{"id":"https://openalex.org/W4413105168","doi":"https://doi.org/10.1093/bib/bbaf400","title":"scDCT: a conditional diffusion-based deep learning model for high-fidelity single-cell cross-modality translation","display_name":"scDCT: a conditional diffusion-based deep learning model for high-fidelity single-cell cross-modality translation","publication_year":2025,"publication_date":"2025-07-01","ids":{"openalex":"https://openalex.org/W4413105168","doi":"https://doi.org/10.1093/bib/bbaf400","pmid":"https://pubmed.ncbi.nlm.nih.gov/40794946"},"language":"en","primary_location":{"id":"doi:10.1093/bib/bbaf400","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf400","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/bib/bbaf400","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011001187","display_name":"Junlei Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junlei Zhou","raw_affiliation_strings":["School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111064602","display_name":"Jialiang Xue","orcid":null},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jialiang Xue","raw_affiliation_strings":["School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100421418","display_name":"Yang Li","orcid":"https://orcid.org/0000-0002-0736-251X"},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yang Li","raw_affiliation_strings":["School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026553094","display_name":"Furui Liu","orcid":"https://orcid.org/0000-0003-3997-3822"},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Furui Liu","raw_affiliation_strings":["School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030739481","display_name":"Fang Du","orcid":"https://orcid.org/0000-0002-7958-9609"},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fang Du","raw_affiliation_strings":["Ningxia Key Laboratory of Artificial Intelligence and Information Security for Channeling Computing Resources from the East to the West, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Ningxia Key Laboratory of Artificial Intelligence and Information Security for Channeling Computing Resources from the East to the West, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]},{"raw_affiliation_string":"School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000095054","display_name":"Zhenhua Yu","orcid":"https://orcid.org/0000-0001-6526-6991"},"institutions":[{"id":"https://openalex.org/I21642278","display_name":"Ningxia University","ror":"https://ror.org/04j7b2v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I21642278"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenhua Yu","raw_affiliation_strings":["Ningxia Key Laboratory of Artificial Intelligence and Information Security for Channeling Computing Resources from the East to the West, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,"],"raw_orcid":"https://orcid.org/0000-0001-6526-6991","affiliations":[{"raw_affiliation_string":"Ningxia Key Laboratory of Artificial Intelligence and Information Security for Channeling Computing Resources from the East to the West, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]},{"raw_affiliation_string":"School of Information Engineering, Ningxia University , 489 West Helan Mountain Road, Xixia District, Yinchuan 750021, Ningxia ,","institution_ids":["https://openalex.org/I21642278"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I21642278"],"apc_list":{"value":4011,"currency":"USD","value_usd":4011},"apc_paid":{"value":4011,"currency":"USD","value_usd":4011},"fwci":0.4868,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.65465705,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"26","issue":"4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9796000123023987,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9783999919891357,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.736445426940918},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.6950846314430237},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.6771953105926514},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5887025594711304},{"id":"https://openalex.org/keywords/modality","display_name":"Modality (human\u2013computer interaction)","score":0.546399712562561},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.4485286474227905},{"id":"https://openalex.org/keywords/fidelity","display_name":"Fidelity","score":0.4313647747039795},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.35316696763038635},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3401447832584381},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.14188030362129211},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12616941332817078},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0767585039138794}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.736445426940918},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.6950846314430237},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.6771953105926514},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5887025594711304},{"id":"https://openalex.org/C2780226545","wikidata":"https://www.wikidata.org/wiki/Q6888030","display_name":"Modality (human\u2013computer interaction)","level":2,"score":0.546399712562561},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.4485286474227905},{"id":"https://openalex.org/C2776459999","wikidata":"https://www.wikidata.org/wiki/Q2119376","display_name":"Fidelity","level":2,"score":0.4313647747039795},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35316696763038635},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3401447832584381},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.14188030362129211},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12616941332817078},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0767585039138794},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/bib/bbaf400","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf400","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40794946","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40794946","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:12342157","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12342157","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Brief Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/bib/bbaf400","is_oa":true,"landing_page_url":"https://doi.org/10.1093/bib/bbaf400","pdf_url":null,"source":{"id":"https://openalex.org/S91767247","display_name":"Briefings in Bioinformatics","issn_l":"1467-5463","issn":["1467-5463","1477-4054"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Briefings in Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4047386877","display_name":null,"funder_award_id":"2023BEG02009","funder_id":"https://openalex.org/F4320334010","funder_display_name":"Key Research and Development Program of Ningxia"},{"id":"https://openalex.org/G5103070055","display_name":null,"funder_award_id":"2023AAC05006","funder_id":"https://openalex.org/F4320322877","funder_display_name":"Natural Science Foundation of Ningxia Province"}],"funders":[{"id":"https://openalex.org/F4320322877","display_name":"Natural Science Foundation of Ningxia Province","ror":null},{"id":"https://openalex.org/F4320334010","display_name":"Key Research and Development Program of Ningxia","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":54,"referenced_works":["https://openalex.org/W1492083415","https://openalex.org/W1987246402","https://openalex.org/W2035618305","https://openalex.org/W2113054345","https://openalex.org/W2187089797","https://openalex.org/W2612690371","https://openalex.org/W2739492614","https://openalex.org/W2889236955","https://openalex.org/W2897249806","https://openalex.org/W2951506174","https://openalex.org/W2951821937","https://openalex.org/W2979911343","https://openalex.org/W2990138404","https://openalex.org/W2997831639","https://openalex.org/W3039883906","https://openalex.org/W3106188259","https://openalex.org/W3112600195","https://openalex.org/W3121370741","https://openalex.org/W3133082627","https://openalex.org/W3144696998","https://openalex.org/W3194509722","https://openalex.org/W3196650609","https://openalex.org/W4225278475","https://openalex.org/W4225731526","https://openalex.org/W4235169531","https://openalex.org/W4308620781","https://openalex.org/W4310895557","https://openalex.org/W4313527389","https://openalex.org/W4317884487","https://openalex.org/W4321611267","https://openalex.org/W4368361703","https://openalex.org/W4376226279","https://openalex.org/W4378649427","https://openalex.org/W4379521442","https://openalex.org/W4387473148","https://openalex.org/W4389143475","https://openalex.org/W4392167979","https://openalex.org/W4393305452","https://openalex.org/W4394011009","https://openalex.org/W4399247252","https://openalex.org/W4400893341","https://openalex.org/W4401093660","https://openalex.org/W4404399964","https://openalex.org/W4405844927","https://openalex.org/W4406366498","https://openalex.org/W4407436635","https://openalex.org/W6639824700","https://openalex.org/W6739901393","https://openalex.org/W6779823529","https://openalex.org/W6783713337","https://openalex.org/W6804510661","https://openalex.org/W6853572181","https://openalex.org/W6856130218","https://openalex.org/W6891851696"],"related_works":["https://openalex.org/W2378211422","https://openalex.org/W4321353415","https://openalex.org/W2745001401","https://openalex.org/W2130974462","https://openalex.org/W2381850946","https://openalex.org/W4380449851","https://openalex.org/W2028665553","https://openalex.org/W2086519370","https://openalex.org/W4246352526","https://openalex.org/W4385848977"],"abstract_inverted_index":{"Single-cell":[0],"multi-omics":[1,123],"technologies":[2],"enable":[3],"comprehensive":[4],"molecular":[5],"profiling,":[6],"offering":[7,115],"insights":[8],"into":[9],"cellular":[10],"heterogeneity":[11],"and":[12,24,57,76,91,112,118],"biological":[13],"mechanisms.":[14],"However,":[15],"current":[16],"cross-modality":[17,42],"translation":[18,43,79],"methods":[19,107],"struggle":[20],"with":[21,64],"high-dimensional,":[22],"noisy,":[23],"sparse":[25],"single-cell":[26,30,45,48,51,122],"data.":[27],"We":[28],"propose":[29],"Diffusion":[31],"models":[32,69,92],"for":[33,40,53,88,121],"Cross-modality":[34],"Translation":[35],"(scDCT),":[36],"a":[37,116],"probabilistic":[38,68,78],"framework":[39],"bidirectional":[41],"in":[44],"data,":[46],"including":[47],"RNA":[49],"sequencing,":[50,56],"assay":[52],"transposase-accessible":[54],"chromatin":[55],"protein":[58],"expression.":[59],"scDCT":[60,104],"integrates":[61],"modality-specific":[62],"autoencoders":[63],"conditional":[65],"denoising":[66],"diffusion":[67],"to":[70,73],"map":[71],"inputs":[72],"latent":[74],"spaces":[75],"perform":[77],"across":[80,108],"modalities.":[81],"This":[82],"design":[83],"captures":[84],"cell-type":[85],"heterogeneity,":[86],"accounts":[87],"data":[89],"sparsity,":[90],"uncertainty":[93],"during":[94],"translation.":[95],"Extensive":[96],"experiments":[97],"on":[98],"eight":[99],"benchmark":[100],"datasets":[101],"demonstrate":[102],"that":[103],"outperforms":[105],"state-of-the-art":[106],"paired,":[109],"unpaired,":[110],"cross-type,":[111],"cross-tissue":[113],"settings,":[114],"robust":[117],"interpretable":[119],"solution":[120],"integration.":[124]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
