{"id":"https://openalex.org/W4414164416","doi":"https://doi.org/10.1093/bib/bbaf469","title":"ISENICS: a model for identifying senescent immune cells and samples and characterization of their roles in tumor microenvironment","display_name":"ISENICS: a model for identifying senescent immune cells and samples and characterization of their roles in tumor microenvironment","publication_year":2025,"publication_date":"2025-08-22","ids":{"openalex":"https://openalex.org/W4414164416","doi":"https://doi.org/10.1093/bib/bbaf469","pmid":"https://pubmed.ncbi.nlm.nih.gov/40966646"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf469","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf469","pdf_url":"https://academic.oup.com/bib/article-pdf/26/5/bbaf469/64238038/bbaf469.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/bib/article-pdf/26/5/bbaf469/64238038/bbaf469.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5114177534","display_name":"Miaomiao Tian","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Miaomiao Tian","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":"https://orcid.org/0009-0004-8784-1394","affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101977827","display_name":"Hao Cui","orcid":"https://orcid.org/0000-0002-1286-1196"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I4210132813","display_name":"Second Affiliated Hospital of Harbin Medical University","ror":"https://ror.org/03s8txj32","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210132813"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Cui","raw_affiliation_strings":["The Second Affiliated Hospital of Harbin Medical University , No. 148 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Second Affiliated Hospital of Harbin Medical University , No. 148 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I4210132813","https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100352828","display_name":"Xinyu Wang","orcid":"https://orcid.org/0000-0003-0806-4335"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyu Wang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5119608535","display_name":"Huading Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huading Hu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050297378","display_name":"Longlong Dong","orcid":"https://orcid.org/0000-0002-9197-5836"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Longlong Dong","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112940097","display_name":"Song Xiao","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I4210132813","display_name":"Second Affiliated Hospital of Harbin Medical University","ror":"https://ror.org/03s8txj32","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210132813"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Song Xiao","raw_affiliation_strings":["The Second Affiliated Hospital of Harbin Medical University , No. 148 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":"https://orcid.org/0009-0001-3160-5331","affiliations":[{"raw_affiliation_string":"The Second Affiliated Hospital of Harbin Medical University , No. 148 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I4210132813","https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102630075","display_name":"Changfan Qu","orcid":null},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Changfan Qu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115602726","display_name":"Peng Wang","orcid":"https://orcid.org/0000-0002-5716-9937"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Wang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":"https://orcid.org/0000-0002-5716-9937","affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065424052","display_name":"Hui Zhi","orcid":"https://orcid.org/0000-0001-9103-8642"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Zhi","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014925086","display_name":"Shangwei Ning","orcid":"https://orcid.org/0000-0003-4079-8945"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shangwei Ning","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":"https://orcid.org/0000-0003-4079-8945","affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100726293","display_name":"Yue Gao","orcid":"https://orcid.org/0000-0002-9217-5021"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yue Gao","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University , No. 157 Baojian Road, Nangang District, Harbin City, Heilongjiang Province, 150081 ,","institution_ids":["https://openalex.org/I156144747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":1.1249,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.80055491,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":98},"biblio":{"volume":"26","issue":"5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.9182000160217285},{"id":"https://openalex.org/keywords/senescence","display_name":"Senescence","score":0.8766999840736389},{"id":"https://openalex.org/keywords/immunosenescence","display_name":"Immunosenescence","score":0.7261999845504761},{"id":"https://openalex.org/keywords/tumor-microenvironment","display_name":"Tumor microenvironment","score":0.5604000091552734},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4431000053882599},{"id":"https://openalex.org/keywords/immunotherapy","display_name":"Immunotherapy","score":0.4366999864578247},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.39989998936653137},{"id":"https://openalex.org/keywords/cancer-cell","display_name":"Cancer cell","score":0.38850000500679016}],"concepts":[{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.9182000160217285},{"id":"https://openalex.org/C522857546","wikidata":"https://www.wikidata.org/wiki/Q2070979","display_name":"Senescence","level":2,"score":0.8766999840736389},{"id":"https://openalex.org/C2779056147","wikidata":"https://www.wikidata.org/wiki/Q1660191","display_name":"Immunosenescence","level":3,"score":0.7261999845504761},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6948000192642212},{"id":"https://openalex.org/C2776107976","wikidata":"https://www.wikidata.org/wiki/Q1786433","display_name":"Tumor microenvironment","level":3,"score":0.5604000091552734},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.45329999923706055},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4431000053882599},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.4390999972820282},{"id":"https://openalex.org/C2777701055","wikidata":"https://www.wikidata.org/wiki/Q1427096","display_name":"Immunotherapy","level":3,"score":0.4366999864578247},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.4000999927520752},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.39989998936653137},{"id":"https://openalex.org/C96232424","wikidata":"https://www.wikidata.org/wiki/Q4118072","display_name":"Cancer cell","level":3,"score":0.38850000500679016},{"id":"https://openalex.org/C2779523775","wikidata":"https://www.wikidata.org/wiki/Q9075999","display_name":"Cellular senescence","level":4,"score":0.3578000068664551},{"id":"https://openalex.org/C189014844","wikidata":"https://www.wikidata.org/wiki/Q189118","display_name":"Cell type","level":3,"score":0.3517000079154968},{"id":"https://openalex.org/C2776090121","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T cell","level":3,"score":0.3192000091075897},{"id":"https://openalex.org/C2780674031","wikidata":"https://www.wikidata.org/wiki/Q2012719","display_name":"Cancer immunotherapy","level":4,"score":0.3125999867916107},{"id":"https://openalex.org/C157081693","wikidata":"https://www.wikidata.org/wiki/Q21113934","display_name":"CCL18","level":4,"score":0.30809998512268066},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.298799991607666},{"id":"https://openalex.org/C3019359096","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune surveillance","level":3,"score":0.2705000042915344},{"id":"https://openalex.org/C103474210","wikidata":"https://www.wikidata.org/wiki/Q142851","display_name":"Immune receptor","level":3,"score":0.2655999958515167},{"id":"https://openalex.org/C3017875465","wikidata":"https://www.wikidata.org/wiki/Q189146","display_name":"Cellular immunity","level":3,"score":0.263700008392334},{"id":"https://openalex.org/C2776914184","wikidata":"https://www.wikidata.org/wiki/Q101991","display_name":"Inflammation","level":2,"score":0.2558000087738037},{"id":"https://openalex.org/C2779256057","wikidata":"https://www.wikidata.org/wiki/Q16909647","display_name":"Tumor progression","level":3,"score":0.250900000333786}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008264","descriptor_name":"Macrophages","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D016922","descriptor_name":"Cellular Senescence","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf469","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf469","pdf_url":"https://academic.oup.com/bib/article-pdf/26/5/bbaf469/64238038/bbaf469.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40966646","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40966646","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12423394","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12423394/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf469","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf469","pdf_url":"https://academic.oup.com/bib/article-pdf/26/5/bbaf469/64238038/bbaf469.pdf","source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3670759961","display_name":null,"funder_award_id":"32370718","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4503780589","display_name":null,"funder_award_id":"32100528","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4414164416.pdf","grobid_xml":"https://content.openalex.org/works/W4414164416.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W2012034410","https://openalex.org/W2130430382","https://openalex.org/W2507880739","https://openalex.org/W2533508881","https://openalex.org/W2554825328","https://openalex.org/W2600132724","https://openalex.org/W2615498501","https://openalex.org/W2777786283","https://openalex.org/W2781505525","https://openalex.org/W2899718571","https://openalex.org/W2904408826","https://openalex.org/W2908922892","https://openalex.org/W2947554843","https://openalex.org/W2953870751","https://openalex.org/W3014402470","https://openalex.org/W3026731380","https://openalex.org/W3103119004","https://openalex.org/W3111207111","https://openalex.org/W3134651853","https://openalex.org/W3161778279","https://openalex.org/W3172370413","https://openalex.org/W3185587603","https://openalex.org/W3194316549","https://openalex.org/W3203461521","https://openalex.org/W4200606392","https://openalex.org/W4221008887","https://openalex.org/W4221091893","https://openalex.org/W4225082643","https://openalex.org/W4280558960","https://openalex.org/W4292004337","https://openalex.org/W4308589388","https://openalex.org/W4309326847","https://openalex.org/W4317390676","https://openalex.org/W4376631082","https://openalex.org/W4378980781","https://openalex.org/W4379056388","https://openalex.org/W4382877140","https://openalex.org/W4387138272","https://openalex.org/W4392819073","https://openalex.org/W4394693133","https://openalex.org/W4396894987","https://openalex.org/W4402442405","https://openalex.org/W4406034879","https://openalex.org/W4406931742"],"related_works":[],"abstract_inverted_index":{"Senescent":[0,56],"immune":[1,28,49,69,74,86,168,177,190,201,205,215],"cells":[2,23,70,178,191],"secrete":[3],"varied":[4],"inflammatory":[5],"factors":[6],"that":[7,107],"weaken":[8],"the":[9,15,27,44,65,72,101,130,141,156,159,193],"systemic":[10],"anti-tumor":[11],"ability":[12],"and":[13,17,59,80,132,161,204,207],"promote":[14],"proliferation":[16],"metastasis":[18],"of":[19,40,47,67,148,163,188],"tumor":[20,73,108],"cells.":[21,216],"Tumor":[22],"could":[24],"also":[25],"accelerate":[26],"cellular":[29,102,134,169,202],"senescence":[30,45,103,112,135,142,170,203],"through":[31],"diverse":[32],"mechanisms.":[33],"However,":[34],"there":[35],"has":[36],"been":[37],"a":[38,96,209],"lack":[39],"indicators":[41],"to":[42,63,120],"quantify":[43],"levels":[46,113,147],"different":[48],"cell":[50,87,124],"types.":[51],"A":[52],"model":[53,210],"for":[54,91,211],"Identifying":[55],"Immune":[57],"Cells":[58],"Samples":[60,174],"was":[61],"developed":[62],"explore":[64],"role":[66],"senescent":[68,176,189,214],"in":[71,129,140,171,192],"microenvironment":[75],"(TIME).":[76],"By":[77,99],"integrating":[78],"bulk":[79],"single-cell":[81,157],"RNA-seq":[82],"data,":[83],"we":[84,105],"constructed":[85],"gene":[88],"expression":[89],"profiles":[90],"23":[92],"cancer":[93],"types":[94],"using":[95],"deconvolution":[97],"algorithm.":[98],"calculating":[100],"scores,":[104],"found":[106],"samples":[109],"exhibited":[110,179],"higher":[111,146],"than":[114],"normal":[115],"samples.":[116],"Monocytes/macrophages":[117],"were":[118,138,150],"prone":[119],"co-senescence":[121],"with":[122,145,152,175],"other":[123],"subtypes.":[125],"Differentially":[126],"expressed":[127],"genes":[128],"high-":[131],"low-immune":[133],"scores":[136],"groups":[137],"enriched":[139],"pathway.":[143],"Patients":[144],"immunosenescence":[149],"associated":[151],"better":[153],"prognosis.":[154],"At":[155],"level,":[158],"number":[160],"strength":[162],"cell-to-cell":[164],"interactions":[165],"increased":[166],"following":[167],"most":[172],"cancers.":[173],"poorer":[180],"immunotherapy":[181],"response.":[182],"Our":[183],"study":[184],"advances":[185],"our":[186],"understanding":[187],"TIME,":[194],"provides":[195],"insights":[196],"into":[197],"cancer-specific":[198],"relationships":[199],"between":[200],"characteristics,":[206],"offers":[208],"identifying":[212],"these":[213]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
