0.7759000062942505},{"id":"https://openalex.org/keywords/multidisciplinary-approach","display_name":"Multidisciplinary approach","score":0.6736999750137329},{"id":"https://openalex.org/keywords/publishing","display_name":"Publishing","score":0.5598999857902527},{"id":"https://openalex.org/keywords/web-of-science","display_name":"Web of science","score":0.46380001306533813},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4381999969482422},{"id":"https://openalex.org/keywords/spatial-analysis","display_name":"Spatial analysis","score":0.2897999882698059}],"concepts":[{"id":"https://openalex.org/C178315738","wikidata":"https://www.wikidata.org/wiki/Q603441","display_name":"Bibliometrics","level":2,"score":0.7759000062942505},{"id":"https://openalex.org/C22467394","wikidata":"https://www.wikidata.org/wiki/Q849359","display_name":"Multidisciplinary approach","level":2,"score":0.6736999750137329},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5788000226020813},{"id":"https://openalex.org/C151719136","wikidata":"https://www.wikidata.org/wiki/Q3972943","display_name":"Publishing","level":2,"score":0.5598999857902527},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5324000120162964},{"id":"https://openalex.org/C3020774429","wikidata":"https://www.wikidata.org/wiki/Q1201886","display_name":"Web of science","level":3,"score":0.46380001306533813},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4381999969482422},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3743000030517578},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.3285999894142151},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.30169999599456787},{"id":"https://openalex.org/C159620131","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Spatial analysis","level":2,"score":0.2897999882698059},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.28780001401901245},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.2800999879837036},{"id":"https://openalex.org/C171686336","wikidata":"https://www.wikidata.org/wiki/Q3532085","display_name":"Topic model","level":2,"score":0.26910001039505005},{"id":"https://openalex.org/C2987496018","wikidata":"https://www.wikidata.org/wiki/Q1860","display_name":"English language","level":2,"score":0.2685000002384186}],"mesh":[{"descriptor_ui":"D000071077","descriptor_name":"Surgical Oncology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000071077","descriptor_name":"Surgical Oncology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098342","descriptor_name":"Large Language Models","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000099285","descriptor_name":"Spatial Transcriptomics","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":true},{"descriptor_ui":"D000099285","descriptor_name":"Spatial Transcriptomics","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009488","descriptor_name":"Neurosciences","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D019139","descriptor_name":"Tumor Escape","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf553","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf553","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41139313","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41139313","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:11361435","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12554094","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf553","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf553","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1437765613","display_name":null,"funder_award_id":"2023jsz905","funder_id":"https://openalex.org/F4320311039","funder_display_name":"Ministry of Higher Education and Scientific Research"},{"id":"https://openalex.org/G1493285168","display_name":null,"funder_award_id":"23JCQNJC00600","funder_id":"https://openalex.org/F4320335468","funder_display_name":"Natural Science Foundation of Tianjin Municipal Science and Technology Commission"},{"id":"https://openalex.org/G5620120498","display_name":null,"funder_award_id":"72304207","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6643948680","display_name":null,"funder_award_id":"82304797","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8509628866","display_name":null,"funder_award_id":"82011530050","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320311039","display_name":"Ministry of Higher Education and Scientific Research","ror":"https://ror.org/00kab6t91"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335468","display_name":"Natural Science Foundation of Tianjin Municipal Science and Technology Commission","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W2471536144","https://openalex.org/W2922090002","https://openalex.org/W2972983657","https://openalex.org/W3036371598","https://openalex.org/W3044030235","https://openalex.org/W3124439729","https://openalex.org/W3172602094","https://openalex.org/W3190202966","https://openalex.org/W3193032675","https://openalex.org/W3193419934","https://openalex.org/W4281618613","https://openalex.org/W4282579661","https://openalex.org/W4283703268","https://openalex.org/W4294053500","https://openalex.org/W4306194402","https://openalex.org/W4308972645","https://openalex.org/W4313312704","https://openalex.org/W4313454832","https://openalex.org/W4315786257","https://openalex.org/W4319440743","https://openalex.org/W4321116368","https://openalex.org/W4322768301","https://openalex.org/W4353015465","https://openalex.org/W4376630701","https://openalex.org/W4379467057","https://openalex.org/W4380986217","https://openalex.org/W4381548118","https://openalex.org/W4381612489","https://openalex.org/W4383340946","https://openalex.org/W4383620511","https://openalex.org/W4384818874","https://openalex.org/W4386221025","https://openalex.org/W4386692444","https://openalex.org/W4386834775","https://openalex.org/W4387235767","https://openalex.org/W4387439135","https://openalex.org/W4387699753","https://openalex.org/W4388339844","https://openalex.org/W4388409275","https://openalex.org/W4389429489","https://openalex.org/W4390919973","https://openalex.org/W4391428168","https://openalex.org/W4396935629","https://openalex.org/W4399830347","https://openalex.org/W4400896461","https://openalex.org/W4401380386","https://openalex.org/W4401441420","https://openalex.org/W4401451968","https://openalex.org/W4401470797","https://openalex.org/W4402521632","https://openalex.org/W4402891802","https://openalex.org/W4402903811","https://openalex.org/W4402991194","https://openalex.org/W4408967910","https://openalex.org/W4410313401","https://openalex.org/W4411369601","https://openalex.org/W4412006463"],"related_works":[],"abstract_inverted_index":{"Spatial":[0],"transcriptomics":[1],"(ST)":[2],"integrates":[3],"spatial":[4],"data":[5],"with":[6,68],"transcriptomic":[7],"information,":[8],"providing":[9],"high-resolution":[10],"maps":[11],"of":[12,38,44,74,133,139],"gene":[13],"expression":[14],"within":[15],"tissue":[16],"contexts.":[17],"It":[18],"has":[19],"revolutionized":[20],"studies":[21],"on":[22,48],"cellular":[23],"function":[24],"and":[25,31,53,95,103,116,143],"disease":[26],"mechanisms,":[27],"particularly":[28],"in":[29,61,71,101],"cancer":[30,102],"immunology.":[32,104],"We":[33],"conducted":[34],"a":[35],"bibliometric":[36,134],"analysis":[37,55,86],"1197":[39],"publications":[40,64],"from":[41,66,80],"the":[42,75,81,131,137],"Web":[43],"Science":[45],"(2015-24),":[46],"focusing":[47],"publication":[49],"trends,":[50],"journal":[51],"distribution,":[52],"keyword":[54],"to":[56],"identify":[57],"key":[58],"research":[59],"areas":[60],"ST.":[62],"ST":[63],"surged":[65],"2021,":[67],"500":[69],"papers":[70],"2023.":[72],"Five":[73],"top":[76],"10":[77],"journals":[78],"are":[79],"Nature":[82],"Publishing":[83],"Group.":[84],"Keyword":[85],"identified":[87],"emerging":[88],"trends":[89,119],"like":[90],"\"tumor":[91],"microenvironment,\"":[92],"\"immune":[93],"infiltration,\"":[94],"\"biomarker,\"":[96],"highlighting":[97],"ST's":[98,114],"expanding":[99],"role":[100],"International":[105],"collaboration":[106],"among":[107],"multidisciplinary":[108],"teams":[109],"is":[110],"crucial":[111],"for":[112],"maximizing":[113],"potential,":[115],"understanding":[117],"its":[118,122],"will":[120],"guide":[121],"future":[123],"impact.":[124],"Large":[125],"language":[126],"models":[127],"can":[128],"further":[129],"enrich":[130],"results":[132],"research,":[135],"making":[136],"findings":[138],"bibliometrics":[140],"more":[141],"comprehensive":[142],"specific.":[144]},"counts_by_year":[],"updated_date":"2026-06-02T09:04:35.204637","created_date":"2025-10-28T00:00:00"}
